RNA–Protein interactions for RNA: ENST00000591028.1

NFIX-213, Transcript of nuclear factor I X, humanhuman

TSL 3

Gene NFIX, Length 582 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFIX-213ENST00000591028 C10orf71Q711Q0 1435 aa20.88■□□□□ 0.93
NFIX-213ENST00000591028 PTCD1O75127 700 aaKnown RBP20.88■□□□□ 0.93
NFIX-213ENST00000591028 ZNF526Q8TF50 670 aaPredicted RBP20.88■□□□□ 0.93
NFIX-213ENST00000591028 ADAMTS7Q9UKP4 1686 aa20.87■□□□□ 0.93
NFIX-213ENST00000591028 TRAPPC3LQ5T215 181 aa20.87■□□□□ 0.93
NFIX-213ENST00000591028 ARHGEF1Q92888 912 aaKnown RBP20.87■□□□□ 0.93
NFIX-213ENST00000591028 SLC52A2Q9HAB3 445 aa20.87■□□□□ 0.93
NFIX-213ENST00000591028 NFATC2IPQ8NCF5 419 aa20.86■□□□□ 0.93
NFIX-213ENST00000591028 APAF1O14727 1248 aa20.85■□□□□ 0.93
NFIX-213ENST00000591028 GYS1P13807 737 aa20.85■□□□□ 0.93
NFIX-213ENST00000591028 CCDC27Q2M243 656 aa20.85■□□□□ 0.93
NFIX-213ENST00000591028 RC3H1Q5TC82 1133 aaKnown RBP20.85■□□□□ 0.93
NFIX-213ENST00000591028 RPS6KA4O75676 772 aa20.84■□□□□ 0.93
NFIX-213ENST00000591028 ADRA2BP18089 450 aa20.84■□□□□ 0.93
NFIX-213ENST00000591028 BABAM1Q9NWV8 329 aa20.84■□□□□ 0.93
NFIX-213ENST00000591028 RFC4P35249 363 aa20.83■□□□□ 0.93
NFIX-213ENST00000591028 CRKLP46109 303 aaKnown RBP20.83■□□□□ 0.93
NFIX-213ENST00000591028 GPBP1L1Q9HC44 474 aaPredicted RBP20.83■□□□□ 0.93
NFIX-213ENST00000591028 NLGN1Q8N2Q7 840 aa20.82■□□□□ 0.92
NFIX-213ENST00000591028 IL17REQ8NFR9 667 aa20.82■□□□□ 0.92
NFIX-213ENST00000591028 SRP68Q9UHB9 627 aaKnown RBP20.82■□□□□ 0.92
NFIX-213ENST00000591028 A0A0G2JLW4 131 aa20.81■□□□□ 0.92
NFIX-213ENST00000591028 NEUROD2Q15784 382 aa20.81■□□□□ 0.92
NFIX-213ENST00000591028 TTC5Q8N0Z6 440 aa20.81■□□□□ 0.92
NFIX-213ENST00000591028 LGR6Q9HBX8 967 aa20.81■□□□□ 0.92
NFIX-213ENST00000591028 KCPQ6ZWJ8 1503 aa20.8■□□□□ 0.92
NFIX-213ENST00000591028 TAF7Q15545 349 aaPredicted RBP20.8■□□□□ 0.92
NFIX-213ENST00000591028 MCM10Q7L590 875 aa20.8■□□□□ 0.92
NFIX-213ENST00000591028 ARFGEF1Q9Y6D6 1849 aa20.8■□□□□ 0.92
NFIX-213ENST00000591028 CCDC87Q9NVE4 849 aa20.79■□□□□ 0.92
NFIX-213ENST00000591028 BCS1LQ9Y276 419 aa20.79■□□□□ 0.92
NFIX-213ENST00000591028 RRP7AQ9Y3A4 280 aaKnown RBP20.79■□□□□ 0.92
NFIX-213ENST00000591028 UBR2Q8IWV8 1755 aa20.79■□□□□ 0.92
NFIX-213ENST00000591028 USP42Q9H9J4 1324 aaKnown RBP20.78■□□□□ 0.92
NFIX-213ENST00000591028 DPEP1P16444 411 aa20.78■□□□□ 0.92
NFIX-213ENST00000591028 PARP3Q9Y6F1 533 aa20.78■□□□□ 0.92
NFIX-213ENST00000591028 BTBD11A6QL63 1104 aa20.77■□□□□ 0.92
NFIX-213ENST00000591028 TGFB2P61812 414 aa20.77■□□□□ 0.92
NFIX-213ENST00000591028 FKBP8Q14318 412 aa20.77■□□□□ 0.92
NFIX-213ENST00000591028 DNAJC10Q8IXB1 793 aa20.77■□□□□ 0.92
NFIX-213ENST00000591028 DDR1Q08345 913 aa20.76■□□□□ 0.91
NFIX-213ENST00000591028 SLC39A6Q13433 755 aa20.76■□□□□ 0.91
NFIX-213ENST00000591028 TRIM35Q9UPQ4 493 aa20.76■□□□□ 0.91
NFIX-213ENST00000591028 AFDNP55196 1824 aaKnown RBP20.76■□□□□ 0.91
NFIX-213ENST00000591028 IL16Q14005 1332 aa20.76■□□□□ 0.91
NFIX-213ENST00000591028 DLG5Q8TDM6 1919 aa20.75■□□□□ 0.91
NFIX-213ENST00000591028 INTS5Q6P9B9 1019 aaKnown RBP20.75■□□□□ 0.91
NFIX-213ENST00000591028 ZNF790Q6PG37 636 aa20.75■□□□□ 0.91
NFIX-213ENST00000591028 GNAI1P63096 354 aa20.74■□□□□ 0.91
