RNA–Protein interactions for RNA: ENST00000589797.5

RETREG3-208, Transcript of reticulophagy regulator family member 3, humanhuman

TSL 2

Gene RETREG3, Length 4,149 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-208ENST00000589797 ZGPATQ8N5A5 531 aaKnown RBP17.46■□□□□ 0.39
RETREG3-208ENST00000589797 NDUFB9Q9Y6M9 179 aa17.46■□□□□ 0.39
RETREG3-208ENST00000589797 HECW2Q9P2P5 1572 aa17.46■□□□□ 0.38
RETREG3-208ENST00000589797 RAD21O60216 631 aa17.45■□□□□ 0.38
RETREG3-208ENST00000589797 SNRPA1P09661 255 aaKnown RBP17.45■□□□□ 0.38
RETREG3-208ENST00000589797 PSMA5P28066 241 aa17.45■□□□□ 0.38
RETREG3-208ENST00000589797 CCDC158Q5M9N0 1113 aa17.45■□□□□ 0.38
RETREG3-208ENST00000589797 RAB11FIP3O75154 756 aa17.45■□□□□ 0.38
RETREG3-208ENST00000589797 CSPP1Q1MSJ5 1256 aa17.45■□□□□ 0.38
RETREG3-208ENST00000589797 LMBR1LQ6UX01 489 aa17.45■□□□□ 0.38
RETREG3-208ENST00000589797 TET3O43151 1660 aa17.45■□□□□ 0.38
RETREG3-208ENST00000589797 PRAMEF22A3QJZ6 481 aa17.45■□□□□ 0.38
RETREG3-208ENST00000589797 GRM8O00222 908 aa17.45■□□□□ 0.38
RETREG3-208ENST00000589797 PHF14O94880 888 aa17.45■□□□□ 0.38
RETREG3-208ENST00000589797 ACSBG1Q96GR2 724 aa17.45■□□□□ 0.38
RETREG3-208ENST00000589797 KIF3AQ9Y496 699 aa17.45■□□□□ 0.38
RETREG3-208ENST00000589797 SBNO1A3KN83 1393 aa17.44■□□□□ 0.38
RETREG3-208ENST00000589797 UNC13BO14795 1591 aa17.44■□□□□ 0.38
RETREG3-208ENST00000589797 G3V3G9 751 aa17.44■□□□□ 0.38
RETREG3-208ENST00000589797 DCAF8Q5TAQ9 597 aa17.44■□□□□ 0.38
RETREG3-208ENST00000589797 KSR2Q6VAB6 950 aa17.44■□□□□ 0.38
RETREG3-208ENST00000589797 RNF17Q9BXT8 1623 aaKnown RBP17.44■□□□□ 0.38
RETREG3-208ENST00000589797 MPHOSPH8Q99549 860 aa17.44■□□□□ 0.38
RETREG3-208ENST00000589797 LRRC2Q9BYS8 371 aa17.44■□□□□ 0.38
RETREG3-208ENST00000589797 MCM2P49736 904 aa17.44■□□□□ 0.38
RETREG3-208ENST00000589797 GOLIM4O00461 696 aa17.43■□□□□ 0.38
RETREG3-208ENST00000589797 RAB11FIP4Q86YS3 637 aa17.43■□□□□ 0.38
RETREG3-208ENST00000589797 ZCRB1Q8TBF4 217 aaKnown RBP17.43■□□□□ 0.38
RETREG3-208ENST00000589797 LRRFIP1Q32MZ4 808 aaKnown RBP17.43■□□□□ 0.38
RETREG3-208ENST00000589797 SYNMO15061 1565 aa17.43■□□□□ 0.38
RETREG3-208ENST00000589797 NECAB1Q8N987 351 aa17.43■□□□□ 0.38
RETREG3-208ENST00000589797 GRPEL1Q9HAV7 217 aa17.43■□□□□ 0.38
RETREG3-208ENST00000589797 NPHP3Q7Z494 1330 aa17.43■□□□□ 0.38
RETREG3-208ENST00000589797 METTL24Q5JXM2 366 aa17.42■□□□□ 0.38
RETREG3-208ENST00000589797 MAP3K4Q9Y6R4 1608 aa17.42■□□□□ 0.38
RETREG3-208ENST00000589797 SYCE3A1L190 88 aa17.42■□□□□ 0.38
RETREG3-208ENST00000589797 STARD3NLO95772 234 aa17.42■□□□□ 0.38
RETREG3-208ENST00000589797 SIRT2Q8IXJ6 389 aa17.42■□□□□ 0.38
RETREG3-208ENST00000589797 CLASP1Q7Z460 1538 aa17.41■□□□□ 0.38
RETREG3-208ENST00000589797 BECN2A8MW95 431 aa17.41■□□□□ 0.38
RETREG3-208ENST00000589797 GUCY1B3Q02153 619 aa17.41■□□□□ 0.38
RETREG3-208ENST00000589797 SYNE3Q6ZMZ3 975 aa17.41■□□□□ 0.38
RETREG3-208ENST00000589797 CWC22Q9HCG8 908 aaKnown RBP17.41■□□□□ 0.38
RETREG3-208ENST00000589797 TRMT112Q9UI30 125 aaKnown RBP17.41■□□□□ 0.38
RETREG3-208ENST00000589797 RASSF8Q8NHQ8 419 aa17.41■□□□□ 0.38
RETREG3-208ENST00000589797 TMX3Q96JJ7 454 aa17.41■□□□□ 0.38
RETREG3-208ENST00000589797 ESYT1Q9BSJ8 1104 aa17.41■□□□□ 0.38
RETREG3-208ENST00000589797 RBM27Q9P2N5 1060 aaKnown RBP17.41■□□□□ 0.38
RETREG3-208ENST00000589797 ABCF2Q9UG63 623 aa17.41■□□□□ 0.38
RETREG3-208ENST00000589797 HAND2P61296 217 aa17.41■□□□□ 0.38
RETREG3-208ENST00000589797 ZNF496Q96IT1 587 aaPredicted RBP17.41■□□□□ 0.38
RETREG3-208ENST00000589797 A1BGP04217 495 aa17.4■□□□□ 0.38
RETREG3-208ENST00000589797 IFIT1P09914 478 aaKnown RBP17.4■□□□□ 0.38
RETREG3-208ENST00000589797 ZNF790Q6PG37 636 aa17.4■□□□□ 0.38
RETREG3-208ENST00000589797 USP44Q9H0E7 712 aa17.4■□□□□ 0.38
RETREG3-208ENST00000589797 CPLX2Q6PUV4 134 aaKnown RBP17.4■□□□□ 0.38
RETREG3-208ENST00000589797 BICC1Q9H694 974 aaKnown RBP17.4■□□□□ 0.38
RETREG3-208ENST00000589797 GSPT1P15170 499 aaKnown RBP17.4■□□□□ 0.38
RETREG3-208ENST00000589797 CCDC82Q8N4S0 544 aa17.4■□□□□ 0.38
RETREG3-208ENST00000589797 PANK2Q9BZ23 570 aa17.4■□□□□ 0.38
RETREG3-208ENST00000589797 TBC1D2BQ9UPU7 963 aa17.4■□□□□ 0.38
RETREG3-208ENST00000589797 EXOC5O00471 708 aa17.39■□□□□ 0.37
RETREG3-208ENST00000589797 USP16Q9Y5T5 823 aa17.39■□□□□ 0.37
RETREG3-208ENST00000589797 HIP1O00291 1037 aa17.39■□□□□ 0.37
RETREG3-208ENST00000589797 PROSER3Q2NL68 480 aa17.39■□□□□ 0.37
RETREG3-208ENST00000589797 TFIP11Q9UBB9 837 aaKnown RBP17.39■□□□□ 0.37
RETREG3-208ENST00000589797 CIZ1Q9ULV3 898 aaPredicted RBP17.39■□□□□ 0.37
RETREG3-208ENST00000589797 AKAP17AQ02040 695 aaKnown RBP17.39■□□□□ 0.37
RETREG3-208ENST00000589797 LINS1Q8NG48 757 aa17.39■□□□□ 0.37
RETREG3-208ENST00000589797 MADDQ8WXG6 1647 aa17.38■□□□□ 0.37
RETREG3-208ENST00000589797 BAG4O95429 457 aaKnown RBP17.38■□□□□ 0.37
RETREG3-208ENST00000589797 EIF4A1P60842 406 aaKnown RBP17.38■□□□□ 0.37
RETREG3-208ENST00000589797 CCT2P78371 535 aaKnown RBP17.38■□□□□ 0.37
RETREG3-208ENST00000589797 IQSEC3Q9UPP2 1182 aaPredicted RBP17.38■□□□□ 0.37
RETREG3-208ENST00000589797 HSP90AB3PQ58FF7 597 aa17.38■□□□□ 0.37
RETREG3-208ENST00000589797 USP26Q9BXU7 913 aa17.38■□□□□ 0.37
RETREG3-208ENST00000589797 SPHKAPQ2M3C7 1700 aa17.37■□□□□ 0.37
RETREG3-208ENST00000589797 LDHAL6AQ6ZMR3 332 aa17.37■□□□□ 0.37
RETREG3-208ENST00000589797 CHAMP1Q96JM3 812 aa17.37■□□□□ 0.37
RETREG3-208ENST00000589797 WDR33Q9C0J8 1336 aaKnown RBP17.37■□□□□ 0.37
RETREG3-208ENST00000589797 A2ML1A8K2U0 1454 aa17.37■□□□□ 0.37
RETREG3-208ENST00000589797 GOLGA6L19H0YKK7 550 aa17.37■□□□□ 0.37
RETREG3-208ENST00000589797 TIMM10P62072 90 aa17.37■□□□□ 0.37
RETREG3-208ENST00000589797 IFIT5Q13325 482 aaKnown RBP17.37■□□□□ 0.37
RETREG3-208ENST00000589797 CAMK4Q16566 473 aa17.37■□□□□ 0.37
RETREG3-208ENST00000589797 HELBQ8NG08 1087 aaPredicted RBP17.37■□□□□ 0.37
RETREG3-208ENST00000589797 EDC3Q96F86 508 aaKnown RBP17.37■□□□□ 0.37
RETREG3-208ENST00000589797 SDF4Q9BRK5 362 aa17.37■□□□□ 0.37
RETREG3-208ENST00000589797 PIBF1Q8WXW3 757 aa17.36■□□□□ 0.37
RETREG3-208ENST00000589797 CEP152O94986 1710 aa17.36■□□□□ 0.37
RETREG3-208ENST00000589797 CHAF1AQ13111 956 aaPredicted RBP17.36■□□□□ 0.37
RETREG3-208ENST00000589797 ABCC4O15439 1325 aa17.36■□□□□ 0.37
RETREG3-208ENST00000589797 GOLGA6L6A8MZA4 724 aa17.36■□□□□ 0.37
RETREG3-208ENST00000589797 CHMLP26374 656 aa17.36■□□□□ 0.37
RETREG3-208ENST00000589797 CWC25Q9NXE8 425 aaPredicted RBP17.36■□□□□ 0.37
RETREG3-208ENST00000589797 TRIM29Q14134 588 aa17.35■□□□□ 0.37
RETREG3-208ENST00000589797 SIRT1Q96EB6 747 aa17.35■□□□□ 0.37
RETREG3-208ENST00000589797 SPC24Q8NBT2 197 aa17.35■□□□□ 0.37
RETREG3-208ENST00000589797 SOS1Q07889 1333 aaPredicted RBP17.35■□□□□ 0.37
RETREG3-208ENST00000589797 NGLY1Q96IV0 654 aa17.35■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 113.7 ms