RNA–Protein interactions for RNA: ENST00000589823.6

VMP1-210, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 580 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-210ENST00000589823 C5P01031 1676 aa17.55■□□□□ 0.4
VMP1-210ENST00000589823 RREB1Q92766 1687 aa17.55■□□□□ 0.4
VMP1-210ENST00000589823 SOCS7O14512 581 aa17.55■□□□□ 0.4
VMP1-210ENST00000589823 CRKLP46109 303 aaKnown RBP17.55■□□□□ 0.4
VMP1-210ENST00000589823 AK7Q96M32 723 aa17.55■□□□□ 0.4
VMP1-210ENST00000589823 CCDC87Q9NVE4 849 aa17.55■□□□□ 0.4
VMP1-210ENST00000589823 CNTNAP4Q9C0A0 1308 aa17.54■□□□□ 0.4
VMP1-210ENST00000589823 LAMB4A4D0S4 1761 aa17.54■□□□□ 0.4
VMP1-210ENST00000589823 VAMP4O75379 141 aa17.54■□□□□ 0.4
VMP1-210ENST00000589823 CT47B1P0C2W7 299 aaPredicted RBP17.54■□□□□ 0.4
VMP1-210ENST00000589823 RC3H1Q5TC82 1133 aaKnown RBP17.54■□□□□ 0.4
VMP1-210ENST00000589823 CCDC30Q5VVM6 783 aa17.54■□□□□ 0.4
VMP1-210ENST00000589823 NECTIN2Q92692 538 aa17.54■□□□□ 0.4
VMP1-210ENST00000589823 COL5A3P25940 1745 aaPredicted RBP17.53■□□□□ 0.4
VMP1-210ENST00000589823 A1BGP04217 495 aa17.53■□□□□ 0.4
VMP1-210ENST00000589823 NBPF14Q5TI25 921 aa17.53■□□□□ 0.4
VMP1-210ENST00000589823 STK32BQ9NY57 414 aa17.53■□□□□ 0.4
VMP1-210ENST00000589823 TAF1LQ8IZX4 1826 aa17.53■□□□□ 0.4
VMP1-210ENST00000589823 C4BP0C0L5 1744 aa17.52■□□□□ 0.4
VMP1-210ENST00000589823 NUP188Q5SRE5 1749 aa17.52■□□□□ 0.4
VMP1-210ENST00000589823 ERBB4Q15303 1308 aa17.52■□□□□ 0.4
VMP1-210ENST00000589823 INTS5Q6P9B9 1019 aaKnown RBP17.52■□□□□ 0.4
VMP1-210ENST00000589823 GNPATO15228 680 aa17.51■□□□□ 0.39
VMP1-210ENST00000589823 CANXP27824 592 aaKnown RBP17.51■□□□□ 0.39
VMP1-210ENST00000589823 NPM2Q86SE8 214 aaKnown RBP17.51■□□□□ 0.39
VMP1-210ENST00000589823 ZNF428Q96B54 188 aa17.51■□□□□ 0.39
VMP1-210ENST00000589823 STK31Q9BXU1 1019 aa17.51■□□□□ 0.39
VMP1-210ENST00000589823 ZBTB1Q9Y2K1 713 aa17.51■□□□□ 0.39
VMP1-210ENST00000589823 AKT1S1Q96B36 256 aa17.5■□□□□ 0.39
VMP1-210ENST00000589823 TFCP2L1Q9NZI6 479 aa17.5■□□□□ 0.39
VMP1-210ENST00000589823 DBF4Q9UBU7 674 aaPredicted RBP17.5■□□□□ 0.39
VMP1-210ENST00000589823 RTCBQ9Y3I0 505 aaKnown RBP17.5■□□□□ 0.39
VMP1-210ENST00000589823 RPS6KA4O75676 772 aa17.49■□□□□ 0.39
VMP1-210ENST00000589823 MYL6BP14649 208 aa17.49■□□□□ 0.39
VMP1-210ENST00000589823 PIP4K2AP48426 406 aaPredicted RBP17.49■□□□□ 0.39
VMP1-210ENST00000589823 SLC15A2Q16348 729 aa17.49■□□□□ 0.39
VMP1-210ENST00000589823 ZNF827Q17R98 1081 aa17.49■□□□□ 0.39
VMP1-210ENST00000589823 ANO8Q9HCE9 1232 aaPredicted RBP17.49■□□□□ 0.39
VMP1-210ENST00000589823 DDX21Q9NR30 783 aaKnown RBP eCLIP17.49■□□□□ 0.39
VMP1-210ENST00000589823 CHPF2Q9P2E5 772 aa17.49■□□□□ 0.39
VMP1-210ENST00000589823 ZNF330Q9Y3S2 320 aaPredicted RBP17.49■□□□□ 0.39
VMP1-210ENST00000589823 NBPF26B4DH59 902 aa17.48■□□□□ 0.39
VMP1-210ENST00000589823 IL6STP40189 918 aaPredicted RBP17.48■□□□□ 0.39
VMP1-210ENST00000589823 NBPF10Q6P3W6 841 aaKnown RBP17.48■□□□□ 0.39
VMP1-210ENST00000589823 NBPF15Q8N660 670 aa17.48■□□□□ 0.39
VMP1-210ENST00000589823 TCERG1O14776 1098 aaKnown RBP17.47■□□□□ 0.39
VMP1-210ENST00000589823 PHF14O94880 888 aa17.47■□□□□ 0.39
VMP1-210ENST00000589823 SSFA2P28290 1259 aa17.47■□□□□ 0.39
VMP1-210ENST00000589823 PDIA6Q15084 440 aa17.47■□□□□ 0.39
VMP1-210ENST00000589823 HYPKQ9NX55 129 aa17.47■□□□□ 0.39
VMP1-210ENST00000589823 A0A087WZG4 1122 aa17.46■□□□□ 0.39
VMP1-210ENST00000589823 ANXA1P04083 346 aa17.46■□□□□ 0.39
VMP1-210ENST00000589823 SLC4A2P04920 1241 aa17.46■□□□□ 0.39
VMP1-210ENST00000589823 EIF5P55010 431 aaKnown RBP17.46■□□□□ 0.39
VMP1-210ENST00000589823 ALDH1L2Q3SY69 923 aa17.46■□□□□ 0.39
VMP1-210ENST00000589823 FLAD1Q8NFF5 587 aa17.46■□□□□ 0.39
VMP1-210ENST00000589823 MYH14Q7Z406 1995 aaKnown RBP17.46■□□□□ 0.39
VMP1-210ENST00000589823 COL15A1P39059 1388 aa17.45■□□□□ 0.38
VMP1-210ENST00000589823 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.45■□□□□ 0.38
VMP1-210ENST00000589823 ADRA2BP18089 450 aa17.45■□□□□ 0.38
VMP1-210ENST00000589823 PROSER3Q2NL68 480 aa17.45■□□□□ 0.38
VMP1-210ENST00000589823 TRAPPC3LQ5T215 181 aa17.45■□□□□ 0.38
VMP1-210ENST00000589823 ARXQ96QS3 562 aa17.45■□□□□ 0.38
VMP1-210ENST00000589823 SMC4Q9NTJ3 1288 aa17.45■□□□□ 0.38
VMP1-210ENST00000589823 RARSP54136 660 aaKnown RBP17.44■□□□□ 0.38
VMP1-210ENST00000589823 SSH1Q8WYL5 1049 aa17.44■□□□□ 0.38
VMP1-210ENST00000589823 MSH5O43196 834 aa17.43■□□□□ 0.38
VMP1-210ENST00000589823 RFC4P35249 363 aa17.43■□□□□ 0.38
VMP1-210ENST00000589823 AIMP1Q12904 312 aaKnown RBP17.43■□□□□ 0.38
VMP1-210ENST00000589823 SMIM5Q71RC9 77 aa17.43■□□□□ 0.38
VMP1-210ENST00000589823 BCL2L13Q9BXK5 485 aa17.43■□□□□ 0.38
VMP1-210ENST00000589823 UBR3Q6ZT12 1888 aa17.43■□□□□ 0.38
VMP1-210ENST00000589823 KIF6Q6ZMV9 814 aa17.42■□□□□ 0.38
VMP1-210ENST00000589823 COPS6Q7L5N1 327 aa17.42■□□□□ 0.38
VMP1-210ENST00000589823 LRP10Q7Z4F1 713 aa17.42■□□□□ 0.38
VMP1-210ENST00000589823 AMIGO3Q86WK7 504 aa17.42■□□□□ 0.38
VMP1-210ENST00000589823 DZIP3Q86Y13 1208 aaKnown RBP17.42■□□□□ 0.38
VMP1-210ENST00000589823 MRPL50Q8N5N7 158 aaKnown RBP17.42■□□□□ 0.38
VMP1-210ENST00000589823 XAGE3Q8WTP9 111 aa17.42■□□□□ 0.38
VMP1-210ENST00000589823 ARHGEF1Q92888 912 aaKnown RBP17.42■□□□□ 0.38
VMP1-210ENST00000589823 PHAXQ9H814 394 aaKnown RBP17.42■□□□□ 0.38
VMP1-210ENST00000589823 PNPLA7Q6ZV29 1317 aa17.42■□□□□ 0.38
VMP1-210ENST00000589823 ZPR1O75312 459 aa17.41■□□□□ 0.38
VMP1-210ENST00000589823 DDX58O95786 925 aaKnown RBP17.41■□□□□ 0.38
VMP1-210ENST00000589823 R3HDM1Q15032 1099 aaKnown RBP17.41■□□□□ 0.38
VMP1-210ENST00000589823 RCAN3Q9UKA8 241 aa17.41■□□□□ 0.38
VMP1-210ENST00000589823 FLIIQ13045 1269 aa17.4■□□□□ 0.38
VMP1-210ENST00000589823 COL23A1Q86Y22 540 aaPredicted RBP17.4■□□□□ 0.38
VMP1-210ENST00000589823 TBC1D2BQ9UPU7 963 aa17.4■□□□□ 0.38
VMP1-210ENST00000589823 TUBGCP6Q96RT7 1819 aa17.4■□□□□ 0.38
VMP1-210ENST00000589823 QSER1Q2KHR3 1735 aa17.39■□□□□ 0.37
VMP1-210ENST00000589823 TTLL7Q6ZT98 887 aa17.39■□□□□ 0.37
VMP1-210ENST00000589823 G2E3Q7L622 706 aa17.39■□□□□ 0.37
VMP1-210ENST00000589823 NARFQ9UHQ1 456 aa17.39■□□□□ 0.37
VMP1-210ENST00000589823 KIF16BQ96L93 1317 aa17.39■□□□□ 0.37
VMP1-210ENST00000589823 BCAR3O75815 825 aa17.38■□□□□ 0.37
VMP1-210ENST00000589823 BRPF1P55201 1214 aaPredicted RBP17.38■□□□□ 0.37
VMP1-210ENST00000589823 FKBP5Q13451 457 aaPredicted RBP17.38■□□□□ 0.37
VMP1-210ENST00000589823 ZBTB3Q9H5J0 574 aa17.38■□□□□ 0.37
VMP1-210ENST00000589823 MAP3K15Q6ZN16 1313 aa17.38■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 1792 ms