NFIX-213ENST00000591028 DCTN1Q14203 1278 aa20.74■□□□□ 0.91
NFIX-213ENST00000591028 WDR63Q8IWG1 891 aa20.74■□□□□ 0.91
NFIX-213ENST00000591028 VSIG10Q8N0Z9 540 aa20.74■□□□□ 0.91
NFIX-213ENST00000591028 SIPA1L3O60292 1781 aaPredicted RBP20.73■□□□□ 0.91
NFIX-213ENST00000591028 WWC1Q8IX03 1113 aa20.73■□□□□ 0.91
NFIX-213ENST00000591028 CFAP44Q96MT7 982 aa20.73■□□□□ 0.91
NFIX-213ENST00000591028 FMNL2Q96PY5 1086 aa20.73■□□□□ 0.91
NFIX-213ENST00000591028 TEX13AQ9BXU3 409 aaPredicted RBP20.73■□□□□ 0.91
NFIX-213ENST00000591028 CHMP4AQ9BY43 222 aa20.73■□□□□ 0.91
NFIX-213ENST00000591028 IFT57Q9NWB7 429 aa20.73■□□□□ 0.91
NFIX-213ENST00000591028 ARHGAP27Q6ZUM4 889 aa20.72■□□□□ 0.91
NFIX-213ENST00000591028 TSPYL4Q9UJ04 414 aa20.72■□□□□ 0.91
NFIX-213ENST00000591028 SOS1Q07889 1333 aaPredicted RBP20.72■□□□□ 0.91
NFIX-213ENST00000591028 KCNA3P22001 575 aa20.71■□□□□ 0.91
NFIX-213ENST00000591028 COL15A1P39059 1388 aa20.71■□□□□ 0.91
NFIX-213ENST00000591028 KIF3CO14782 793 aa20.7■□□□□ 0.9
NFIX-213ENST00000591028 CYP19A1P11511 503 aaPredicted RBP20.7■□□□□ 0.9
NFIX-213ENST00000591028 USPL1Q5W0Q7 1092 aa20.7■□□□□ 0.9
NFIX-213ENST00000591028 ZBTB1Q9Y2K1 713 aa20.7■□□□□ 0.9
NFIX-213ENST00000591028 NRXN2Q9P2S2 1712 aa20.7■□□□□ 0.9
NFIX-213ENST00000591028 POLRMTO00411 1230 aaKnown RBP20.69■□□□□ 0.9
NFIX-213ENST00000591028 CHRNA5P30532 468 aa20.69■□□□□ 0.9
NFIX-213ENST00000591028 THUMPD2Q9BTF0 503 aaKnown RBP20.69■□□□□ 0.9
NFIX-213ENST00000591028 MYH16Q9H6N6 1097 aa20.69■□□□□ 0.9
NFIX-213ENST00000591028 DLEC1Q9Y238 1755 aa20.69■□□□□ 0.9
NFIX-213ENST00000591028 CHL1O00533 1208 aa20.68■□□□□ 0.9
NFIX-213ENST00000591028 SCN7AQ01118 1682 aa20.67■□□□□ 0.9
NFIX-213ENST00000591028 SBF1O95248 1867 aa20.67■□□□□ 0.9
NFIX-213ENST00000591028 ZPR1O75312 459 aa20.67■□□□□ 0.9
NFIX-213ENST00000591028 HSPA6P17066 643 aa20.67■□□□□ 0.9
NFIX-213ENST00000591028 HEG1Q9ULI3 1381 aa20.67■□□□□ 0.9
NFIX-213ENST00000591028 STARD3NLO95772 234 aa20.66■□□□□ 0.9
NFIX-213ENST00000591028 HOXB7P09629 217 aa20.65■□□□□ 0.9
NFIX-213ENST00000591028 SNRPA1P09661 255 aaKnown RBP20.65■□□□□ 0.9
NFIX-213ENST00000591028 TM4SF1P30408 202 aa20.65■□□□□ 0.9
NFIX-213ENST00000591028 PIM2Q9P1W9 311 aa20.65■□□□□ 0.9
NFIX-213ENST00000591028 LAS1LQ9Y4W2 734 aaKnown RBP20.65■□□□□ 0.9
NFIX-213ENST00000591028 ZBED9Q6R2W3 1325 aa20.64■□□□□ 0.89
NFIX-213ENST00000591028 ZNF853P0CG23 659 aa20.64■□□□□ 0.89
NFIX-213ENST00000591028 HNRNPUQ00839 825 aaKnown RBP eCLIP20.64■□□□□ 0.89
NFIX-213ENST00000591028 GOLGA2Q08379 1002 aa20.64■□□□□ 0.89
NFIX-213ENST00000591028 NFIXQ14938 502 aa20.64■□□□□ 0.89
NFIX-213ENST00000591028 DALRD3Q5D0E6 543 aaKnown RBP20.64■□□□□ 0.89
NFIX-213ENST00000591028 C9orf131Q5VYM1 1079 aa20.64■□□□□ 0.89
NFIX-213ENST00000591028 ZNF496Q96IT1 587 aaPredicted RBP20.64■□□□□ 0.89
NFIX-213ENST00000591028 E9PSI1 815 aa20.63■□□□□ 0.89
NFIX-213ENST00000591028 BCL2L12Q9HB09 334 aa20.63■□□□□ 0.89
NFIX-213ENST00000591028 NMRK2Q9NPI5 230 aa20.63■□□□□ 0.89
NFIX-213ENST00000591028 NARFQ9UHQ1 456 aa20.63■□□□□ 0.89
NFIX-213ENST00000591028 SALL2Q9Y467 1007 aaPredicted RBP20.63■□□□□ 0.89
NFIX-213ENST00000591028 ANKRD31Q8N7Z5 1873 aa20.62■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms