RNA–Protein interactions for RNA: ENST00000590550.6

MBD3-207, Transcript of methyl-CpG binding domain protein 3, humanhuman

TSL 2 BASIC

Gene MBD3, Length 2,782 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3-207ENST00000590550 DYNC1I1O14576 645 aa23.31■■□□□ 1.32
MBD3-207ENST00000590550 KCNQ3O43525 872 aa23.31■■□□□ 1.32
MBD3-207ENST00000590550 HTATSF1O43719 755 aaKnown RBP23.31■■□□□ 1.32
MBD3-207ENST00000590550 NWD1Q149M9 1564 aa23.3■■□□□ 1.32
MBD3-207ENST00000590550 ZNF500O60304 480 aaPredicted RBP23.3■■□□□ 1.32
MBD3-207ENST00000590550 PDE4CQ08493 712 aa23.3■■□□□ 1.32
MBD3-207ENST00000590550 FOXD4L6Q3SYB3 417 aaPredicted RBP23.3■■□□□ 1.32
MBD3-207ENST00000590550 FOXD4L3Q6VB84 417 aaPredicted RBP23.3■■□□□ 1.32
MBD3-207ENST00000590550 MTERF4Q7Z6M4 381 aaKnown RBP23.3■■□□□ 1.32
MBD3-207ENST00000590550 THEMISQ8N1K5 641 aaPredicted RBP23.3■■□□□ 1.32
MBD3-207ENST00000590550 JARID2Q92833 1246 aaPredicted RBP23.29■■□□□ 1.32
MBD3-207ENST00000590550 CWC22Q9HCG8 908 aaKnown RBP23.29■■□□□ 1.32
MBD3-207ENST00000590550 SURF6O75683 361 aaKnown RBP23.29■■□□□ 1.32
MBD3-207ENST00000590550 DMTNQ08495 405 aa23.29■■□□□ 1.32
MBD3-207ENST00000590550 PPP1R42Q7Z4L9 355 aa23.29■■□□□ 1.32
MBD3-207ENST00000590550 FAM208AQ9UK61 1670 aaKnown RBP23.29■■□□□ 1.32
MBD3-207ENST00000590550 NBPF7P0C2Y1 421 aaPredicted RBP23.29■■□□□ 1.32
MBD3-207ENST00000590550 ZSCAN23Q3MJ62 389 aa23.29■■□□□ 1.32
MBD3-207ENST00000590550 GPT2Q8TD30 523 aa23.29■■□□□ 1.32
MBD3-207ENST00000590550 NSFL1CQ9UNZ2 370 aaKnown RBP23.29■■□□□ 1.32
MBD3-207ENST00000590550 NBPF6Q5VWK0 638 aa23.28■■□□□ 1.32
MBD3-207ENST00000590550 NBPF4Q96M43 638 aa23.28■■□□□ 1.32
MBD3-207ENST00000590550 RBSNQ9H1K0 784 aa23.28■■□□□ 1.32
MBD3-207ENST00000590550 XRN1Q8IZH2 1706 aaKnown RBP23.27■■□□□ 1.32
MBD3-207ENST00000590550 BBXQ8WY36 941 aaPredicted RBP23.27■■□□□ 1.32
MBD3-207ENST00000590550 CHPF2Q9P2E5 772 aa23.27■■□□□ 1.32
MBD3-207ENST00000590550 ARHGAP23Q9P227 1491 aa23.27■■□□□ 1.32
MBD3-207ENST00000590550 LRRC59Q96AG4 307 aaKnown RBP23.27■■□□□ 1.32
MBD3-207ENST00000590550 SLIT1O75093 1534 aa23.26■■□□□ 1.31
MBD3-207ENST00000590550 CCDC94Q9BW85 323 aaPredicted RBP23.26■■□□□ 1.31
MBD3-207ENST00000590550 ZSCAN20P17040 1043 aaPredicted RBP23.25■■□□□ 1.31
MBD3-207ENST00000590550 TSC1Q92574 1164 aa23.25■■□□□ 1.31
MBD3-207ENST00000590550 SRGAP3O43295 1099 aa23.25■■□□□ 1.31
MBD3-207ENST00000590550 LRRC37A3O60309 1634 aa23.25■■□□□ 1.31
MBD3-207ENST00000590550 SOS1Q07889 1333 aaPredicted RBP23.25■■□□□ 1.31
MBD3-207ENST00000590550 SASS6Q6UVJ0 657 aa23.24■■□□□ 1.31
MBD3-207ENST00000590550 SRCIN1Q9C0H9 1055 aa23.24■■□□□ 1.31
MBD3-207ENST00000590550 ZKSCAN5Q9Y2L8 839 aa23.24■■□□□ 1.31
MBD3-207ENST00000590550 PI4KAP2A4QPH2 592 aa23.24■■□□□ 1.31
MBD3-207ENST00000590550 PI4KAP1Q8N8J0 262 aa23.24■■□□□ 1.31
MBD3-207ENST00000590550 LARP6Q9BRS8 491 aaKnown RBP23.23■■□□□ 1.31
MBD3-207ENST00000590550 STAP2Q9UGK3 403 aa23.23■■□□□ 1.31
MBD3-207ENST00000590550 MCCP23508 829 aa23.23■■□□□ 1.31
MBD3-207ENST00000590550 PRIM1P49642 420 aaKnown RBP23.23■■□□□ 1.31
MBD3-207ENST00000590550 CBX1P83916 185 aa23.23■■□□□ 1.31
MBD3-207ENST00000590550 HS1BP3Q53T59 392 aa23.23■■□□□ 1.31
MBD3-207ENST00000590550 MPRIPQ6WCQ1 1025 aa23.23■■□□□ 1.31
MBD3-207ENST00000590550 SSH3Q8TE77 659 aa23.23■■□□□ 1.31
MBD3-207ENST00000590550 PHF8Q9UPP1 1060 aa23.23■■□□□ 1.31
MBD3-207ENST00000590550 CSPP1Q1MSJ5 1256 aa23.23■■□□□ 1.31
MBD3-207ENST00000590550 MARF1Q9Y4F3 1742 aaKnown RBP23.22■■□□□ 1.31
MBD3-207ENST00000590550 DTNBO60941 627 aa23.22■■□□□ 1.31
MBD3-207ENST00000590550 EIF4A1P60842 406 aaKnown RBP23.22■■□□□ 1.31
MBD3-207ENST00000590550 RHPN1Q8TCX5 695 aa23.22■■□□□ 1.31
MBD3-207ENST00000590550 UTP14CQ5TAP6 766 aaKnown RBP23.21■■□□□ 1.31
MBD3-207ENST00000590550 TMEM63CQ9P1W3 806 aa23.21■■□□□ 1.31
MBD3-207ENST00000590550 ZNF445P59923 1031 aa23.2■■□□□ 1.3
MBD3-207ENST00000590550 TPRNQ4KMQ1 711 aa23.2■■□□□ 1.3
MBD3-207ENST00000590550 ESCO1Q5FWF5 840 aa23.19■■□□□ 1.3
MBD3-207ENST00000590550 GDPD2Q9HCC8 539 aa23.19■■□□□ 1.3
MBD3-207ENST00000590550 SYCE3A1L190 88 aa23.19■■□□□ 1.3
MBD3-207ENST00000590550 PDLIM2Q96JY6 352 aa23.19■■□□□ 1.3
MBD3-207ENST00000590550 TUBGCP6Q96RT7 1819 aa23.19■■□□□ 1.3
MBD3-207ENST00000590550 DNTTIP2Q5QJE6 756 aaKnown RBP23.18■■□□□ 1.3
MBD3-207ENST00000590550 PI4K2BQ8TCG2 481 aa23.18■■□□□ 1.3
MBD3-207ENST00000590550 IP6K1Q92551 441 aa23.18■■□□□ 1.3
MBD3-207ENST00000590550 ANKARQ7Z5J8 1434 aa23.18■■□□□ 1.3
MBD3-207ENST00000590550 BEND3Q5T5X7 828 aa23.18■■□□□ 1.3
MBD3-207ENST00000590550 ZNF530Q6P9A1 599 aaPredicted RBP23.18■■□□□ 1.3
MBD3-207ENST00000590550 DNAAF4Q8WXU2 420 aa23.18■■□□□ 1.3
MBD3-207ENST00000590550 PRAMEF22A3QJZ6 481 aa23.17■■□□□ 1.3
MBD3-207ENST00000590550 PSME1Q06323 249 aa23.17■■□□□ 1.3
MBD3-207ENST00000590550 TEFQ10587 303 aa23.17■■□□□ 1.3
MBD3-207ENST00000590550 LMOD2Q6P5Q4 547 aa23.17■■□□□ 1.3
MBD3-207ENST00000590550 BTBD11A6QL63 1104 aa23.17■■□□□ 1.3
MBD3-207ENST00000590550 POLA2Q14181 598 aa23.17■■□□□ 1.3
MBD3-207ENST00000590550 PPP4R3BQ5MIZ7 849 aa23.17■■□□□ 1.3
MBD3-207ENST00000590550 CEMIPQ8WUJ3 1361 aa23.16■■□□□ 1.3
MBD3-207ENST00000590550 FAM177BA6PVY3 158 aa23.16■■□□□ 1.3
MBD3-207ENST00000590550 CUL4AQ13619 759 aa23.16■■□□□ 1.3
MBD3-207ENST00000590550 SPG7Q9UQ90 795 aa23.16■■□□□ 1.3
MBD3-207ENST00000590550 BRD1O95696 1058 aa23.16■■□□□ 1.3
MBD3-207ENST00000590550 OS9Q13438 667 aaPredicted RBP23.16■■□□□ 1.3
MBD3-207ENST00000590550 PROSER3Q2NL68 480 aa23.16■■□□□ 1.3
MBD3-207ENST00000590550 CWC27Q6UX04 472 aaKnown RBP23.16■■□□□ 1.3
MBD3-207ENST00000590550 CPA1P15085 419 aa23.15■■□□□ 1.3
MBD3-207ENST00000590550 GTF2E1P29083 439 aaPredicted RBP23.15■■□□□ 1.3
MBD3-207ENST00000590550 MPNDQ8N594 471 aa23.15■■□□□ 1.3
MBD3-207ENST00000590550 ANAPC15P60006 121 aa23.14■■□□□ 1.3
MBD3-207ENST00000590550 RNF214Q8ND24 703 aa23.14■■□□□ 1.3
MBD3-207ENST00000590550 BABAM1Q9NWV8 329 aa23.14■■□□□ 1.3
MBD3-207ENST00000590550 MCM2P49736 904 aa23.14■■□□□ 1.29
MBD3-207ENST00000590550 HSPA4P34932 840 aa23.13■■□□□ 1.29
MBD3-207ENST00000590550 RASEFQ8IZ41 740 aa23.13■■□□□ 1.29
MBD3-207ENST00000590550 PA2G4Q9UQ80 394 aaKnown RBP23.13■■□□□ 1.29
MBD3-207ENST00000590550 PXDNLA1KZ92 1463 aa23.13■■□□□ 1.29
MBD3-207ENST00000590550 PTMAP06454 111 aaKnown RBP23.13■■□□□ 1.29
MBD3-207ENST00000590550 KIF1BPQ96EK5 621 aa23.13■■□□□ 1.29
MBD3-207ENST00000590550 LTN1O94822 1766 aa23.13■■□□□ 1.29
MBD3-207ENST00000590550 ADCY9O60503 1353 aa23.13■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms