RNA–Protein interactions for RNA: ENST00000592504.5

ZNF559-211, Transcript of zinc finger protein 559, humanhuman

TSL 2 BASIC

Gene ZNF559, Length 1,398 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF559-211ENST00000592504 PDE3AQ14432 1141 aa11.15□□□□□ -0.63
ZNF559-211ENST00000592504 DOK7Q18PE1 504 aa11.15□□□□□ -0.63
ZNF559-211ENST00000592504 ZKSCAN2Q63HK3 967 aa11.15□□□□□ -0.63
ZNF559-211ENST00000592504 LARP1Q6PKG0 1096 aaKnown RBP11.15□□□□□ -0.63
ZNF559-211ENST00000592504 NUTM2AQ8IVF1 878 aaPredicted RBP11.15□□□□□ -0.63
ZNF559-211ENST00000592504 CARD10Q9BWT7 1032 aa11.15□□□□□ -0.63
ZNF559-211ENST00000592504 LGR6Q9HBX8 967 aa11.15□□□□□ -0.63
ZNF559-211ENST00000592504 MEGF6O75095 1541 aa11.14□□□□□ -0.63
ZNF559-211ENST00000592504 PARP4Q9UKK3 1724 aaKnown RBP11.14□□□□□ -0.63
ZNF559-211ENST00000592504 IPO8O15397 1037 aaKnown RBP11.14□□□□□ -0.63
ZNF559-211ENST00000592504 RNMTO43148 476 aaKnown RBP11.14□□□□□ -0.63
ZNF559-211ENST00000592504 ADAMTS2O95450 1211 aa11.14□□□□□ -0.63
ZNF559-211ENST00000592504 BABAM1Q9NWV8 329 aa11.14□□□□□ -0.63
ZNF559-211ENST00000592504 TCERG1O14776 1098 aaKnown RBP11.13□□□□□ -0.63
ZNF559-211ENST00000592504 HOXB1P14653 301 aaPredicted RBP11.13□□□□□ -0.63
ZNF559-211ENST00000592504 ILDR1Q86SU0 546 aaPredicted RBP11.13□□□□□ -0.63
ZNF559-211ENST00000592504 FTSJ3Q8IY81 847 aaKnown RBP11.13□□□□□ -0.63
ZNF559-211ENST00000592504 IFNL2Q8IZJ0 200 aa11.13□□□□□ -0.63
ZNF559-211ENST00000592504 PANK1Q8TE04 598 aa11.13□□□□□ -0.63
ZNF559-211ENST00000592504 USP35Q9P2H5 1018 aa11.13□□□□□ -0.63
ZNF559-211ENST00000592504 NOB1Q9ULX3 412 aaKnown RBP11.13□□□□□ -0.63
ZNF559-211ENST00000592504 KIF16BQ96L93 1317 aa11.13□□□□□ -0.63
ZNF559-211ENST00000592504 CEMIPQ8WUJ3 1361 aa11.13□□□□□ -0.63
ZNF559-211ENST00000592504 RIMBP2O15034 1052 aa11.12□□□□□ -0.63
ZNF559-211ENST00000592504 IL2RBP14784 551 aa11.12□□□□□ -0.63
ZNF559-211ENST00000592504 PHKG2P15735 406 aa11.12□□□□□ -0.63
ZNF559-211ENST00000592504 KRT24Q2M2I5 525 aa11.12□□□□□ -0.63
ZNF559-211ENST00000592504 DZIP1LQ8IYY4 767 aaKnown RBP11.12□□□□□ -0.63
ZNF559-211ENST00000592504 CLUAP1Q96AJ1 413 aa11.12□□□□□ -0.63
ZNF559-211ENST00000592504 PLEKHG2Q9H7P9 1386 aa11.12□□□□□ -0.63
ZNF559-211ENST00000592504 PKD1L3Q7Z443 1732 aa11.11□□□□□ -0.63
