RNA–Protein interactions for RNA: ENST00000598111.6

PDE4C-213, Transcript of phosphodiesterase 4C, humanhuman

TSL 1 (best) BASIC

Gene PDE4C, Length 1,284 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4C-213ENST00000598111 TAF7Q15545 349 aaPredicted RBP16.23■□□□□ 0.19
PDE4C-213ENST00000598111 PNISRQ8TF01 805 aaKnown RBP16.23■□□□□ 0.19
PDE4C-213ENST00000598111 RUNDC1Q96C34 613 aa16.23■□□□□ 0.19
PDE4C-213ENST00000598111 ZBTB1Q9Y2K1 713 aa16.23■□□□□ 0.19
PDE4C-213ENST00000598111 USP42Q9H9J4 1324 aaKnown RBP16.22■□□□□ 0.19
PDE4C-213ENST00000598111 KCNQ3O43525 872 aa16.22■□□□□ 0.19
PDE4C-213ENST00000598111 TMPOP42166 694 aaKnown RBP16.22■□□□□ 0.19
PDE4C-213ENST00000598111 RIPK4P57078 832 aa16.22■□□□□ 0.19
PDE4C-213ENST00000598111 NLGN1Q8N2Q7 840 aa16.22■□□□□ 0.19
PDE4C-213ENST00000598111 THUMPD2Q9BTF0 503 aaKnown RBP16.22■□□□□ 0.19
PDE4C-213ENST00000598111 KIF13BQ9NQT8 1826 aa16.22■□□□□ 0.19
PDE4C-213ENST00000598111 MMP10P09238 476 aa16.21■□□□□ 0.19
PDE4C-213ENST00000598111 GYS1P13807 737 aa16.21■□□□□ 0.19
PDE4C-213ENST00000598111 CANXP27824 592 aaKnown RBP16.21■□□□□ 0.19
PDE4C-213ENST00000598111 ADAMTS8Q9UP79 889 aa16.21■□□□□ 0.19
PDE4C-213ENST00000598111 BCORQ6W2J9 1755 aa16.21■□□□□ 0.18
PDE4C-213ENST00000598111 ZPR1O75312 459 aa16.2■□□□□ 0.18
PDE4C-213ENST00000598111 SRP68Q9UHB9 627 aaKnown RBP16.2■□□□□ 0.18
PDE4C-213ENST00000598111 RRP7AQ9Y3A4 280 aaKnown RBP16.2■□□□□ 0.18
PDE4C-213ENST00000598111 ZNF330Q9Y3S2 320 aaPredicted RBP16.2■□□□□ 0.18
PDE4C-213ENST00000598111 SNRPA1P09661 255 aaKnown RBP16.19■□□□□ 0.18
PDE4C-213ENST00000598111 NEUROD2Q15784 382 aa16.19■□□□□ 0.18
PDE4C-213ENST00000598111 NPM2Q86SE8 214 aaKnown RBP16.19■□□□□ 0.18
PDE4C-213ENST00000598111 NLGN2Q8NFZ4 835 aa16.18■□□□□ 0.18
PDE4C-213ENST00000598111 MIS18AQ9NYP9 233 aa16.18■□□□□ 0.18
PDE4C-213ENST00000598111 CD2APQ9Y5K6 639 aa16.18■□□□□ 0.18
PDE4C-213ENST00000598111 PARP3Q9Y6F1 533 aa16.18■□□□□ 0.18
PDE4C-213ENST00000598111 A0A087WZG4 1122 aa16.17■□□□□ 0.18
PDE4C-213ENST00000598111 PELP1Q8IZL8 1130 aaKnown RBP16.17■□□□□ 0.18
PDE4C-213ENST00000598111 MRS2Q9HD23 443 aa16.17■□□□□ 0.18
PDE4C-213ENST00000598111 CHD4Q14839 1912 aa16.17■□□□□ 0.18
PDE4C-213ENST00000598111 A1BGP04217 495 aa16.16■□□□□ 0.18
PDE4C-213ENST00000598111 IL6STP40189 918 aaPredicted RBP16.16■□□□□ 0.18
PDE4C-213ENST00000598111 FKBP8Q14318 412 aa16.16■□□□□ 0.18
PDE4C-213ENST00000598111 USPL1Q5W0Q7 1092 aa16.16■□□□□ 0.18
PDE4C-213ENST00000598111 NARFQ9UHQ1 456 aa16.16■□□□□ 0.18
PDE4C-213ENST00000598111 TSPYL4Q9UJ04 414 aa16.16■□□□□ 0.18
PDE4C-213ENST00000598111 AFDNP55196 1824 aaKnown RBP16.16■□□□□ 0.18
PDE4C-213ENST00000598111 C10orf71Q711Q0 1435 aa16.16■□□□□ 0.18
PDE4C-213ENST00000598111 N4BP2Q86UW6 1770 aaPredicted RBP16.15■□□□□ 0.18
PDE4C-213ENST00000598111 PRAMEF22A3QJZ6 481 aa16.15■□□□□ 0.18
PDE4C-213ENST00000598111 EIF5P55010 431 aaKnown RBP16.15■□□□□ 0.18
PDE4C-213ENST00000598111 GPR162Q16538 588 aa16.15■□□□□ 0.18
PDE4C-213ENST00000598111 KIAA1551Q9HCM1 1747 aa16.15■□□□□ 0.18
PDE4C-213ENST00000598111 USP16Q9Y5T5 823 aa16.15■□□□□ 0.18
PDE4C-213ENST00000598111 CCDC184Q52MB2 194 aa16.14■□□□□ 0.17
PDE4C-213ENST00000598111 NRXN2Q9P2S2 1712 aa16.14■□□□□ 0.17
PDE4C-213ENST00000598111 EIF4A1P60842 406 aaKnown RBP16.13■□□□□ 0.17
PDE4C-213ENST00000598111 BABAM1Q9NWV8 329 aa16.13■□□□□ 0.17
PDE4C-213ENST00000598111 PXDNLA1KZ92 1463 aa16.12■□□□□ 0.17
PDE4C-213ENST00000598111 APAF1O14727 1248 aa16.12■□□□□ 0.17
PDE4C-213ENST00000598111 PIP4K2AP48426 406 aaPredicted RBP16.12■□□□□ 0.17
PDE4C-213ENST00000598111 DDR1Q08345 913 aa16.12■□□□□ 0.17
PDE4C-213ENST00000598111 TRIM35Q9UPQ4 493 aa16.12■□□□□ 0.17
PDE4C-213ENST00000598111 BRCA1P38398 1863 aaKnown RBP16.12■□□□□ 0.17
PDE4C-213ENST00000598111 GIGYF1O75420 1035 aaPredicted RBP16.11■□□□□ 0.17
PDE4C-213ENST00000598111 DZIP3Q86Y13 1208 aaKnown RBP16.11■□□□□ 0.17
PDE4C-213ENST00000598111 TBC1D2BQ9UPU7 963 aa16.11■□□□□ 0.17
PDE4C-213ENST00000598111 LAS1LQ9Y4W2 734 aaKnown RBP16.11■□□□□ 0.17
PDE4C-213ENST00000598111 POLRMTO00411 1230 aaKnown RBP16.1■□□□□ 0.17
PDE4C-213ENST00000598111 NFIXQ14938 502 aa16.1■□□□□ 0.17
PDE4C-213ENST00000598111 BCL2L12Q9HB09 334 aa16.1■□□□□ 0.17
PDE4C-213ENST00000598111 DLEC1Q9Y238 1755 aa16.09■□□□□ 0.17
PDE4C-213ENST00000598111 CALD1Q05682 793 aaKnown RBP16.09■□□□□ 0.17
PDE4C-213ENST00000598111 BICDL1Q6ZP65 573 aa16.09■□□□□ 0.17
PDE4C-213ENST00000598111 NBPF26B4DH59 902 aa16.08■□□□□ 0.16
PDE4C-213ENST00000598111 CAMTA2O94983 1202 aa16.08■□□□□ 0.16
PDE4C-213ENST00000598111 TM4SF1P30408 202 aa16.08■□□□□ 0.16
PDE4C-213ENST00000598111 NBPF10Q6P3W6 841 aaKnown RBP16.08■□□□□ 0.16
PDE4C-213ENST00000598111 NBPF15Q8N660 670 aa16.08■□□□□ 0.16
PDE4C-213ENST00000598111 ZNF652Q9Y2D9 606 aa16.08■□□□□ 0.16
PDE4C-213ENST00000598111 CARMIL3Q8ND23 1372 aa16.08■□□□□ 0.16
PDE4C-213ENST00000598111 CHL1O00533 1208 aa16.07■□□□□ 0.16
PDE4C-213ENST00000598111 YY1P25490 414 aa16.07■□□□□ 0.16
PDE4C-213ENST00000598111 TGFB2P61812 414 aa16.07■□□□□ 0.16
PDE4C-213ENST00000598111 WWC3Q9ULE0 1092 aa16.07■□□□□ 0.16
PDE4C-213ENST00000598111 ERBB4Q15303 1308 aa16.07■□□□□ 0.16
PDE4C-213ENST00000598111 NUP98P52948 1817 aa16.07■□□□□ 0.16
PDE4C-213ENST00000598111 ARFGEF1Q9Y6D6 1849 aa16.07■□□□□ 0.16
PDE4C-213ENST00000598111 ANKRD31Q8N7Z5 1873 aa16.06■□□□□ 0.16
PDE4C-213ENST00000598111 GRIN3BO60391 1043 aa16.06■□□□□ 0.16
PDE4C-213ENST00000598111 SERPINB2P05120 415 aa16.06■□□□□ 0.16
PDE4C-213ENST00000598111 YBX3P16989 372 aaKnown RBP eCLIP16.06■□□□□ 0.16
PDE4C-213ENST00000598111 TBC1D9BQ66K14 1250 aa16.06■□□□□ 0.16
PDE4C-213ENST00000598111 NPHP1O15259 732 aa16.05■□□□□ 0.16
PDE4C-213ENST00000598111 MYL6BP14649 208 aa16.05■□□□□ 0.16
PDE4C-213ENST00000598111 EIF2S2P20042 333 aaKnown RBP16.05■□□□□ 0.16
PDE4C-213ENST00000598111 CFAP44Q96MT7 982 aa16.05■□□□□ 0.16
PDE4C-213ENST00000598111 A0A0G2JLW4 131 aa16.04■□□□□ 0.16
PDE4C-213ENST00000598111 KIF6Q6ZMV9 814 aa16.04■□□□□ 0.16
PDE4C-213ENST00000598111 NGEFQ8N5V2 710 aa16.04■□□□□ 0.16
PDE4C-213ENST00000598111 SETDB2Q96T68 719 aa16.04■□□□□ 0.16
PDE4C-213ENST00000598111 IFT57Q9NWB7 429 aa16.04■□□□□ 0.16
PDE4C-213ENST00000598111 ANKRD36CQ5JPF3 1778 aa16.04■□□□□ 0.16
PDE4C-213ENST00000598111 COL11A2P13942 1736 aaPredicted RBP16.04■□□□□ 0.16
PDE4C-213ENST00000598111 RGL2O15211 777 aa16.03■□□□□ 0.16
PDE4C-213ENST00000598111 DPEP1P16444 411 aa16.03■□□□□ 0.16
PDE4C-213ENST00000598111 GNAI1P63096 354 aa16.03■□□□□ 0.16
PDE4C-213ENST00000598111 CLEC4GQ6UXB4 293 aa16.03■□□□□ 0.16
PDE4C-213ENST00000598111 CACNA1SQ13698 1873 aa16.03■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms