RNA–Protein interactions for RNA: ENST00000592864.2

CACNA1A-211, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 3 BASIC

Gene CACNA1A, Length 1,623 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-211ENST00000592864 TSPYL6Q8N831 410 aa17.93■□□□□ 0.46
CACNA1A-211ENST00000592864 USP16Q9Y5T5 823 aa17.93■□□□□ 0.46
CACNA1A-211ENST00000592864 C5P01031 1676 aa17.92■□□□□ 0.46
CACNA1A-211ENST00000592864 CYP19A1P11511 503 aaPredicted RBP17.92■□□□□ 0.46
CACNA1A-211ENST00000592864 ITPK1Q13572 414 aa17.92■□□□□ 0.46
CACNA1A-211ENST00000592864 RC3H1Q5TC82 1133 aaKnown RBP17.92■□□□□ 0.46
CACNA1A-211ENST00000592864 CCDC30Q5VVM6 783 aa17.92■□□□□ 0.46
CACNA1A-211ENST00000592864 CACNA1FO60840 1977 aa17.92■□□□□ 0.46
CACNA1A-211ENST00000592864 COL5A3P25940 1745 aaPredicted RBP17.91■□□□□ 0.46
CACNA1A-211ENST00000592864 EIF2S2P20042 333 aaKnown RBP17.91■□□□□ 0.46
CACNA1A-211ENST00000592864 HDGFL1Q5TGJ6 251 aa17.91■□□□□ 0.46
CACNA1A-211ENST00000592864 LRRC4BQ9NT99 713 aa17.91■□□□□ 0.46
CACNA1A-211ENST00000592864 ERBB4Q15303 1308 aa17.91■□□□□ 0.46
CACNA1A-211ENST00000592864 PRAMEF22A3QJZ6 481 aa17.9■□□□□ 0.46
CACNA1A-211ENST00000592864 RREB1Q92766 1687 aa17.89■□□□□ 0.45
CACNA1A-211ENST00000592864 KCNQ4P56696 695 aa17.89■□□□□ 0.45
CACNA1A-211ENST00000592864 LINC00116Q8NCU8 138 aa17.89■□□□□ 0.45
CACNA1A-211ENST00000592864 STK31Q9BXU1 1019 aa17.89■□□□□ 0.45
CACNA1A-211ENST00000592864 CCDC87Q9NVE4 849 aa17.89■□□□□ 0.45
CACNA1A-211ENST00000592864 CNTNAP4Q9C0A0 1308 aa17.89■□□□□ 0.45
CACNA1A-211ENST00000592864 CRKLP46109 303 aaKnown RBP17.88■□□□□ 0.45
CACNA1A-211ENST00000592864 DBF4Q9UBU7 674 aaPredicted RBP17.88■□□□□ 0.45
CACNA1A-211ENST00000592864 C4BP0C0L5 1744 aa17.87■□□□□ 0.45
CACNA1A-211ENST00000592864 ALDH1L2Q3SY69 923 aa17.87■□□□□ 0.45
CACNA1A-211ENST00000592864 NPM2Q86SE8 214 aaKnown RBP17.87■□□□□ 0.45
CACNA1A-211ENST00000592864 A1BGP04217 495 aa17.87■□□□□ 0.45
CACNA1A-211ENST00000592864 NBPF14Q5TI25 921 aa17.87■□□□□ 0.45
CACNA1A-211ENST00000592864 NECTIN2Q92692 538 aa17.87■□□□□ 0.45
CACNA1A-211ENST00000592864 AK7Q96M32 723 aa17.87■□□□□ 0.45
CACNA1A-211ENST00000592864 DDX21Q9NR30 783 aaKnown RBP eCLIP17.87■□□□□ 0.45
CACNA1A-211ENST00000592864 INTS5Q6P9B9 1019 aaKnown RBP17.86■□□□□ 0.45
CACNA1A-211ENST00000592864 HYPKQ9NX55 129 aa17.86■□□□□ 0.45
CACNA1A-211ENST00000592864 MYH14Q7Z406 1995 aaKnown RBP17.86■□□□□ 0.45
CACNA1A-211ENST00000592864 NUP188Q5SRE5 1749 aa17.85■□□□□ 0.45
CACNA1A-211ENST00000592864 IL6STP40189 918 aaPredicted RBP17.85■□□□□ 0.45
CACNA1A-211ENST00000592864 LRP5O75197 1615 aa17.85■□□□□ 0.45
CACNA1A-211ENST00000592864 RPS6KA4O75676 772 aa17.84■□□□□ 0.45
CACNA1A-211ENST00000592864 CANXP27824 592 aaKnown RBP17.84■□□□□ 0.45
CACNA1A-211ENST00000592864 STK32BQ9NY57 414 aa17.84■□□□□ 0.45
CACNA1A-211ENST00000592864 RTCBQ9Y3I0 505 aaKnown RBP17.84■□□□□ 0.45
CACNA1A-211ENST00000592864 R3HDM1Q15032 1099 aaKnown RBP17.83■□□□□ 0.45
CACNA1A-211ENST00000592864 CHPF2Q9P2E5 772 aa17.83■□□□□ 0.45
CACNA1A-211ENST00000592864 A0A087WZG4 1122 aa17.83■□□□□ 0.44
CACNA1A-211ENST00000592864 GNPATO15228 680 aa17.83■□□□□ 0.44
CACNA1A-211ENST00000592864 SLC4A2P04920 1241 aa17.83■□□□□ 0.44
CACNA1A-211ENST00000592864 RARSP54136 660 aaKnown RBP17.83■□□□□ 0.44
CACNA1A-211ENST00000592864 PDIA6Q15084 440 aa17.83■□□□□ 0.44
CACNA1A-211ENST00000592864 FLAD1Q8NFF5 587 aa17.83■□□□□ 0.44
CACNA1A-211ENST00000592864 AKT1S1Q96B36 256 aa17.83■□□□□ 0.44
CACNA1A-211ENST00000592864 ZBTB1Q9Y2K1 713 aa17.83■□□□□ 0.44
CACNA1A-211ENST00000592864 NBPF26B4DH59 902 aa17.82■□□□□ 0.44
CACNA1A-211ENST00000592864 MYL6BP14649 208 aa17.82■□□□□ 0.44
CACNA1A-211ENST00000592864 ADRA2BP18089 450 aa17.82■□□□□ 0.44
CACNA1A-211ENST00000592864 NBPF10Q6P3W6 841 aaKnown RBP17.82■□□□□ 0.44
CACNA1A-211ENST00000592864 NBPF15Q8N660 670 aa17.82■□□□□ 0.44
CACNA1A-211ENST00000592864 TFCP2L1Q9NZI6 479 aa17.82■□□□□ 0.44
CACNA1A-211ENST00000592864 EIF5P55010 431 aaKnown RBP17.81■□□□□ 0.44
CACNA1A-211ENST00000592864 BRPF1P55201 1214 aaPredicted RBP17.81■□□□□ 0.44
CACNA1A-211ENST00000592864 SLC15A2Q16348 729 aa17.81■□□□□ 0.44
CACNA1A-211ENST00000592864 SSH1Q8WYL5 1049 aa17.81■□□□□ 0.44
CACNA1A-211ENST00000592864 SMC4Q9NTJ3 1288 aa17.81■□□□□ 0.44
CACNA1A-211ENST00000592864 RCAN3Q9UKA8 241 aa17.81■□□□□ 0.44
CACNA1A-211ENST00000592864 UBR3Q6ZT12 1888 aa17.81■□□□□ 0.44
CACNA1A-211ENST00000592864 TCERG1O14776 1098 aaKnown RBP17.8■□□□□ 0.44
CACNA1A-211ENST00000592864 SSFA2P28290 1259 aa17.8■□□□□ 0.44
CACNA1A-211ENST00000592864 TRAPPC3LQ5T215 181 aa17.8■□□□□ 0.44
CACNA1A-211ENST00000592864 CENPBP07199 599 aaPredicted RBP17.8■□□□□ 0.44
CACNA1A-211ENST00000592864 MRPL50Q8N5N7 158 aaKnown RBP17.8■□□□□ 0.44
CACNA1A-211ENST00000592864 PIP4K2AP48426 406 aaPredicted RBP17.79■□□□□ 0.44
CACNA1A-211ENST00000592864 ZNF330Q9Y3S2 320 aaPredicted RBP17.79■□□□□ 0.44
CACNA1A-211ENST00000592864 QSER1Q2KHR3 1735 aa17.79■□□□□ 0.44
CACNA1A-211ENST00000592864 DDX58O95786 925 aaKnown RBP17.78■□□□□ 0.44
CACNA1A-211ENST00000592864 ZNF827Q17R98 1081 aa17.78■□□□□ 0.44
CACNA1A-211ENST00000592864 PROSER3Q2NL68 480 aa17.78■□□□□ 0.44
CACNA1A-211ENST00000592864 COL15A1P39059 1388 aa17.77■□□□□ 0.44
CACNA1A-211ENST00000592864 IPO8O15397 1037 aaKnown RBP17.77■□□□□ 0.44
CACNA1A-211ENST00000592864 ANXA1P04083 346 aa17.77■□□□□ 0.44
CACNA1A-211ENST00000592864 KIF6Q6ZMV9 814 aa17.77■□□□□ 0.44
CACNA1A-211ENST00000592864 COPS6Q7L5N1 327 aa17.77■□□□□ 0.44
CACNA1A-211ENST00000592864 LRP10Q7Z4F1 713 aa17.77■□□□□ 0.44
CACNA1A-211ENST00000592864 ARXQ96QS3 562 aa17.77■□□□□ 0.44
CACNA1A-211ENST00000592864 KIF16BQ96L93 1317 aa17.77■□□□□ 0.43
CACNA1A-211ENST00000592864 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.76■□□□□ 0.43
CACNA1A-211ENST00000592864 RFC4P35249 363 aa17.76■□□□□ 0.43
CACNA1A-211ENST00000592864 AIMP1Q12904 312 aaKnown RBP17.76■□□□□ 0.43
CACNA1A-211ENST00000592864 XAGE3Q8WTP9 111 aa17.76■□□□□ 0.43
CACNA1A-211ENST00000592864 ARHGEF1Q92888 912 aaKnown RBP17.76■□□□□ 0.43
CACNA1A-211ENST00000592864 BCL2L13Q9BXK5 485 aa17.76■□□□□ 0.43
CACNA1A-211ENST00000592864 PHAXQ9H814 394 aaKnown RBP17.76■□□□□ 0.43
CACNA1A-211ENST00000592864 PTPRCP08575 1304 aa17.76■□□□□ 0.43
CACNA1A-211ENST00000592864 ZPR1O75312 459 aa17.76■□□□□ 0.43
CACNA1A-211ENST00000592864 PHF14O94880 888 aa17.76■□□□□ 0.43
CACNA1A-211ENST00000592864 FLIIQ13045 1269 aa17.76■□□□□ 0.43
CACNA1A-211ENST00000592864 DZIP3Q86Y13 1208 aaKnown RBP17.76■□□□□ 0.43
CACNA1A-211ENST00000592864 ANO8Q9HCE9 1232 aaPredicted RBP17.76■□□□□ 0.43
CACNA1A-211ENST00000592864 TUBGCP6Q96RT7 1819 aa17.75■□□□□ 0.43
CACNA1A-211ENST00000592864 RGL2O15211 777 aa17.75■□□□□ 0.43
CACNA1A-211ENST00000592864 BCAR3O75815 825 aa17.75■□□□□ 0.43
CACNA1A-211ENST00000592864 ANKRD13DQ6ZTN6 518 aa17.75■□□□□ 0.43
CACNA1A-211ENST00000592864 ARHGAP45Q92619 1136 aa17.75■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms