RNA–Protein interactions for RNA: ENST00000590619.1

DNMT1-222, Transcript of DNA methyltransferase 1, humanhuman

TSL 1 (best)

Gene DNMT1, Length 231 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-222ENST00000590619 NFIXQ14938 502 aa9.18□□□□□ -0.94
DNMT1-222ENST00000590619 EAPPQ56P03 285 aaPredicted RBP9.18□□□□□ -0.94
DNMT1-222ENST00000590619 USPL1Q5W0Q7 1092 aa9.18□□□□□ -0.94
DNMT1-222ENST00000590619 MAP1SQ66K74 1059 aaPredicted RBP9.18□□□□□ -0.94
DNMT1-222ENST00000590619 VIRMAQ69YN4 1812 aaKnown RBP9.18□□□□□ -0.94
DNMT1-222ENST00000590619 L3MBTL3Q96JM7 780 aaPredicted RBP9.18□□□□□ -0.94
DNMT1-222ENST00000590619 CAPNS2Q96L46 248 aa9.18□□□□□ -0.94
DNMT1-222ENST00000590619 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.18□□□□□ -0.94
DNMT1-222ENST00000590619 ZNF219Q9P2Y4 722 aaPredicted RBP9.18□□□□□ -0.94
DNMT1-222ENST00000590619 ABT1Q9ULW3 272 aaKnown RBP9.18□□□□□ -0.94
DNMT1-222ENST00000590619 INSRP06213 1382 aa9.17□□□□□ -0.94
DNMT1-222ENST00000590619 FYB1O15117 783 aa9.17□□□□□ -0.94
DNMT1-222ENST00000590619 SERPINB2P05120 415 aa9.17□□□□□ -0.94
DNMT1-222ENST00000590619 DGKZQ13574 1117 aa9.17□□□□□ -0.94
DNMT1-222ENST00000590619 CYP4F22Q6NT55 531 aa9.17□□□□□ -0.94
DNMT1-222ENST00000590619 INTS5Q6P9B9 1019 aaKnown RBP9.17□□□□□ -0.94
DNMT1-222ENST00000590619 RTL1A6NKG5 1358 aa9.16□□□□□ -0.94
DNMT1-222ENST00000590619 ERVV-2B6SEH9 535 aa9.16□□□□□ -0.94
DNMT1-222ENST00000590619 ZPR1O75312 459 aa9.16□□□□□ -0.94
DNMT1-222ENST00000590619 FMR1Q06787 632 aaKnown RBP eCLIP9.16□□□□□ -0.942e-8■■■■■ 29.9
DNMT1-222ENST00000590619 ZNF622Q969S3 477 aaKnown RBP eCLIP9.16□□□□□ -0.943e-11■□□□□ 11.2
DNMT1-222ENST00000590619 PUS7Q96PZ0 661 aaKnown RBP9.16□□□□□ -0.94
DNMT1-222ENST00000590619 GGNBP2Q9H3C7 697 aa9.16□□□□□ -0.94
DNMT1-222ENST00000590619 DDX21Q9NR30 783 aaKnown RBP eCLIP9.16□□□□□ -0.94
DNMT1-222ENST00000590619 AOC2O75106 756 aa9.15□□□□□ -0.94
DNMT1-222ENST00000590619 PTCD1O75127 700 aaKnown RBP9.15□□□□□ -0.94
DNMT1-222ENST00000590619 EPHX2P34913 555 aa9.15□□□□□ -0.94
DNMT1-222ENST00000590619 MAP2K2P36507 400 aa9.15□□□□□ -0.94
DNMT1-222ENST00000590619 ECE1P42892 770 aa9.15□□□□□ -0.94
DNMT1-222ENST00000590619 SOX10P56693 466 aa9.15□□□□□ -0.94
DNMT1-222ENST00000590619 GRM1Q13255 1194 aa9.15□□□□□ -0.94
DNMT1-222ENST00000590619 CST9Q5W186 159 aa9.15□□□□□ -0.94
DNMT1-222ENST00000590619 EYA1Q99502 592 aa9.15□□□□□ -0.94
DNMT1-222ENST00000590619 CCDC88AQ3V6T2 1871 aa9.15□□□□□ -0.95
DNMT1-222ENST00000590619 SMG6Q86US8 1419 aaKnown RBP9.14□□□□□ -0.95
DNMT1-222ENST00000590619 ROCK2O75116 1388 aaKnown RBP9.14□□□□□ -0.95
DNMT1-222ENST00000590619 LTBP3Q9NS15 1303 aa9.14□□□□□ -0.95
DNMT1-222ENST00000590619 PAXIP1Q6ZW49 1069 aaPredicted RBP9.14□□□□□ -0.95
DNMT1-222ENST00000590619 TAOK3Q9H2K8 898 aa9.14□□□□□ -0.95
DNMT1-222ENST00000590619 BCL2L12Q9HB09 334 aa9.14□□□□□ -0.95
DNMT1-222ENST00000590619 HACL1Q9UJ83 578 aa9.14□□□□□ -0.95
DNMT1-222ENST00000590619 MYH14Q7Z406 1995 aaKnown RBP9.13□□□□□ -0.95
DNMT1-222ENST00000590619 PNMA8AQ86V59 439 aaPredicted RBP9.13□□□□□ -0.95
DNMT1-222ENST00000590619 NARFQ9UHQ1 456 aa9.13□□□□□ -0.95
DNMT1-222ENST00000590619 TONSLQ96HA7 1378 aa9.12□□□□□ -0.95
DNMT1-222ENST00000590619 CA12O43570 354 aa9.12□□□□□ -0.95
DNMT1-222ENST00000590619 CABP4P57796 275 aa9.12□□□□□ -0.95
DNMT1-222ENST00000590619 CCDC24Q8N4L8 307 aa9.11□□□□□ -0.95
DNMT1-222ENST00000590619 NFATC2IPQ8NCF5 419 aa9.11□□□□□ -0.95
DNMT1-222ENST00000590619 BRIP1Q9BX63 1249 aa9.11□□□□□ -0.95
DNMT1-222ENST00000590619 EMILIN1Q9Y6C2 1016 aa9.11□□□□□ -0.95
DNMT1-222ENST00000590619 TLL2Q9Y6L7 1015 aa9.11□□□□□ -0.95
DNMT1-222ENST00000590619 CASP8AP2Q9UKL3 1982 aa9.11□□□□□ -0.95
DNMT1-222ENST00000590619 FLT4P35916 1363 aa9.11□□□□□ -0.95
DNMT1-222ENST00000590619 CARMIL3Q8ND23 1372 aa9.11□□□□□ -0.95
DNMT1-222ENST00000590619 ZNF541Q9H0D2 1346 aa9.1□□□□□ -0.95
DNMT1-222ENST00000590619 PDE6BP35913 854 aa9.1□□□□□ -0.95
DNMT1-222ENST00000590619 BICDL1Q6ZP65 573 aa9.1□□□□□ -0.95
DNMT1-222ENST00000590619 DNAJC10Q8IXB1 793 aa9.1□□□□□ -0.95
DNMT1-222ENST00000590619 C7orf43Q8WVR3 580 aa9.1□□□□□ -0.95
DNMT1-222ENST00000590619 PDZRN3Q9UPQ7 1066 aa9.1□□□□□ -0.95
DNMT1-222ENST00000590619 SOS1Q07889 1333 aaPredicted RBP9.09□□□□□ -0.95
DNMT1-222ENST00000590619 RNF123Q5XPI4 1314 aa9.09□□□□□ -0.95
DNMT1-222ENST00000590619 TIAM2Q8IVF5 1701 aa9.09□□□□□ -0.95
DNMT1-222ENST00000590619 NCAPD2Q15021 1401 aa9.09□□□□□ -0.95
DNMT1-222ENST00000590619 TRAF5O00463 557 aa9.09□□□□□ -0.95
DNMT1-222ENST00000590619 PPM1GO15355 546 aaPredicted RBP9.09□□□□□ -0.95
DNMT1-222ENST00000590619 HABP4Q5JVS0 413 aaKnown RBP9.09□□□□□ -0.95
DNMT1-222ENST00000590619 CNKSR1Q969H4 720 aa9.09□□□□□ -0.95
DNMT1-222ENST00000590619 KIF24Q5T7B8 1368 aa9.09□□□□□ -0.95
DNMT1-222ENST00000590619 WASHC2AQ641Q2 1341 aa9.08□□□□□ -0.96
DNMT1-222ENST00000590619 FZD9O00144 591 aa9.08□□□□□ -0.96
DNMT1-222ENST00000590619 HSP90AB1P08238 724 aaKnown RBP9.08□□□□□ -0.96
DNMT1-222ENST00000590619 CYP19A1P11511 503 aaPredicted RBP9.08□□□□□ -0.96
DNMT1-222ENST00000590619 BRPF1P55201 1214 aaPredicted RBP9.08□□□□□ -0.96
DNMT1-222ENST00000590619 CIAPIN1Q6FI81 312 aa9.08□□□□□ -0.96
DNMT1-222ENST00000590619 SAPCD2Q86UD0 394 aa9.08□□□□□ -0.96
DNMT1-222ENST00000590619 GCC1Q96CN9 775 aa9.08□□□□□ -0.96
DNMT1-222ENST00000590619 ZIC5Q96T25 663 aa9.08□□□□□ -0.96
DNMT1-222ENST00000590619 CARD11Q9BXL7 1154 aa9.08□□□□□ -0.96
DNMT1-222ENST00000590619 ZNF277Q9NRM2 450 aaPredicted RBP9.08□□□□□ -0.96
DNMT1-222ENST00000590619 ST20-MTHFSA0A0A6YYL1 179 aa9.07□□□□□ -0.96
DNMT1-222ENST00000590619 SRGNP10124 158 aa9.07□□□□□ -0.96
DNMT1-222ENST00000590619 MTHFSP49914 203 aa9.07□□□□□ -0.96
DNMT1-222ENST00000590619 TBC1D9BQ66K14 1250 aa9.07□□□□□ -0.96
DNMT1-222ENST00000590619 STYK1Q6J9G0 422 aa9.07□□□□□ -0.96
DNMT1-222ENST00000590619 PRR5LQ6MZQ0 368 aa9.07□□□□□ -0.96
DNMT1-222ENST00000590619 PRPF40BQ6NWY9 871 aaKnown RBP9.07□□□□□ -0.96
DNMT1-222ENST00000590619 SIN3AQ96ST3 1273 aa9.07□□□□□ -0.96
DNMT1-222ENST00000590619 DICER1Q9UPY3 1922 aaKnown RBP9.07□□□□□ -0.96
DNMT1-222ENST00000590619 ZNF831Q5JPB2 1677 aa9.07□□□□□ -0.96
DNMT1-222ENST00000590619 SCN4AP35499 1836 aa9.06□□□□□ -0.96
DNMT1-222ENST00000590619 EPS15P42566 896 aa9.06□□□□□ -0.96
DNMT1-222ENST00000590619 PLEKHO1Q53GL0 409 aaPredicted RBP9.06□□□□□ -0.96
DNMT1-222ENST00000590619 SOGA3Q5TF21 947 aa9.06□□□□□ -0.96
DNMT1-222ENST00000590619 GPC2Q8N158 579 aa9.06□□□□□ -0.96
DNMT1-222ENST00000590619 ZBTB1Q9Y2K1 713 aa9.06□□□□□ -0.96
DNMT1-222ENST00000590619 FER1L6Q2WGJ9 1857 aa9.06□□□□□ -0.96
DNMT1-222ENST00000590619 COL5A3P25940 1745 aaPredicted RBP9.05□□□□□ -0.96
DNMT1-222ENST00000590619 ADAMTSL1Q8N6G6 1762 aa9.05□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms