RNA–Protein interactions for RNA: ENST00000589916.5

BCAS3-223, Transcript of BCAS3, microtubule associated cell migration factor, human

TSL 2

Gene BCAS3, Length 546 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
BCAS3-223	ENST00000589916	NBPF6	Q5VWK0	638 aa		7.6	□□□□□ -1.19
BCAS3-223	ENST00000589916	NBPF4	Q96M43	638 aa		7.6	□□□□□ -1.19
BCAS3-223	ENST00000589916	TAF1D	Q9H5J8	278 aa	Predicted RBP	7.6	□□□□□ -1.19
BCAS3-223	ENST00000589916	TSKS	Q9UJT2	592 aa		7.6	□□□□□ -1.19
BCAS3-223	ENST00000589916	KDR	P35968	1356 aa		7.59	□□□□□ -1.19
BCAS3-223	ENST00000589916	LTN1	O94822	1766 aa		7.59	□□□□□ -1.19
BCAS3-223	ENST00000589916	ATP6V1A	P38606	617 aa		7.59	□□□□□ -1.19
BCAS3-223	ENST00000589916	BCLAF1	Q9NYF8	920 aa	Known RBP eCLIP	7.59	□□□□□ -1.19	2e-6	■■■■□ 21.8
BCAS3-223	ENST00000589916	RTL1	A6NKG5	1358 aa		7.59	□□□□□ -1.2
BCAS3-223	ENST00000589916	POLRMT	O00411	1230 aa	Known RBP	7.58	□□□□□ -1.2
BCAS3-223	ENST00000589916	CHRNA5	P30532	468 aa		7.58	□□□□□ -1.2
BCAS3-223	ENST00000589916	RFC4	P35249	363 aa		7.58	□□□□□ -1.2
BCAS3-223	ENST00000589916	DDR1	Q08345	913 aa		7.58	□□□□□ -1.2
BCAS3-223	ENST00000589916	NME9	Q86XW9	330 aa		7.58	□□□□□ -1.2
BCAS3-223	ENST00000589916	TTLL6	Q8N841	843 aa		7.58	□□□□□ -1.2
BCAS3-223	ENST00000589916	RAPGEF4	Q8WZA2	1011 aa		7.58	□□□□□ -1.2
BCAS3-223	ENST00000589916	HHIPL1	Q96JK4	782 aa		7.58	□□□□□ -1.2
BCAS3-223	ENST00000589916	PUS7	Q96PZ0	661 aa	Known RBP	7.58	□□□□□ -1.2
BCAS3-223	ENST00000589916	PDZRN3	Q9UPQ7	1066 aa		7.58	□□□□□ -1.2
BCAS3-223	ENST00000589916	ADAMTSL1	Q8N6G6	1762 aa		7.57	□□□□□ -1.2
BCAS3-223	ENST00000589916	ST20-MTHFS	A0A0A6YYL1	179 aa		7.57	□□□□□ -1.2
BCAS3-223	ENST00000589916	TAT	P17735	454 aa	Predicted RBP	7.57	□□□□□ -1.2
BCAS3-223	ENST00000589916	BRPF1	P55201	1214 aa	Predicted RBP	7.57	□□□□□ -1.2
BCAS3-223	ENST00000589916	ERFE	Q4G0M1	354 aa		7.57	□□□□□ -1.2
BCAS3-223	ENST00000589916	PNMA8A	Q86V59	439 aa	Predicted RBP	7.57	□□□□□ -1.2
BCAS3-223	ENST00000589916	GPR101	Q96P66	508 aa	Predicted RBP	7.57	□□□□□ -1.2
BCAS3-223	ENST00000589916	SLC4A9	Q96Q91	983 aa		7.57	□□□□□ -1.2
BCAS3-223	ENST00000589916	ATG3	Q9NT62	314 aa		7.57	□□□□□ -1.2
BCAS3-223	ENST00000589916	ASAP1	Q9ULH1	1129 aa		7.57	□□□□□ -1.2
BCAS3-223	ENST00000589916	NCAPD2	Q15021	1401 aa		7.57	□□□□□ -1.2
BCAS3-223	ENST00000589916	EDC4	Q6P2E9	1401 aa	Known RBP	7.57	□□□□□ -1.2
BCAS3-223	ENST00000589916	MON2	Q7Z3U7	1717 aa		7.57	□□□□□ -1.2
BCAS3-223	ENST00000589916	SCN4A	P35499	1836 aa		7.57	□□□□□ -1.2
BCAS3-223	ENST00000589916	USP42	Q9H9J4	1324 aa	Known RBP	7.56	□□□□□ -1.2
BCAS3-223	ENST00000589916	DDN	O94850	711 aa	Predicted RBP	7.56	□□□□□ -1.2
BCAS3-223	ENST00000589916	CNTROB	Q8N137	903 aa		7.56	□□□□□ -1.2
BCAS3-223	ENST00000589916	MPND	Q8N594	471 aa		7.56	□□□□□ -1.2
BCAS3-223	ENST00000589916	CAPNS2	Q96L46	248 aa		7.56	□□□□□ -1.2
BCAS3-223	ENST00000589916	KIF24	Q5T7B8	1368 aa		7.56	□□□□□ -1.2
BCAS3-223	ENST00000589916	MNX1	P50219	401 aa	Predicted RBP	7.55	□□□□□ -1.2
BCAS3-223	ENST00000589916	FKBP8	Q14318	412 aa		7.55	□□□□□ -1.2
BCAS3-223	ENST00000589916	SUGP2	Q8IX01	1082 aa	Known RBP eCLIP	7.55	□□□□□ -1.2
BCAS3-223	ENST00000589916	DDX21	Q9NR30	783 aa	Known RBP eCLIP	7.55	□□□□□ -1.2
BCAS3-223	ENST00000589916	ABT1	Q9ULW3	272 aa	Known RBP	7.55	□□□□□ -1.2
BCAS3-223	ENST00000589916	LTBP1	Q14766	1721 aa		7.55	□□□□□ -1.2
BCAS3-223	ENST00000589916	ITGB4	P16144	1822 aa		7.55	□□□□□ -1.2
BCAS3-223	ENST00000589916	DICER1	Q9UPY3	1922 aa	Known RBP	7.54	□□□□□ -1.2
BCAS3-223	ENST00000589916	LTV1	Q96GA3	475 aa	Predicted RBP	7.54	□□□□□ -1.2
BCAS3-223	ENST00000589916	TMOD3	Q9NYL9	352 aa		7.54	□□□□□ -1.2
BCAS3-223	ENST00000589916	TLL2	Q9Y6L7	1015 aa		7.54	□□□□□ -1.2
BCAS3-223	ENST00000589916	TIAM2	Q8IVF5	1701 aa		7.54	□□□□□ -1.2
BCAS3-223	ENST00000589916	NRXN2	Q9P2S2	1712 aa		7.53	□□□□□ -1.2
BCAS3-223	ENST00000589916	ERVV-2	B6SEH9	535 aa		7.53	□□□□□ -1.2
BCAS3-223	ENST00000589916	PAXIP1	Q6ZW49	1069 aa	Predicted RBP	7.53	□□□□□ -1.2
BCAS3-223	ENST00000589916	POLR3GL	Q9BT43	218 aa		7.53	□□□□□ -1.2
BCAS3-223	ENST00000589916	CUL9	Q8IWT3	2517 aa		7.53	□□□□□ -1.2
BCAS3-223	ENST00000589916	DLEC1	Q9Y238	1755 aa		7.52	□□□□□ -1.21
BCAS3-223	ENST00000589916	AMPH	P49418	695 aa		7.52	□□□□□ -1.21
BCAS3-223	ENST00000589916	SOGA3	Q5TF21	947 aa		7.52	□□□□□ -1.21
BCAS3-223	ENST00000589916	CST9	Q5W186	159 aa		7.52	□□□□□ -1.21
BCAS3-223	ENST00000589916	TAOK3	Q9H2K8	898 aa		7.52	□□□□□ -1.21
BCAS3-223	ENST00000589916	SAGE1	Q9NXZ1	904 aa		7.52	□□□□□ -1.21
BCAS3-223	ENST00000589916	HACL1	Q9UJ83	578 aa		7.52	□□□□□ -1.21
BCAS3-223	ENST00000589916	FER1L6	Q2WGJ9	1857 aa		7.51	□□□□□ -1.21
BCAS3-223	ENST00000589916	SZT2	Q5T011	3432 aa		7.51	□□□□□ -1.21
BCAS3-223	ENST00000589916		H0YIN7	160 aa		7.51	□□□□□ -1.21
BCAS3-223	ENST00000589916	MYCN	P04198	464 aa	Predicted RBP	7.51	□□□□□ -1.21
BCAS3-223	ENST00000589916	EPHX2	P34913	555 aa		7.51	□□□□□ -1.21
BCAS3-223	ENST00000589916	GRM1	Q13255	1194 aa		7.51	□□□□□ -1.21
BCAS3-223	ENST00000589916	CYP4F22	Q6NT55	531 aa		7.51	□□□□□ -1.21
BCAS3-223	ENST00000589916	HDGFL2	Q7Z4V5	671 aa	Predicted RBP	7.51	□□□□□ -1.21
BCAS3-223	ENST00000589916	SAPCD2	Q86UD0	394 aa		7.51	□□□□□ -1.21
BCAS3-223	ENST00000589916	TESK2	Q96S53	571 aa		7.51	□□□□□ -1.21
BCAS3-223	ENST00000589916	TERF2IP	Q9NYB0	399 aa		7.51	□□□□□ -1.21
BCAS3-223	ENST00000589916	SPG7	Q9UQ90	795 aa		7.51	□□□□□ -1.21
BCAS3-223	ENST00000589916	KIF7	Q2M1P5	1343 aa		7.51	□□□□□ -1.21
BCAS3-223	ENST00000589916	COL5A3	P25940	1745 aa	Predicted RBP	7.5	□□□□□ -1.21
BCAS3-223	ENST00000589916	MKI67	P46013	3256 aa	Known RBP	7.5	□□□□□ -1.21
BCAS3-223	ENST00000589916	FZD9	O00144	591 aa		7.5	□□□□□ -1.21
BCAS3-223	ENST00000589916	PKN2	Q16513	984 aa	Known RBP	7.5	□□□□□ -1.21
BCAS3-223	ENST00000589916	IFNL2	Q8IZJ0	200 aa		7.5	□□□□□ -1.21
BCAS3-223	ENST00000589916	C7orf43	Q8WVR3	580 aa		7.5	□□□□□ -1.21
BCAS3-223	ENST00000589916	ADAMTS7	Q9UKP4	1686 aa		7.5	□□□□□ -1.21
BCAS3-223	ENST00000589916	MYH14	Q7Z406	1995 aa	Known RBP	7.5	□□□□□ -1.21
BCAS3-223	ENST00000589916	CCDC88A	Q3V6T2	1871 aa		7.49	□□□□□ -1.21
BCAS3-223	ENST00000589916		A0A1W2PP64	1363 aa		7.49	□□□□□ -1.21
BCAS3-223	ENST00000589916	PHKG2	P15735	406 aa		7.49	□□□□□ -1.21
BCAS3-223	ENST00000589916	NFIX	Q14938	502 aa		7.49	□□□□□ -1.21
BCAS3-223	ENST00000589916	MAP1S	Q66K74	1059 aa	Predicted RBP	7.49	□□□□□ -1.21
BCAS3-223	ENST00000589916	DIEXF	Q68CQ4	756 aa	Known RBP	7.49	□□□□□ -1.21
BCAS3-223	ENST00000589916	INTS5	Q6P9B9	1019 aa	Known RBP	7.49	□□□□□ -1.21
BCAS3-223	ENST00000589916	C2CD5	Q86YS7	1000 aa		7.49	□□□□□ -1.21
BCAS3-223	ENST00000589916	COG3	Q96JB2	828 aa		7.49	□□□□□ -1.21
BCAS3-223	ENST00000589916	BRIP1	Q9BX63	1249 aa		7.49	□□□□□ -1.21
BCAS3-223	ENST00000589916	SRP68	Q9UHB9	627 aa	Known RBP	7.49	□□□□□ -1.21
BCAS3-223	ENST00000589916	NARF	Q9UHQ1	456 aa		7.49	□□□□□ -1.21
BCAS3-223	ENST00000589916	WASHC2A	Q641Q2	1341 aa		7.49	□□□□□ -1.21
BCAS3-223	ENST00000589916	CASP8AP2	Q9UKL3	1982 aa		7.48	□□□□□ -1.21
BCAS3-223	ENST00000589916	AOC2	O75106	756 aa		7.48	□□□□□ -1.21
BCAS3-223	ENST00000589916	SERPINB2	P05120	415 aa		7.48	□□□□□ -1.21

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