ZNF559-211ENST00000592504 OVOS2A0A0G2JMS6 1433 aa11.11□□□□□ -0.63
ZNF559-211ENST00000592504 BTBD11A6QL63 1104 aa11.11□□□□□ -0.63
ZNF559-211ENST00000592504 HSP90AB1P08238 724 aaKnown RBP11.11□□□□□ -0.63
ZNF559-211ENST00000592504 MRPL50Q8N5N7 158 aaKnown RBP11.11□□□□□ -0.63
ZNF559-211ENST00000592504 ZCRB1Q8TBF4 217 aaKnown RBP11.11□□□□□ -0.63
ZNF559-211ENST00000592504 COG6Q9Y2V7 657 aa11.11□□□□□ -0.63
ZNF559-211ENST00000592504 HOXB3P14651 431 aaPredicted RBP11.1□□□□□ -0.63
ZNF559-211ENST00000592504 ATF7IPQ6VMQ6 1270 aa11.1□□□□□ -0.63
ZNF559-211ENST00000592504 RNF166Q96A37 237 aaPredicted RBP11.1□□□□□ -0.63
ZNF559-211ENST00000592504 TNNQ9UQP3 1299 aa11.1□□□□□ -0.63
ZNF559-211ENST00000592504 SCN11AQ9UI33 1791 aa11.1□□□□□ -0.63
ZNF559-211ENST00000592504 PLCH1Q4KWH8 1693 aa11.1□□□□□ -0.63
ZNF559-211ENST00000592504 PCDH11XQ9BZA7 1347 aa11.09□□□□□ -0.63
ZNF559-211ENST00000592504 PCDH11YQ9BZA8 1340 aa11.09□□□□□ -0.63
ZNF559-211ENST00000592504 CYP27B1O15528 508 aa11.09□□□□□ -0.63
ZNF559-211ENST00000592504 TRIM27P14373 513 aa11.09□□□□□ -0.63
ZNF559-211ENST00000592504 BRPF1P55201 1214 aaPredicted RBP11.09□□□□□ -0.63
ZNF559-211ENST00000592504 DCAF5Q96JK2 942 aa11.09□□□□□ -0.63
ZNF559-211ENST00000592504 KDM3BQ7LBC6 1761 aa11.08□□□□□ -0.64
ZNF559-211ENST00000592504 JCADQ9P266 1359 aa11.08□□□□□ -0.64
ZNF559-211ENST00000592504 RLBP1P12271 317 aa11.08□□□□□ -0.64
ZNF559-211ENST00000592504 DDX54Q8TDD1 881 aaKnown RBP11.08□□□□□ -0.64
ZNF559-211ENST00000592504 STK31Q9BXU1 1019 aa11.08□□□□□ -0.64
ZNF559-211ENST00000592504 CIZ1Q9ULV3 898 aaPredicted RBP11.08□□□□□ -0.64
ZNF559-211ENST00000592504 ADAMTS7Q9UKP4 1686 aa11.07□□□□□ -0.64
ZNF559-211ENST00000592504 SOS1Q07889 1333 aaPredicted RBP11.07□□□□□ -0.64
ZNF559-211ENST00000592504 CABP4P57796 275 aa11.07□□□□□ -0.64
ZNF559-211ENST00000592504 MVPQ14764 893 aaKnown RBP11.07□□□□□ -0.64
ZNF559-211ENST00000592504 CCDC30Q5VVM6 783 aa11.07□□□□□ -0.64
ZNF559-211ENST00000592504 ITPRIPQ8IWB1 547 aa11.07□□□□□ -0.64
ZNF559-211ENST00000592504 ARHGAP45Q92619 1136 aa11.07□□□□□ -0.64
ZNF559-211ENST00000592504 NECTIN2Q92692 538 aa11.07□□□□□ -0.64
ZNF559-211ENST00000592504 API5Q9BZZ5 524 aaKnown RBP11.07□□□□□ -0.64
ZNF559-211ENST00000592504 SLC52A2Q9HAB3 445 aa11.07□□□□□ -0.64
ZNF559-211ENST00000592504 CCDC9Q9Y3X0 531 aaKnown RBP11.07□□□□□ -0.64
ZNF559-211ENST00000592504 SIPA1L3O60292 1781 aaPredicted RBP11.07□□□□□ -0.64
ZNF559-211ENST00000592504 KDM6AO15550 1401 aaPredicted RBP11.07□□□□□ -0.64
ZNF559-211ENST00000592504 KCNQ3O43525 872 aa11.06□□□□□ -0.64
ZNF559-211ENST00000592504 EIF4A1P60842 406 aaKnown RBP11.06□□□□□ -0.64
ZNF559-211ENST00000592504 NFATC2IPQ8NCF5 419 aa11.06□□□□□ -0.64
ZNF559-211ENST00000592504 CHMP4AQ9BY43 222 aa11.06□□□□□ -0.64
ZNF559-211ENST00000592504 EIF2S2P20042 333 aaKnown RBP11.05□□□□□ -0.64
ZNF559-211ENST00000592504 AAMPQ13685 434 aa11.05□□□□□ -0.64
ZNF559-211ENST00000592504 HDGFL1Q5TGJ6 251 aa11.05□□□□□ -0.64
ZNF559-211ENST00000592504 TMEM57Q8N5G2 664 aa11.05□□□□□ -0.64
ZNF559-211ENST00000592504 NGLY1Q96IV0 654 aa11.05□□□□□ -0.64
ZNF559-211ENST00000592504 C8orf37Q96NL8 207 aa11.05□□□□□ -0.64
ZNF559-211ENST00000592504 DDX19BQ9UMR2 479 aa11.05□□□□□ -0.64
ZNF559-211ENST00000592504 NRAPQ86VF7 1730 aa11.05□□□□□ -0.64
ZNF559-211ENST00000592504 NWD2Q9ULI1 1742 aa11.05□□□□□ -0.64
ZNF559-211ENST00000592504 TTC5Q8N0Z6 440 aa11.04□□□□□ -0.64
ZNF559-211ENST00000592504 CACNA1FO60840 1977 aa11.04□□□□□ -0.64
ZNF559-211ENST00000592504 PTPRCP08575 1304 aa11.04□□□□□ -0.64
ZNF559-211ENST00000592504 SPATA31A6Q5VVP1 1343 aa11.04□□□□□ -0.64
ZNF559-211ENST00000592504 EXOC5O00471 708 aa11.03□□□□□ -0.64
ZNF559-211ENST00000592504 HOXB7P09629 217 aa11.03□□□□□ -0.64
ZNF559-211ENST00000592504 HSPA1LP34931 641 aa11.03□□□□□ -0.64
ZNF559-211ENST00000592504 SLC39A6Q13433 755 aa11.03□□□□□ -0.64
ZNF559-211ENST00000592504 VARS2Q5ST30 1063 aaKnown RBP11.03□□□□□ -0.64
ZNF559-211ENST00000592504 MEX3CQ5U5Q3 659 aaKnown RBP11.03□□□□□ -0.64
ZNF559-211ENST00000592504 SHANK3Q9BYB0 1731 aa11.03□□□□□ -0.64
ZNF559-211ENST00000592504 CHMP4BQ9H444 224 aaKnown RBP11.03□□□□□ -0.64
ZNF559-211ENST00000592504 SPATA31A1Q5TZJ5 1347 aa11.03□□□□□ -0.64
ZNF559-211ENST00000592504 WNK3Q9BYP7 1800 aa11.03□□□□□ -0.64
ZNF559-211ENST00000592504 ERVV-2B6SEH9 535 aa11.03□□□□□ -0.64
ZNF559-211ENST00000592504 NKX1-1Q15270 411 aaPredicted RBP11.03□□□□□ -0.64
ZNF559-211ENST00000592504 ZNF790Q6PG37 636 aa11.03□□□□□ -0.64
ZNF559-211ENST00000592504 CDCA7Q9BWT1 371 aaPredicted RBP11.03□□□□□ -0.64
ZNF559-211ENST00000592504 THRAP3Q9Y2W1 955 aaKnown RBP11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 76.4 ms