RNA–Protein interactions for RNA: ENST00000590563.1

LSM12-203, Transcript of LSM12 homolog, humanhuman

TSL 2

Gene LSM12, Length 559 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM12-203ENST00000590563 TESK2Q96S53 571 aa18.76■□□□□ 0.59
LSM12-203ENST00000590563 AFDNP55196 1824 aaKnown RBP18.76■□□□□ 0.59
LSM12-203ENST00000590563 CARMIL3Q8ND23 1372 aa18.74■□□□□ 0.59
LSM12-203ENST00000590563 DPY19L2Q6NUT2 758 aa18.74■□□□□ 0.59
LSM12-203ENST00000590563 EYA1Q99502 592 aa18.74■□□□□ 0.59
LSM12-203ENST00000590563 THSD7BQ9C0I4 1608 aa18.74■□□□□ 0.59
LSM12-203ENST00000590563 DICER1Q9UPY3 1922 aaKnown RBP18.73■□□□□ 0.59
LSM12-203ENST00000590563 CCDC85CA6NKD9 419 aa18.73■□□□□ 0.59
LSM12-203ENST00000590563 TTLL6Q8N841 843 aa18.73■□□□□ 0.59
LSM12-203ENST00000590563 ERVV-2B6SEH9 535 aa18.72■□□□□ 0.59
LSM12-203ENST00000590563 TMEM88BA6NKF7 163 aa18.71■□□□□ 0.59
LSM12-203ENST00000590563 DDNO94850 711 aaPredicted RBP18.71■□□□□ 0.59
LSM12-203ENST00000590563 ITGBL1O95965 494 aaPredicted RBP18.71■□□□□ 0.59
LSM12-203ENST00000590563 ADAMTSL1Q8N6G6 1762 aa18.7■□□□□ 0.58
LSM12-203ENST00000590563 FER1L6Q2WGJ9 1857 aa18.7■□□□□ 0.58
LSM12-203ENST00000590563 ERFEQ4G0M1 354 aa18.7■□□□□ 0.58
LSM12-203ENST00000590563 USPL1Q5W0Q7 1092 aa18.7■□□□□ 0.58
LSM12-203ENST00000590563 INTS5Q6P9B9 1019 aaKnown RBP18.7■□□□□ 0.58
LSM12-203ENST00000590563 RASSF10A6NK89 507 aa18.69■□□□□ 0.58
LSM12-203ENST00000590563 NFIXQ14938 502 aa18.69■□□□□ 0.58
LSM12-203ENST00000590563 LDHDQ86WU2 507 aa18.69■□□□□ 0.58
LSM12-203ENST00000590563 C2CD5Q86YS7 1000 aa18.68■□□□□ 0.58
LSM12-203ENST00000590563 COL11A2P13942 1736 aaPredicted RBP18.68■□□□□ 0.58
LSM12-203ENST00000590563 WASHC2AQ641Q2 1341 aa18.68■□□□□ 0.58
LSM12-203ENST00000590563 PTCD1O75127 700 aaKnown RBP18.67■□□□□ 0.58
LSM12-203ENST00000590563 NEUROD1Q13562 356 aa18.66■□□□□ 0.58
LSM12-203ENST00000590563 TAF1DQ9H5J8 278 aaPredicted RBP18.66■□□□□ 0.58
LSM12-203ENST00000590563 BCL2L12Q9HB09 334 aa18.66■□□□□ 0.58
LSM12-203ENST00000590563 SOS1Q07889 1333 aaPredicted RBP18.66■□□□□ 0.58
LSM12-203ENST00000590563 LTBP3Q9NS15 1303 aa18.66■□□□□ 0.58
LSM12-203ENST00000590563 ANKRD31Q8N7Z5 1873 aa18.65■□□□□ 0.58
LSM12-203ENST00000590563 SERPINB2P05120 415 aa18.65■□□□□ 0.58
LSM12-203ENST00000590563 L3MBTL3Q96JM7 780 aaPredicted RBP18.65■□□□□ 0.58
LSM12-203ENST00000590563 WDR33Q9C0J8 1336 aaKnown RBP18.65■□□□□ 0.58
LSM12-203ENST00000590563 LTBP1Q14766 1721 aa18.64■□□□□ 0.57
LSM12-203ENST00000590563 MAP2K1Q02750 393 aaPredicted RBP18.64■□□□□ 0.57
LSM12-203ENST00000590563 SCN4AP35499 1836 aa18.64■□□□□ 0.57
LSM12-203ENST00000590563 ST20-MTHFSA0A0A6YYL1 179 aa18.63■□□□□ 0.57
LSM12-203ENST00000590563 PPM1GO15355 546 aaPredicted RBP18.63■□□□□ 0.57
LSM12-203ENST00000590563 C21orf2O43822 256 aa18.63■□□□□ 0.57
LSM12-203ENST00000590563 ZPR1O75312 459 aa18.63■□□□□ 0.57
LSM12-203ENST00000590563 DEFB115Q30KQ5 88 aa18.63■□□□□ 0.57
LSM12-203ENST00000590563 IQCA1LA6NCM1 817 aa18.62■□□□□ 0.57
LSM12-203ENST00000590563 H0YIN7 160 aa18.62■□□□□ 0.57
LSM12-203ENST00000590563 HSP90AB1P08238 724 aaKnown RBP18.62■□□□□ 0.57
LSM12-203ENST00000590563 CABP4P57796 275 aa18.62■□□□□ 0.57
LSM12-203ENST00000590563 TNRC18O15417 2968 aaPredicted RBP18.62■□□□□ 0.57
LSM12-203ENST00000590563 COL15A1P39059 1388 aa18.61■□□□□ 0.57
LSM12-203ENST00000590563 ZNF219Q9P2Y4 722 aaPredicted RBP18.61■□□□□ 0.57
LSM12-203ENST00000590563 NARFQ9UHQ1 456 aa18.61■□□□□ 0.57
LSM12-203ENST00000590563 EIF4A2Q14240 407 aaKnown RBP18.6■□□□□ 0.57
LSM12-203ENST00000590563 TAOK3Q9H2K8 898 aa18.6■□□□□ 0.57
LSM12-203ENST00000590563 DNAJC10Q8IXB1 793 aa18.59■□□□□ 0.57
LSM12-203ENST00000590563 CARD14Q9BXL6 1004 aa18.59■□□□□ 0.57
LSM12-203ENST00000590563 EAPPQ56P03 285 aaPredicted RBP18.58■□□□□ 0.56
LSM12-203ENST00000590563 MCOLN1Q9GZU1 580 aa18.58■□□□□ 0.56
LSM12-203ENST00000590563 ZNF530Q6P9A1 599 aaPredicted RBP18.57■□□□□ 0.56
LSM12-203ENST00000590563 NFATC2IPQ8NCF5 419 aa18.57■□□□□ 0.56
LSM12-203ENST00000590563 ZNF622Q969S3 477 aaKnown RBP eCLIP18.57■□□□□ 0.56
LSM12-203ENST00000590563 POLKQ9UBT6 870 aa18.57■□□□□ 0.56
LSM12-203ENST00000590563 ZNF541Q9H0D2 1346 aa18.56■□□□□ 0.56
LSM12-203ENST00000590563 CYP19A1P11511 503 aaPredicted RBP18.56■□□□□ 0.56
LSM12-203ENST00000590563 MAP1SQ66K74 1059 aaPredicted RBP18.56■□□□□ 0.56
LSM12-203ENST00000590563 TSKSQ9UJT2 592 aa18.56■□□□□ 0.56
LSM12-203ENST00000590563 ARFGEF2Q9Y6D5 1785 aa18.55■□□□□ 0.56
LSM12-203ENST00000590563 CFAP44Q96MT7 982 aa18.55■□□□□ 0.56
LSM12-203ENST00000590563 ABT1Q9ULW3 272 aaKnown RBP18.55■□□□□ 0.56
LSM12-203ENST00000590563 ZBTB1Q9Y2K1 713 aa18.55■□□□□ 0.56
LSM12-203ENST00000590563 SLX4Q8IY92 1834 aa18.55■□□□□ 0.56
LSM12-203ENST00000590563 CNTROBQ8N137 903 aa18.54■□□□□ 0.56
LSM12-203ENST00000590563 EPHX2P34913 555 aa18.53■□□□□ 0.56
LSM12-203ENST00000590563 PLEKHO1Q53GL0 409 aaPredicted RBP18.53■□□□□ 0.56
LSM12-203ENST00000590563 CAPNS2Q96L46 248 aa18.53■□□□□ 0.56
LSM12-203ENST00000590563 HACL1Q9UJ83 578 aa18.53■□□□□ 0.56
LSM12-203ENST00000590563 SCN7AQ01118 1682 aa18.53■□□□□ 0.56
LSM12-203ENST00000590563 MTHFSP49914 203 aa18.52■□□□□ 0.56
LSM12-203ENST00000590563 PRR5LQ6MZQ0 368 aa18.52■□□□□ 0.56
LSM12-203ENST00000590563 CCDC24Q8N4L8 307 aa18.52■□□□□ 0.56
LSM12-203ENST00000590563 BRIP1Q9BX63 1249 aa18.52■□□□□ 0.56
LSM12-203ENST00000590563 CLEC11AQ9Y240 323 aa18.52■□□□□ 0.56
LSM12-203ENST00000590563 SCN11AQ9UI33 1791 aa18.51■□□□□ 0.55
LSM12-203ENST00000590563 FMR1Q06787 632 aaKnown RBP eCLIP18.51■□□□□ 0.55
LSM12-203ENST00000590563 CYP4F22Q6NT55 531 aa18.51■□□□□ 0.55
LSM12-203ENST00000590563 PRPF40BQ6NWY9 871 aaKnown RBP18.51■□□□□ 0.55
LSM12-203ENST00000590563 BICDL1Q6ZP65 573 aa18.51■□□□□ 0.55
LSM12-203ENST00000590563 DDX21Q9NR30 783 aaKnown RBP eCLIP18.51■□□□□ 0.55
LSM12-203ENST00000590563 PDZRN3Q9UPQ7 1066 aa18.51■□□□□ 0.55
LSM12-203ENST00000590563 CACNA1SQ13698 1873 aa18.51■□□□□ 0.55
LSM12-203ENST00000590563 MRC1P22897 1456 aa18.51■□□□□ 0.55
LSM12-203ENST00000590563 RNF123Q5XPI4 1314 aa18.5■□□□□ 0.55
LSM12-203ENST00000590563 SLC24A1O60721 1099 aa18.5■□□□□ 0.55
LSM12-203ENST00000590563 PDE6BP35913 854 aa18.5■□□□□ 0.55
LSM12-203ENST00000590563 TBC1D9BQ66K14 1250 aa18.5■□□□□ 0.55
LSM12-203ENST00000590563 GPR101Q96P66 508 aaPredicted RBP18.5■□□□□ 0.55
LSM12-203ENST00000590563 AMOTQ4VCS5 1084 aa18.49■□□□□ 0.55
LSM12-203ENST00000590563 BEGAINQ9BUH8 593 aa18.49■□□□□ 0.55
LSM12-203ENST00000590563 PNMA8AQ86V59 439 aaPredicted RBP18.48■□□□□ 0.55
LSM12-203ENST00000590563 C7orf43Q8WVR3 580 aa18.48■□□□□ 0.55
LSM12-203ENST00000590563 AOC2O75106 756 aa18.47■□□□□ 0.55
LSM12-203ENST00000590563 ECE1P42892 770 aa18.47■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms