RNA–Protein interactions for RNA: ENST00000597704.1

KHSRP-209, Transcript of KH-type splicing regulatory protein, humanhuman

TSL 5

Gene KHSRP, Length 706 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KHSRP-209ENST00000597704 NLGN1Q8N2Q7 840 aa21.06■□□□□ 0.96
KHSRP-209ENST00000597704 FMNL2Q96PY5 1086 aa21.06■□□□□ 0.96
KHSRP-209ENST00000597704 SRP68Q9UHB9 627 aaKnown RBP21.06■□□□□ 0.96
KHSRP-209ENST00000597704 CD2APQ9Y5K6 639 aa21.06■□□□□ 0.96
KHSRP-209ENST00000597704 MAPK8IP3Q9UPT6 1336 aa21.04■□□□□ 0.96
KHSRP-209ENST00000597704 STARD3NLO95772 234 aa21.04■□□□□ 0.96
KHSRP-209ENST00000597704 TEX13AQ9BXU3 409 aaPredicted RBP21.04■□□□□ 0.96
KHSRP-209ENST00000597704 COL15A1P39059 1388 aa21.04■□□□□ 0.96
KHSRP-209ENST00000597704 BRCA1P38398 1863 aaKnown RBP21.04■□□□□ 0.96
KHSRP-209ENST00000597704 UTRNP46939 3433 aa21.04■□□□□ 0.96
KHSRP-209ENST00000597704 ZNF316A6NFI3 1004 aaPredicted RBP21.03■□□□□ 0.96
KHSRP-209ENST00000597704 TAF7Q15545 349 aaPredicted RBP21.03■□□□□ 0.96
KHSRP-209ENST00000597704 SCN7AQ01118 1682 aa21.02■□□□□ 0.96
KHSRP-209ENST00000597704 BCORQ6W2J9 1755 aa21.02■□□□□ 0.96
KHSRP-209ENST00000597704 NRXN2Q9P2S2 1712 aa21.01■□□□□ 0.95
KHSRP-209ENST00000597704 CANXP27824 592 aaKnown RBP21.01■□□□□ 0.95
KHSRP-209ENST00000597704 FKBP8Q14318 412 aa21.01■□□□□ 0.95
KHSRP-209ENST00000597704 THUMPD2Q9BTF0 503 aaKnown RBP21.01■□□□□ 0.95
KHSRP-209ENST00000597704 GOLGB1Q14789 3259 aaKnown RBP21■□□□□ 0.95
KHSRP-209ENST00000597704 EIF5P55010 431 aaKnown RBP21■□□□□ 0.95
KHSRP-209ENST00000597704 NARFQ9UHQ1 456 aa21■□□□□ 0.95
KHSRP-209ENST00000597704 C10orf71Q711Q0 1435 aa21■□□□□ 0.95
KHSRP-209ENST00000597704 ZPR1O75312 459 aa20.99■□□□□ 0.95
KHSRP-209ENST00000597704 GPR162Q16538 588 aa20.99■□□□□ 0.95
KHSRP-209ENST00000597704 USPL1Q5W0Q7 1092 aa20.99■□□□□ 0.95
KHSRP-209ENST00000597704 MIS18AQ9NYP9 233 aa20.99■□□□□ 0.95
KHSRP-209ENST00000597704 USP16Q9Y5T5 823 aa20.99■□□□□ 0.95
KHSRP-209ENST00000597704 PRAMEF22A3QJZ6 481 aa20.98■□□□□ 0.95
KHSRP-209ENST00000597704 A1BGP04217 495 aa20.98■□□□□ 0.95
KHSRP-209ENST00000597704 TMPOP42166 694 aaKnown RBP20.98■□□□□ 0.95
KHSRP-209ENST00000597704 WDR43Q15061 677 aaKnown RBP eCLIP20.98■□□□□ 0.95
KHSRP-209ENST00000597704 SNRPA1P09661 255 aaKnown RBP20.97■□□□□ 0.95
KHSRP-209ENST00000597704 YBX3P16989 372 aaKnown RBP eCLIP20.97■□□□□ 0.95
KHSRP-209ENST00000597704 RIPK4P57078 832 aa20.97■□□□□ 0.95
KHSRP-209ENST00000597704 DDR1Q08345 913 aa20.97■□□□□ 0.95
KHSRP-209ENST00000597704 CCDC146Q8IYE0 955 aa20.97■□□□□ 0.95
KHSRP-209ENST00000597704 BCL2L12Q9HB09 334 aa20.97■□□□□ 0.95
KHSRP-209ENST00000597704 ADAMTS8Q9UP79 889 aa20.97■□□□□ 0.95
KHSRP-209ENST00000597704 PARP3Q9Y6F1 533 aa20.97■□□□□ 0.95
KHSRP-209ENST00000597704 PXDNLA1KZ92 1463 aa20.96■□□□□ 0.95
KHSRP-209ENST00000597704 YY1P25490 414 aa20.96■□□□□ 0.95
KHSRP-209ENST00000597704 TM4SF1P30408 202 aa20.96■□□□□ 0.95
KHSRP-209ENST00000597704 PELP1Q8IZL8 1130 aaKnown RBP20.96■□□□□ 0.95
KHSRP-209ENST00000597704 PNISRQ8TF01 805 aaKnown RBP20.96■□□□□ 0.95
KHSRP-209ENST00000597704 A0A087WZG4 1122 aa20.95■□□□□ 0.94
KHSRP-209ENST00000597704 IL6STP40189 918 aaPredicted RBP20.95■□□□□ 0.94
KHSRP-209ENST00000597704 RUNDC1Q96C34 613 aa20.95■□□□□ 0.94
KHSRP-209ENST00000597704 ARFGEF1Q9Y6D6 1849 aa20.94■□□□□ 0.94
KHSRP-209ENST00000597704 POLRMTO00411 1230 aaKnown RBP20.94■□□□□ 0.94
KHSRP-209ENST00000597704 RRP7AQ9Y3A4 280 aaKnown RBP20.93■□□□□ 0.94
KHSRP-209ENST00000597704 NUP98P52948 1817 aa20.92■□□□□ 0.94
KHSRP-209ENST00000597704 ANKRD31Q8N7Z5 1873 aa20.92■□□□□ 0.94
KHSRP-209ENST00000597704 PIP4K2AP48426 406 aaPredicted RBP20.92■□□□□ 0.94
KHSRP-209ENST00000597704 EIF4A1P60842 406 aaKnown RBP20.92■□□□□ 0.94
KHSRP-209ENST00000597704 NFIXQ14938 502 aa20.92■□□□□ 0.94
KHSRP-209ENST00000597704 DLEC1Q9Y238 1755 aa20.92■□□□□ 0.94
KHSRP-209ENST00000597704 TGFB2P61812 414 aa20.91■□□□□ 0.94
KHSRP-209ENST00000597704 LMOD3Q0VAK6 560 aa20.91■□□□□ 0.94
KHSRP-209ENST00000597704 TBC1D2BQ9UPU7 963 aa20.91■□□□□ 0.94
KHSRP-209ENST00000597704 ZNF330Q9Y3S2 320 aaPredicted RBP20.91■□□□□ 0.94
KHSRP-209ENST00000597704 NBPF26B4DH59 902 aa20.9■□□□□ 0.94
KHSRP-209ENST00000597704 GIGYF1O75420 1035 aaPredicted RBP20.9■□□□□ 0.94
KHSRP-209ENST00000597704 NEUROD2Q15784 382 aa20.9■□□□□ 0.94
KHSRP-209ENST00000597704 CCDC184Q52MB2 194 aa20.9■□□□□ 0.94
KHSRP-209ENST00000597704 NBPF10Q6P3W6 841 aaKnown RBP20.9■□□□□ 0.94
KHSRP-209ENST00000597704 NBPF15Q8N660 670 aa20.9■□□□□ 0.94
KHSRP-209ENST00000597704 TRIM35Q9UPQ4 493 aa20.9■□□□□ 0.94
KHSRP-209ENST00000597704 GRIN3BO60391 1043 aa20.89■□□□□ 0.93
KHSRP-209ENST00000597704 CAMTA2O94983 1202 aa20.89■□□□□ 0.93
KHSRP-209ENST00000597704 WWC3Q9ULE0 1092 aa20.88■□□□□ 0.93
KHSRP-209ENST00000597704 A0A0G2JLW4 131 aa20.87■□□□□ 0.93
KHSRP-209ENST00000597704 DPEP1P16444 411 aa20.87■□□□□ 0.93
KHSRP-209ENST00000597704 TBC1D9BQ66K14 1250 aa20.87■□□□□ 0.93
KHSRP-209ENST00000597704 DZIP3Q86Y13 1208 aaKnown RBP20.87■□□□□ 0.93
KHSRP-209ENST00000597704 BABAM1Q9NWV8 329 aa20.87■□□□□ 0.93
KHSRP-209ENST00000597704 TSPYL4Q9UJ04 414 aa20.87■□□□□ 0.93
KHSRP-209ENST00000597704 NPM2Q86SE8 214 aaKnown RBP20.86■□□□□ 0.93
KHSRP-209ENST00000597704 SERPINB2P05120 415 aa20.85■□□□□ 0.93
KHSRP-209ENST00000597704 KCNA3P22001 575 aa20.85■□□□□ 0.93
KHSRP-209ENST00000597704 BICDL1Q6ZP65 573 aa20.84■□□□□ 0.93
KHSRP-209ENST00000597704 SBF1O95248 1867 aa20.84■□□□□ 0.93
KHSRP-209ENST00000597704 CACNA1SQ13698 1873 aa20.84■□□□□ 0.93
KHSRP-209ENST00000597704 CHL1O00533 1208 aa20.83■□□□□ 0.93
KHSRP-209ENST00000597704 ANP32CO43423 234 aa20.83■□□□□ 0.93
KHSRP-209ENST00000597704 COL11A2P13942 1736 aaPredicted RBP20.83■□□□□ 0.92
KHSRP-209ENST00000597704 CARMIL3Q8ND23 1372 aa20.83■□□□□ 0.92
KHSRP-209ENST00000597704 APAF1O14727 1248 aa20.82■□□□□ 0.92
KHSRP-209ENST00000597704 CCDC88AQ3V6T2 1871 aa20.81■□□□□ 0.92
KHSRP-209ENST00000597704 CHRNA5P30532 468 aa20.81■□□□□ 0.92
KHSRP-209ENST00000597704 CLEC4GQ6UXB4 293 aa20.81■□□□□ 0.92
KHSRP-209ENST00000597704 RGL2O15211 777 aa20.8■□□□□ 0.92
KHSRP-209ENST00000597704 ZNF784Q8NCA9 323 aaPredicted RBP20.8■□□□□ 0.92
KHSRP-209ENST00000597704 BCS1LQ9Y276 419 aa20.8■□□□□ 0.92
KHSRP-209ENST00000597704 ERBB4Q15303 1308 aa20.79■□□□□ 0.92
KHSRP-209ENST00000597704 ANKRD36CQ5JPF3 1778 aa20.78■□□□□ 0.92
KHSRP-209ENST00000597704 PRR5LQ6MZQ0 368 aa20.78■□□□□ 0.92
KHSRP-209ENST00000597704 SETDB2Q96T68 719 aa20.78■□□□□ 0.92
KHSRP-209ENST00000597704 PIM2Q9P1W9 311 aa20.78■□□□□ 0.92
KHSRP-209ENST00000597704 ARFGEF2Q9Y6D5 1785 aa20.77■□□□□ 0.92
KHSRP-209ENST00000597704 MRS2Q9HD23 443 aa20.77■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms