RNA–Protein interactions for RNA: ENST00000592158.1

SMARCA4-218, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 2

Gene SMARCA4, Length 409 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-218ENST00000592158 OTUD5Q96G74 571 aa13.04□□□□□ -0.32
SMARCA4-218ENST00000592158 SAGE1Q9NXZ1 904 aa13.04□□□□□ -0.32
SMARCA4-218ENST00000592158 RANBP2P49792 3224 aaKnown RBP13.03□□□□□ -0.32
SMARCA4-218ENST00000592158 NOGQ13253 232 aa13.03□□□□□ -0.32
SMARCA4-218ENST00000592158 FKBP8Q14318 412 aa13.03□□□□□ -0.32
SMARCA4-218ENST00000592158 PIGBQ92521 554 aa13.03□□□□□ -0.32
SMARCA4-218ENST00000592158 HHIPL1Q96JK4 782 aa13.03□□□□□ -0.32
SMARCA4-218ENST00000592158 POLRMTO00411 1230 aaKnown RBP13.02□□□□□ -0.33
SMARCA4-218ENST00000592158 TAOK3Q9H2K8 898 aa13.02□□□□□ -0.33
SMARCA4-218ENST00000592158 RNF123Q5XPI4 1314 aa13.02□□□□□ -0.33
SMARCA4-218ENST00000592158 TTC21AQ8NDW8 1320 aa13.02□□□□□ -0.33
SMARCA4-218ENST00000592158 C21orf2O43822 256 aa13.01□□□□□ -0.33
SMARCA4-218ENST00000592158 TRPA1O75762 1119 aa13.01□□□□□ -0.33
SMARCA4-218ENST00000592158 LTBP3Q9NS15 1303 aa13.01□□□□□ -0.33
SMARCA4-218ENST00000592158 AKAP11Q9UKA4 1901 aa13.01□□□□□ -0.33
SMARCA4-218ENST00000592158 RGPD2P0DJD1 1756 aa13□□□□□ -0.33
SMARCA4-218ENST00000592158 C2CD5Q86YS7 1000 aa13□□□□□ -0.33
SMARCA4-218ENST00000592158 SRP68Q9UHB9 627 aaKnown RBP13□□□□□ -0.33
SMARCA4-218ENST00000592158 VCANP13611 3396 aa13□□□□□ -0.33
SMARCA4-218ENST00000592158 ZNF541Q9H0D2 1346 aa12.99□□□□□ -0.33
SMARCA4-218ENST00000592158 POTEFA5A3E0 1075 aa12.99□□□□□ -0.33
SMARCA4-218ENST00000592158 RNF186Q9NXI6 227 aa12.99□□□□□ -0.33
SMARCA4-218ENST00000592158 BRCA2P51587 3418 aa12.98□□□□□ -0.33
SMARCA4-218ENST00000592158 INSRP06213 1382 aa12.98□□□□□ -0.33
SMARCA4-218ENST00000592158 USP31Q70CQ4 1352 aa12.98□□□□□ -0.33
SMARCA4-218ENST00000592158 AFDNP55196 1824 aaKnown RBP12.98□□□□□ -0.33
SMARCA4-218ENST00000592158 RPS6KA4O75676 772 aa12.98□□□□□ -0.33
SMARCA4-218ENST00000592158 CELF2O95319 508 aaKnown RBP12.98□□□□□ -0.33
SMARCA4-218ENST00000592158 PLA2G5P39877 138 aa12.98□□□□□ -0.33
SMARCA4-218ENST00000592158 CHRDL2Q6WN34 429 aa12.98□□□□□ -0.33
SMARCA4-218ENST00000592158 BICDL1Q6ZP65 573 aa12.98□□□□□ -0.33
SMARCA4-218ENST00000592158 SCN11AQ9UI33 1791 aa12.98□□□□□ -0.33
SMARCA4-218ENST00000592158 SMG6Q86US8 1419 aaKnown RBP12.97□□□□□ -0.33
SMARCA4-218ENST00000592158 KIAA0100Q14667 2235 aaKnown RBP12.97□□□□□ -0.33
SMARCA4-218ENST00000592158 H0YIN7 160 aa12.97□□□□□ -0.33
SMARCA4-218ENST00000592158 TM4SF1P30408 202 aa12.97□□□□□ -0.33
SMARCA4-218ENST00000592158 ASAP1Q9ULH1 1129 aa12.97□□□□□ -0.33
SMARCA4-218ENST00000592158 RC3H1Q5TC82 1133 aaKnown RBP12.96□□□□□ -0.33
SMARCA4-218ENST00000592158 SYNE4Q8N205 404 aa12.96□□□□□ -0.33
SMARCA4-218ENST00000592158 IP6K1Q92551 441 aa12.96□□□□□ -0.33
SMARCA4-218ENST00000592158 ZNF692Q9BU19 519 aaPredicted RBP12.96□□□□□ -0.33
SMARCA4-218ENST00000592158 RBM27Q9P2N5 1060 aaKnown RBP12.96□□□□□ -0.33
SMARCA4-218ENST00000592158 HDAC9Q9UKV0 1011 aa12.96□□□□□ -0.33
SMARCA4-218ENST00000592158 CGNL1Q0VF96 1302 aa12.95□□□□□ -0.34
SMARCA4-218ENST00000592158 PCDH11XQ9BZA7 1347 aa12.95□□□□□ -0.34
SMARCA4-218ENST00000592158 PCDH11YQ9BZA8 1340 aa12.95□□□□□ -0.34
SMARCA4-218ENST00000592158 H0YGN5 161 aa12.95□□□□□ -0.34
SMARCA4-218ENST00000592158 FBXO46Q6PJ61 603 aaPredicted RBP12.95□□□□□ -0.34
SMARCA4-218ENST00000592158 RAPGEFL1Q9UHV5 662 aa12.95□□□□□ -0.34
SMARCA4-218ENST00000592158 USP42Q9H9J4 1324 aaKnown RBP12.94□□□□□ -0.34
SMARCA4-218ENST00000592158 CD163L1Q9NR16 1453 aa12.94□□□□□ -0.34
SMARCA4-218ENST00000592158 ZNF622Q969S3 477 aaKnown RBP eCLIP12.94□□□□□ -0.341e-11■□□□□ 10.7
SMARCA4-218ENST00000592158 FAM122AQ96E09 287 aa12.94□□□□□ -0.34
SMARCA4-218ENST00000592158 MYH14Q7Z406 1995 aaKnown RBP12.94□□□□□ -0.34
SMARCA4-218ENST00000592158 CACNA1AO00555 2505 aa12.94□□□□□ -0.34
SMARCA4-218ENST00000592158 PAPPA2Q9BXP8 1791 aa12.94□□□□□ -0.34
SMARCA4-218ENST00000592158 CNTNAP4Q9C0A0 1308 aa12.93□□□□□ -0.34
SMARCA4-218ENST00000592158 HOXD11P31277 338 aaPredicted RBP12.93□□□□□ -0.34
SMARCA4-218ENST00000592158 RAPGEF4Q8WZA2 1011 aa12.93□□□□□ -0.34
SMARCA4-218ENST00000592158 KDM2AQ9Y2K7 1162 aa12.93□□□□□ -0.34
SMARCA4-218ENST00000592158 CENPFP49454 3210 aa12.93□□□□□ -0.34
SMARCA4-218ENST00000592158 SPTBN5Q9NRC6 3674 aaKnown RBP12.92□□□□□ -0.34
SMARCA4-218ENST00000592158 CYP27B1O15528 508 aa12.92□□□□□ -0.34
SMARCA4-218ENST00000592158 KIF23Q02241 960 aaPredicted RBP12.92□□□□□ -0.34
SMARCA4-218ENST00000592158 CCDC24Q8N4L8 307 aa12.92□□□□□ -0.34
SMARCA4-218ENST00000592158 COL5A3P25940 1745 aaPredicted RBP12.91□□□□□ -0.34
SMARCA4-218ENST00000592158 TATP17735 454 aaPredicted RBP12.91□□□□□ -0.34
SMARCA4-218ENST00000592158 ZNF408Q9H9D4 720 aa12.91□□□□□ -0.34
SMARCA4-218ENST00000592158 NRXN2Q9P2S2 1712 aa12.91□□□□□ -0.34
SMARCA4-218ENST00000592158 PHF6Q8IWS0 365 aaKnown RBP eCLIP12.9□□□□□ -0.34
SMARCA4-218ENST00000592158 SNX27Q96L92 541 aa12.9□□□□□ -0.34
SMARCA4-218ENST00000592158 SLC4A9Q96Q91 983 aa12.9□□□□□ -0.34
SMARCA4-218ENST00000592158 ATG3Q9NT62 314 aa12.9□□□□□ -0.34
SMARCA4-218ENST00000592158 TMOD3Q9NYL9 352 aa12.9□□□□□ -0.34
SMARCA4-218ENST00000592158 RBBP6Q7Z6E9 1792 aaKnown RBP12.89□□□□□ -0.35
SMARCA4-218ENST00000592158 HTTP42858 3142 aa12.89□□□□□ -0.35
SMARCA4-218ENST00000592158 EN2P19622 333 aaPredicted RBP12.89□□□□□ -0.35
SMARCA4-218ENST00000592158 PPARGC1BQ86YN6 1023 aaKnown RBP12.89□□□□□ -0.35
SMARCA4-218ENST00000592158 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.89□□□□□ -0.353e-7■■■■□ 26.2
SMARCA4-218ENST00000592158 GPC2Q8N158 579 aa12.89□□□□□ -0.35
SMARCA4-218ENST00000592158 USHBP1Q8N6Y0 703 aa12.89□□□□□ -0.35
SMARCA4-218ENST00000592158 KDRP35968 1356 aa12.89□□□□□ -0.35
SMARCA4-218ENST00000592158 MAP3K19Q56UN5 1328 aa12.88□□□□□ -0.35
SMARCA4-218ENST00000592158 FAM155AB1AL88 458 aaPredicted RBP12.88□□□□□ -0.35
SMARCA4-218ENST00000592158 LMOD1P29536 600 aaPredicted RBP12.88□□□□□ -0.35
SMARCA4-218ENST00000592158 HUNKP57058 714 aa12.88□□□□□ -0.35
SMARCA4-218ENST00000592158 INTS3Q68E01 1043 aaKnown RBP12.88□□□□□ -0.35
SMARCA4-218ENST00000592158 ZNF296Q8WUU4 475 aaPredicted RBP12.88□□□□□ -0.35
SMARCA4-218ENST00000592158 CARMIL3Q8ND23 1372 aa12.88□□□□□ -0.35
SMARCA4-218ENST00000592158 CACNA1SQ13698 1873 aa12.88□□□□□ -0.35
SMARCA4-218ENST00000592158 LAMA3Q16787 3333 aa12.88□□□□□ -0.35
SMARCA4-218ENST00000592158 KTN1Q86UP2 1357 aaKnown RBP12.87□□□□□ -0.35
SMARCA4-218ENST00000592158 SERPINB2P05120 415 aa12.87□□□□□ -0.35
SMARCA4-218ENST00000592158 NBPF6Q5VWK0 638 aa12.87□□□□□ -0.35
SMARCA4-218ENST00000592158 USP50Q70EL3 339 aaPredicted RBP12.87□□□□□ -0.35
SMARCA4-218ENST00000592158 NME9Q86XW9 330 aa12.87□□□□□ -0.35
SMARCA4-218ENST00000592158 NBPF4Q96M43 638 aa12.87□□□□□ -0.35
SMARCA4-218ENST00000592158 RBM42Q9BTD8 480 aaKnown RBP12.87□□□□□ -0.35
SMARCA4-218ENST00000592158 STXBP5LQ9Y2K9 1186 aa12.87□□□□□ -0.35
SMARCA4-218ENST00000592158 SLX4Q8IY92 1834 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms