RNA–Protein interactions for RNA: ENST00000589937.5

RFX1-207, Transcript of regulatory factor X1, humanhuman

TSL 4

Gene RFX1, Length 540 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX1-207ENST00000589937 COL11A2P13942 1736 aaPredicted RBP17.01■□□□□ 0.31
RFX1-207ENST00000589937 KCNQ3O43525 872 aa17■□□□□ 0.31
RFX1-207ENST00000589937 U2AF1L5P0DN76 240 aaPredicted RBP17■□□□□ 0.31
RFX1-207ENST00000589937 U2AF1Q01081 240 aaKnown RBP eCLIP17■□□□□ 0.31
RFX1-207ENST00000589937 USPL1Q5W0Q7 1092 aa17■□□□□ 0.31
RFX1-207ENST00000589937 ZNF496Q96IT1 587 aaPredicted RBP17■□□□□ 0.31
RFX1-207ENST00000589937 PARP3Q9Y6F1 533 aa17■□□□□ 0.31
RFX1-207ENST00000589937 LAMB4A4D0S4 1761 aa17■□□□□ 0.31
RFX1-207ENST00000589937 KDM3BQ7LBC6 1761 aa17■□□□□ 0.31
RFX1-207ENST00000589937 CACNA1SQ13698 1873 aa16.99■□□□□ 0.31
RFX1-207ENST00000589937 DPEP1P16444 411 aa16.99■□□□□ 0.31
RFX1-207ENST00000589937 TEFQ10587 303 aa16.99■□□□□ 0.31
RFX1-207ENST00000589937 HEG1Q9ULI3 1381 aa16.99■□□□□ 0.31
RFX1-207ENST00000589937 CANXP27824 592 aaKnown RBP16.98■□□□□ 0.31
RFX1-207ENST00000589937 BCL2L12Q9HB09 334 aa16.98■□□□□ 0.31
RFX1-207ENST00000589937 POLRMTO00411 1230 aaKnown RBP16.97■□□□□ 0.31
RFX1-207ENST00000589937 DCTN1Q14203 1278 aa16.97■□□□□ 0.31
RFX1-207ENST00000589937 ZNF790Q6PG37 636 aa16.97■□□□□ 0.31
RFX1-207ENST00000589937 MCM10Q7L590 875 aa16.97■□□□□ 0.31
RFX1-207ENST00000589937 TTC5Q8N0Z6 440 aa16.97■□□□□ 0.31
RFX1-207ENST00000589937 ZNF526Q8TF50 670 aaPredicted RBP16.97■□□□□ 0.31
RFX1-207ENST00000589937 CARMIL3Q8ND23 1372 aa16.97■□□□□ 0.31
RFX1-207ENST00000589937 SBF1O95248 1867 aa16.97■□□□□ 0.31
RFX1-207ENST00000589937 VSIG10Q8N0Z9 540 aa16.96■□□□□ 0.31
RFX1-207ENST00000589937 BCS1LQ9Y276 419 aa16.96■□□□□ 0.31
RFX1-207ENST00000589937 PRAMEF22A3QJZ6 481 aa16.95■□□□□ 0.3
RFX1-207ENST00000589937 ZPR1O75312 459 aa16.95■□□□□ 0.3
RFX1-207ENST00000589937 KCNA3P22001 575 aa16.95■□□□□ 0.3
RFX1-207ENST00000589937 CHRNA5P30532 468 aa16.95■□□□□ 0.3
RFX1-207ENST00000589937 GIGYF1O75420 1035 aaPredicted RBP16.94■□□□□ 0.3
RFX1-207ENST00000589937 TM4SF1P30408 202 aa16.94■□□□□ 0.3
RFX1-207ENST00000589937 PIP4K2AP48426 406 aaPredicted RBP16.94■□□□□ 0.3
RFX1-207ENST00000589937 TGFB2P61812 414 aa16.94■□□□□ 0.3
RFX1-207ENST00000589937 NFIXQ14938 502 aa16.94■□□□□ 0.3
RFX1-207ENST00000589937 NARFQ9UHQ1 456 aa16.94■□□□□ 0.3
RFX1-207ENST00000589937 NUDCQ9Y266 331 aa16.94■□□□□ 0.3
RFX1-207ENST00000589937 ZNF330Q9Y3S2 320 aaPredicted RBP16.94■□□□□ 0.3
RFX1-207ENST00000589937 CCDC88AQ3V6T2 1871 aa16.94■□□□□ 0.3
RFX1-207ENST00000589937 C1QTNF8P60827 252 aa16.93■□□□□ 0.3
RFX1-207ENST00000589937 BTBD11A6QL63 1104 aa16.92■□□□□ 0.3
RFX1-207ENST00000589937 A1BGP04217 495 aa16.92■□□□□ 0.3
RFX1-207ENST00000589937 EIF5P55010 431 aaKnown RBP16.92■□□□□ 0.3
RFX1-207ENST00000589937 TIAM2Q8IVF5 1701 aa16.91■□□□□ 0.3
RFX1-207ENST00000589937 FCHSD2O94868 740 aa16.91■□□□□ 0.3
RFX1-207ENST00000589937 FMNL2Q96PY5 1086 aa16.91■□□□□ 0.3
RFX1-207ENST00000589937 STARD3NLO95772 234 aa16.9■□□□□ 0.3
RFX1-207ENST00000589937 BICDL1Q6ZP65 573 aa16.9■□□□□ 0.3
RFX1-207ENST00000589937 TBC1D2BQ9UPU7 963 aa16.9■□□□□ 0.3
RFX1-207ENST00000589937 CEP350Q5VT06 3117 aa16.9■□□□□ 0.3
RFX1-207ENST00000589937 SENP3-EIF4A1A0A087X0R7 540 aa16.89■□□□□ 0.29
RFX1-207ENST00000589937 TBC1D9BQ66K14 1250 aa16.89■□□□□ 0.29
RFX1-207ENST00000589937 THUMPD2Q9BTF0 503 aaKnown RBP16.89■□□□□ 0.29
RFX1-207ENST00000589937 ARFGEF2Q9Y6D5 1785 aa16.88■□□□□ 0.29
RFX1-207ENST00000589937 ARHGAP27Q6ZUM4 889 aa16.88■□□□□ 0.29
RFX1-207ENST00000589937 CCDC24Q8N4L8 307 aa16.88■□□□□ 0.29
RFX1-207ENST00000589937 RTF1Q92541 710 aaKnown RBP16.88■□□□□ 0.29
RFX1-207ENST00000589937 MIS18AQ9NYP9 233 aa16.88■□□□□ 0.29
RFX1-207ENST00000589937 USP16Q9Y5T5 823 aa16.88■□□□□ 0.29
RFX1-207ENST00000589937 SERPINB2P05120 415 aa16.87■□□□□ 0.29
RFX1-207ENST00000589937 PLEKHF1Q96S99 279 aa16.87■□□□□ 0.29
RFX1-207ENST00000589937 GPBP1L1Q9HC44 474 aaPredicted RBP16.87■□□□□ 0.29
RFX1-207ENST00000589937 PIM2Q9P1W9 311 aa16.86■□□□□ 0.29
RFX1-207ENST00000589937 NUP98P52948 1817 aa16.86■□□□□ 0.29
RFX1-207ENST00000589937 TNRC6CQ9HCJ0 1690 aaKnown RBP16.85■□□□□ 0.29
RFX1-207ENST00000589937 SLX4Q8IY92 1834 aa16.85■□□□□ 0.29
RFX1-207ENST00000589937 CAMTA2O94983 1202 aa16.85■□□□□ 0.29
RFX1-207ENST00000589937 IL6STP40189 918 aaPredicted RBP16.85■□□□□ 0.29
RFX1-207ENST00000589937 DDX10Q13206 875 aaKnown RBP16.85■□□□□ 0.29
RFX1-207ENST00000589937 DALRD3Q5D0E6 543 aaKnown RBP16.85■□□□□ 0.29
RFX1-207ENST00000589937 FER1L6Q2WGJ9 1857 aa16.84■□□□□ 0.29
RFX1-207ENST00000589937 RASSF7Q02833 373 aa16.84■□□□□ 0.29
RFX1-207ENST00000589937 TEX13AQ9BXU3 409 aaPredicted RBP16.84■□□□□ 0.29
RFX1-207ENST00000589937 A0A087WZG4 1122 aa16.83■□□□□ 0.28
RFX1-207ENST00000589937 NBPF26B4DH59 902 aa16.83■□□□□ 0.28
RFX1-207ENST00000589937 NFE2L2Q16236 605 aa16.83■□□□□ 0.28
RFX1-207ENST00000589937 NBPF10Q6P3W6 841 aaKnown RBP16.83■□□□□ 0.28
RFX1-207ENST00000589937 NBPF15Q8N660 670 aa16.83■□□□□ 0.28
RFX1-207ENST00000589937 C9orf131Q5VYM1 1079 aa16.82■□□□□ 0.28
RFX1-207ENST00000589937 PRR5LQ6MZQ0 368 aa16.82■□□□□ 0.28
RFX1-207ENST00000589937 DZIP3Q86Y13 1208 aaKnown RBP16.82■□□□□ 0.28
RFX1-207ENST00000589937 C2CD5Q86YS7 1000 aa16.82■□□□□ 0.28
RFX1-207ENST00000589937 DICER1Q9UPY3 1922 aaKnown RBP16.82■□□□□ 0.28
RFX1-207ENST00000589937 KIF3CO14782 793 aa16.81■□□□□ 0.28
RFX1-207ENST00000589937 HTATSF1O43719 755 aaKnown RBP16.81■□□□□ 0.28
RFX1-207ENST00000589937 SNRPA1P09661 255 aaKnown RBP16.81■□□□□ 0.28
RFX1-207ENST00000589937 PRELPP51888 382 aa16.81■□□□□ 0.28
RFX1-207ENST00000589937 TAF7Q15545 349 aaPredicted RBP16.8■□□□□ 0.28
RFX1-207ENST00000589937 NMRK2Q9NPI5 230 aa16.8■□□□□ 0.28
RFX1-207ENST00000589937 MAPK8IP3Q9UPT6 1336 aa16.79■□□□□ 0.28
RFX1-207ENST00000589937 RNF181Q9P0P0 153 aa16.79■□□□□ 0.28
RFX1-207ENST00000589937 ZNF219Q9P2Y4 722 aaPredicted RBP16.78■□□□□ 0.28
RFX1-207ENST00000589937 MYBBP1AQ9BQG0 1328 aaKnown RBP16.77■□□□□ 0.28
RFX1-207ENST00000589937 RALBP1Q15311 655 aa16.77■□□□□ 0.28
RFX1-207ENST00000589937 CCDC146Q8IYE0 955 aa16.77■□□□□ 0.28
RFX1-207ENST00000589937 CNBD1Q8NA66 436 aa16.77■□□□□ 0.28
RFX1-207ENST00000589937 RRP7AQ9Y3A4 280 aaKnown RBP16.77■□□□□ 0.28
RFX1-207ENST00000589937 ANKRD36CQ5JPF3 1778 aa16.77■□□□□ 0.27
RFX1-207ENST00000589937 NFKBIEO00221 500 aa16.76■□□□□ 0.27
RFX1-207ENST00000589937 NEFMP07197 916 aa16.76■□□□□ 0.27
RFX1-207ENST00000589937 EIF4A1P60842 406 aaKnown RBP16.76■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms