RNA–Protein interactions for RNA: ENST00000596860.1

SNRPA-202, Transcript of small nuclear ribonucleoprotein polypeptide A, humanhuman

TSL 2

Gene SNRPA, Length 336 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA-202ENST00000596860 DDX21Q9NR30 783 aaKnown RBP eCLIP11.24□□□□□ -0.61
SNRPA-202ENST00000596860 PTPRCP08575 1304 aa11.24□□□□□ -0.61
SNRPA-202ENST00000596860 MRPL50Q8N5N7 158 aaKnown RBP11.23□□□□□ -0.61
SNRPA-202ENST00000596860 HYPKQ9NX55 129 aa11.23□□□□□ -0.61
SNRPA-202ENST00000596860 IBTKQ9P2D0 1353 aaPredicted RBP11.23□□□□□ -0.61
SNRPA-202ENST00000596860 N4BP2Q86UW6 1770 aaPredicted RBP11.23□□□□□ -0.61
SNRPA-202ENST00000596860 RGL2O15211 777 aa11.22□□□□□ -0.61
SNRPA-202ENST00000596860 KRT24Q2M2I5 525 aa11.22□□□□□ -0.61
SNRPA-202ENST00000596860 RC3H1Q5TC82 1133 aaKnown RBP11.22□□□□□ -0.61
SNRPA-202ENST00000596860 PIAS4Q8N2W9 510 aaPredicted RBP11.22□□□□□ -0.61
SNRPA-202ENST00000596860 CNTNAP4Q9C0A0 1308 aa11.22□□□□□ -0.61
SNRPA-202ENST00000596860 SMC4Q9NTJ3 1288 aa11.22□□□□□ -0.61
SNRPA-202ENST00000596860 EP400Q96L91 3159 aa11.22□□□□□ -0.61
SNRPA-202ENST00000596860 PXDNLA1KZ92 1463 aa11.21□□□□□ -0.61
SNRPA-202ENST00000596860 ELL2O00472 640 aaPredicted RBP11.21□□□□□ -0.61
SNRPA-202ENST00000596860 PTCD1O75127 700 aaKnown RBP11.21□□□□□ -0.61
SNRPA-202ENST00000596860 TRIM37O94972 964 aa11.21□□□□□ -0.61
SNRPA-202ENST00000596860 CYP19A1P11511 503 aaPredicted RBP11.21□□□□□ -0.61
SNRPA-202ENST00000596860 BAG6P46379 1132 aa11.21□□□□□ -0.61
SNRPA-202ENST00000596860 RRP1P56182 461 aaKnown RBP11.21□□□□□ -0.61
SNRPA-202ENST00000596860 PDE3AQ14432 1141 aa11.21□□□□□ -0.61
SNRPA-202ENST00000596860 SLC4A9Q96Q91 983 aa11.21□□□□□ -0.61
SNRPA-202ENST00000596860 API5Q9BZZ5 524 aaKnown RBP11.21□□□□□ -0.61
SNRPA-202ENST00000596860 MYH14Q7Z406 1995 aaKnown RBP11.21□□□□□ -0.62
SNRPA-202ENST00000596860 ATP6V1AP38606 617 aa11.2□□□□□ -0.62
SNRPA-202ENST00000596860 IL6STP40189 918 aaPredicted RBP11.2□□□□□ -0.62
SNRPA-202ENST00000596860 FAM182BQ5T319 152 aa11.2□□□□□ -0.62
SNRPA-202ENST00000596860 ZKSCAN2Q63HK3 967 aa11.2□□□□□ -0.62
SNRPA-202ENST00000596860 RBM42Q9BTD8 480 aaKnown RBP11.2□□□□□ -0.62
SNRPA-202ENST00000596860 USP16Q9Y5T5 823 aa11.2□□□□□ -0.62
SNRPA-202ENST00000596860 C4BP0C0L5 1744 aa11.19□□□□□ -0.62
SNRPA-202ENST00000596860 BCAR3O75815 825 aa11.19□□□□□ -0.62
SNRPA-202ENST00000596860 SLC4A2P04920 1241 aa11.19□□□□□ -0.62
SNRPA-202ENST00000596860 EIF2S2P20042 333 aaKnown RBP11.19□□□□□ -0.62
SNRPA-202ENST00000596860 PDIA6Q15084 440 aa11.19□□□□□ -0.62
SNRPA-202ENST00000596860 ERICH6BQ5W0A0 696 aa11.19□□□□□ -0.62
SNRPA-202ENST00000596860 ATF7IPQ6VMQ6 1270 aa11.19□□□□□ -0.62
SNRPA-202ENST00000596860 LRP10Q7Z4F1 713 aa11.19□□□□□ -0.62
SNRPA-202ENST00000596860 DEFB132Q7Z7B7 95 aa11.19□□□□□ -0.62
SNRPA-202ENST00000596860 DNAJC10Q8IXB1 793 aa11.19□□□□□ -0.62
SNRPA-202ENST00000596860 QSER1Q2KHR3 1735 aa11.18□□□□□ -0.62
SNRPA-202ENST00000596860 PRAMEF22A3QJZ6 481 aa11.18□□□□□ -0.62
SNRPA-202ENST00000596860 DDX58O95786 925 aaKnown RBP11.18□□□□□ -0.62
SNRPA-202ENST00000596860 FLIIQ13045 1269 aa11.18□□□□□ -0.62
SNRPA-202ENST00000596860 AAMPQ13685 434 aa11.18□□□□□ -0.62
SNRPA-202ENST00000596860 PTF1AQ7RTS3 328 aa11.18□□□□□ -0.62
SNRPA-202ENST00000596860 CHPF2Q9P2E5 772 aa11.18□□□□□ -0.62
SNRPA-202ENST00000596860 CCNL1Q9UK58 526 aaPredicted RBP11.18□□□□□ -0.62
SNRPA-202ENST00000596860 SUPT16HQ9Y5B9 1047 aaKnown RBP11.18□□□□□ -0.62
SNRPA-202ENST00000596860 A0A087WZG4 1122 aa11.17□□□□□ -0.62
SNRPA-202ENST00000596860 ITPK1Q13572 414 aa11.17□□□□□ -0.62
SNRPA-202ENST00000596860 CHMP4BQ9H444 224 aaKnown RBP11.17□□□□□ -0.62
SNRPA-202ENST00000596860 CCDC87Q9NVE4 849 aa11.17□□□□□ -0.62
SNRPA-202ENST00000596860 NOB1Q9ULX3 412 aaKnown RBP11.17□□□□□ -0.62
SNRPA-202ENST00000596860 ATP10DQ9P241 1426 aa11.17□□□□□ -0.62
SNRPA-202ENST00000596860 UBR3Q6ZT12 1888 aa11.17□□□□□ -0.62
SNRPA-202ENST00000596860 ABCC4O15439 1325 aa11.16□□□□□ -0.62
SNRPA-202ENST00000596860 NUP188Q5SRE5 1749 aa11.16□□□□□ -0.62
SNRPA-202ENST00000596860 NBPF26B4DH59 902 aa11.16□□□□□ -0.62
SNRPA-202ENST00000596860 APBA3O96018 575 aa11.16□□□□□ -0.62
SNRPA-202ENST00000596860 CRKLP46109 303 aaKnown RBP11.16□□□□□ -0.62
SNRPA-202ENST00000596860 EIF5P55010 431 aaKnown RBP11.16□□□□□ -0.62
SNRPA-202ENST00000596860 TXNRD1Q16881 649 aa11.16□□□□□ -0.62
SNRPA-202ENST00000596860 NBPF14Q5TI25 921 aa11.16□□□□□ -0.62
SNRPA-202ENST00000596860 NBPF10Q6P3W6 841 aaKnown RBP11.16□□□□□ -0.62
SNRPA-202ENST00000596860 DZIP1LQ8IYY4 767 aaKnown RBP11.16□□□□□ -0.62
SNRPA-202ENST00000596860 NBPF15Q8N660 670 aa11.16□□□□□ -0.62
SNRPA-202ENST00000596860 ERVV-1B6SEH8 477 aa11.15□□□□□ -0.62
SNRPA-202ENST00000596860 TRIM27P14373 513 aa11.15□□□□□ -0.62
SNRPA-202ENST00000596860 CANXP27824 592 aaKnown RBP11.15□□□□□ -0.62
SNRPA-202ENST00000596860 INTS5Q6P9B9 1019 aaKnown RBP11.15□□□□□ -0.62
SNRPA-202ENST00000596860 KSR2Q6VAB6 950 aa11.15□□□□□ -0.62
SNRPA-202ENST00000596860 BCL2L13Q9BXK5 485 aa11.15□□□□□ -0.62
SNRPA-202ENST00000596860 BCORQ6W2J9 1755 aa11.15□□□□□ -0.62
SNRPA-202ENST00000596860 ARFGEF2Q9Y6D5 1785 aa11.15□□□□□ -0.62
SNRPA-202ENST00000596860 ANKRD36CQ5JPF3 1778 aa11.14□□□□□ -0.63
SNRPA-202ENST00000596860 RPS6KA4O75676 772 aa11.14□□□□□ -0.63
SNRPA-202ENST00000596860 A1BGP04217 495 aa11.14□□□□□ -0.63
SNRPA-202ENST00000596860 NEFLP07196 543 aa11.14□□□□□ -0.63
SNRPA-202ENST00000596860 CCT4P50991 539 aaKnown RBP11.14□□□□□ -0.63
SNRPA-202ENST00000596860 FKBP5Q13451 457 aaPredicted RBP11.14□□□□□ -0.63
SNRPA-202ENST00000596860 INTS3Q68E01 1043 aaKnown RBP11.14□□□□□ -0.63
SNRPA-202ENST00000596860 NPM2Q86SE8 214 aaKnown RBP11.14□□□□□ -0.63
SNRPA-202ENST00000596860 LINC00116Q8NCU8 138 aa11.14□□□□□ -0.63
SNRPA-202ENST00000596860 PLBD2Q8NHP8 589 aa11.14□□□□□ -0.63
SNRPA-202ENST00000596860 CAMKK2Q96RR4 588 aa11.14□□□□□ -0.63
SNRPA-202ENST00000596860 ZBTB1Q9Y2K1 713 aa11.14□□□□□ -0.63
SNRPA-202ENST00000596860 NUP98P52948 1817 aa11.14□□□□□ -0.63
SNRPA-202ENST00000596860 SSFA2P28290 1259 aa11.13□□□□□ -0.63
SNRPA-202ENST00000596860 PROSER3Q2NL68 480 aa11.13□□□□□ -0.63
SNRPA-202ENST00000596860 HSP90AB3PQ58FF7 597 aa11.13□□□□□ -0.63
SNRPA-202ENST00000596860 ANKRD13DQ6ZTN6 518 aa11.13□□□□□ -0.63
SNRPA-202ENST00000596860 COPS6Q7L5N1 327 aa11.13□□□□□ -0.63
SNRPA-202ENST00000596860 G2E3Q7L622 706 aa11.13□□□□□ -0.63
SNRPA-202ENST00000596860 FTSJ3Q8IY81 847 aaKnown RBP11.13□□□□□ -0.63
SNRPA-202ENST00000596860 PROM2Q8N271 834 aa11.13□□□□□ -0.63
SNRPA-202ENST00000596860 FLAD1Q8NFF5 587 aa11.13□□□□□ -0.63
SNRPA-202ENST00000596860 FRAT1Q92837 279 aaPredicted RBP11.13□□□□□ -0.63
SNRPA-202ENST00000596860 PHAXQ9H814 394 aaKnown RBP11.13□□□□□ -0.63
SNRPA-202ENST00000596860 LRRC4BQ9NT99 713 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms