RNA–Protein interactions for RNA: ENST00000589575.5

PTBP1-214, Transcript of polypyrimidine tract binding protein 1, humanhuman

TSL 3

Gene PTBP1, Length 749 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTBP1-214ENST00000589575 MYBBP1AQ9BQG0 1328 aaKnown RBP17.31■□□□□ 0.36
PTBP1-214ENST00000589575 TJP1Q07157 1748 aa17.31■□□□□ 0.36
PTBP1-214ENST00000589575 KCNQ3O43525 872 aa17.31■□□□□ 0.36
PTBP1-214ENST00000589575 COL15A1P39059 1388 aa17.3■□□□□ 0.36
PTBP1-214ENST00000589575 NFE2L2Q16236 605 aa17.29■□□□□ 0.36
PTBP1-214ENST00000589575 PLEKHF1Q96S99 279 aa17.29■□□□□ 0.36
PTBP1-214ENST00000589575 NARFQ9UHQ1 456 aa17.29■□□□□ 0.36
PTBP1-214ENST00000589575 CICQ96RK0 1608 aaPredicted RBP17.29■□□□□ 0.36
PTBP1-214ENST00000589575 A0A087WZG4 1122 aa17.28■□□□□ 0.36
PTBP1-214ENST00000589575 TGFB2P61812 414 aa17.28■□□□□ 0.36
PTBP1-214ENST00000589575 TAF7Q15545 349 aaPredicted RBP17.28■□□□□ 0.36
PTBP1-214ENST00000589575 A1BGP04217 495 aa17.27■□□□□ 0.36
PTBP1-214ENST00000589575 WDR43Q15061 677 aaKnown RBP eCLIP17.27■□□□□ 0.368e-6■■□□□ 11.7
PTBP1-214ENST00000589575 MYH14Q7Z406 1995 aaKnown RBP17.27■□□□□ 0.36
PTBP1-214ENST00000589575 UTRNP46939 3433 aa17.26■□□□□ 0.35
PTBP1-214ENST00000589575 A0A0G2JLW4 131 aa17.26■□□□□ 0.35
PTBP1-214ENST00000589575 SNRPA1P09661 255 aaKnown RBP17.26■□□□□ 0.35
PTBP1-214ENST00000589575 EIF5P55010 431 aaKnown RBP17.26■□□□□ 0.35
PTBP1-214ENST00000589575 DDR1Q08345 913 aa17.26■□□□□ 0.35
PTBP1-214ENST00000589575 ZNF784Q8NCA9 323 aaPredicted RBP17.26■□□□□ 0.35
PTBP1-214ENST00000589575 MIS18AQ9NYP9 233 aa17.26■□□□□ 0.35
PTBP1-214ENST00000589575 C10orf71Q711Q0 1435 aa17.25■□□□□ 0.35
PTBP1-214ENST00000589575 BICDL1Q6ZP65 573 aa17.25■□□□□ 0.35
PTBP1-214ENST00000589575 PNISRQ8TF01 805 aaKnown RBP17.25■□□□□ 0.35
PTBP1-214ENST00000589575 USP16Q9Y5T5 823 aa17.25■□□□□ 0.35
PTBP1-214ENST00000589575 POLRMTO00411 1230 aaKnown RBP17.24■□□□□ 0.35
PTBP1-214ENST00000589575 DPEP1P16444 411 aa17.24■□□□□ 0.35
PTBP1-214ENST00000589575 TM4SF1P30408 202 aa17.24■□□□□ 0.35
PTBP1-214ENST00000589575 IL6STP40189 918 aaPredicted RBP17.24■□□□□ 0.35
PTBP1-214ENST00000589575 NFIXQ14938 502 aa17.24■□□□□ 0.35
PTBP1-214ENST00000589575 THUMPD2Q9BTF0 503 aaKnown RBP17.24■□□□□ 0.35
PTBP1-214ENST00000589575 TBC1D2BQ9UPU7 963 aa17.24■□□□□ 0.35
PTBP1-214ENST00000589575 BCS1LQ9Y276 419 aa17.24■□□□□ 0.35
PTBP1-214ENST00000589575 C4AP0C0L4 1744 aa17.24■□□□□ 0.35
PTBP1-214ENST00000589575 PRAMEF22A3QJZ6 481 aa17.23■□□□□ 0.35
PTBP1-214ENST00000589575 PIP4K2AP48426 406 aaPredicted RBP17.23■□□□□ 0.35
PTBP1-214ENST00000589575 RIPK4P57078 832 aa17.23■□□□□ 0.35
PTBP1-214ENST00000589575 CCDC146Q8IYE0 955 aa17.23■□□□□ 0.35
PTBP1-214ENST00000589575 VIRMAQ69YN4 1812 aaKnown RBP17.23■□□□□ 0.35
PTBP1-214ENST00000589575 PXDNLA1KZ92 1463 aa17.23■□□□□ 0.35
PTBP1-214ENST00000589575 UBR2Q8IWV8 1755 aa17.23■□□□□ 0.35
PTBP1-214ENST00000589575 PRKRIP1Q9H875 184 aaPredicted RBP17.22■□□□□ 0.35
PTBP1-214ENST00000589575 BCL2L12Q9HB09 334 aa17.22■□□□□ 0.35
PTBP1-214ENST00000589575 SERPINB2P05120 415 aa17.21■□□□□ 0.35
PTBP1-214ENST00000589575 LMOD3Q0VAK6 560 aa17.21■□□□□ 0.35
PTBP1-214ENST00000589575 DZIP3Q86Y13 1208 aaKnown RBP17.21■□□□□ 0.35
PTBP1-214ENST00000589575 NPHP1O15259 732 aa17.2■□□□□ 0.34
PTBP1-214ENST00000589575 NEUROD2Q15784 382 aa17.2■□□□□ 0.34
PTBP1-214ENST00000589575 RRP7AQ9Y3A4 280 aaKnown RBP17.2■□□□□ 0.34
PTBP1-214ENST00000589575 GOLGB1Q14789 3259 aaKnown RBP17.2■□□□□ 0.34
PTBP1-214ENST00000589575 SIPA1L3O60292 1781 aaPredicted RBP17.2■□□□□ 0.34
PTBP1-214ENST00000589575 CHRNA5P30532 468 aa17.19■□□□□ 0.34
PTBP1-214ENST00000589575 TMPOP42166 694 aaKnown RBP17.19■□□□□ 0.34
PTBP1-214ENST00000589575 TBC1D9BQ66K14 1250 aa17.19■□□□□ 0.34
PTBP1-214ENST00000589575 PIM2Q9P1W9 311 aa17.19■□□□□ 0.34
PTBP1-214ENST00000589575 TSPYL4Q9UJ04 414 aa17.19■□□□□ 0.34
PTBP1-214ENST00000589575 ARHGAP27Q6ZUM4 889 aa17.18■□□□□ 0.34
PTBP1-214ENST00000589575 CAMTA2O94983 1202 aa17.17■□□□□ 0.34
PTBP1-214ENST00000589575 EIF4A1P60842 406 aaKnown RBP17.17■□□□□ 0.34
PTBP1-214ENST00000589575 DALRD3Q5D0E6 543 aaKnown RBP17.17■□□□□ 0.34
PTBP1-214ENST00000589575 RUNDC1Q96C34 613 aa17.17■□□□□ 0.34
PTBP1-214ENST00000589575 SETDB2Q96T68 719 aa17.17■□□□□ 0.34
PTBP1-214ENST00000589575 ZNF652Q9Y2D9 606 aa17.17■□□□□ 0.34
PTBP1-214ENST00000589575 KCNA3P22001 575 aa17.16■□□□□ 0.34
PTBP1-214ENST00000589575 NGEFQ8N5V2 710 aa17.16■□□□□ 0.34
PTBP1-214ENST00000589575 ADAMTS8Q9UP79 889 aa17.16■□□□□ 0.34
PTBP1-214ENST00000589575 GIGYF1O75420 1035 aaPredicted RBP17.15■□□□□ 0.34
PTBP1-214ENST00000589575 CARMIL3Q8ND23 1372 aa17.15■□□□□ 0.34
PTBP1-214ENST00000589575 CHD4Q14839 1912 aa17.14■□□□□ 0.33
PTBP1-214ENST00000589575 ZNF316A6NFI3 1004 aaPredicted RBP17.14■□□□□ 0.33
PTBP1-214ENST00000589575 NBPF26B4DH59 902 aa17.14■□□□□ 0.33
PTBP1-214ENST00000589575 NBPF10Q6P3W6 841 aaKnown RBP17.14■□□□□ 0.33
PTBP1-214ENST00000589575 C2CD5Q86YS7 1000 aa17.14■□□□□ 0.33
PTBP1-214ENST00000589575 NBPF15Q8N660 670 aa17.14■□□□□ 0.33
PTBP1-214ENST00000589575 ZNF526Q8TF50 670 aaPredicted RBP17.14■□□□□ 0.33
PTBP1-214ENST00000589575 LAS1LQ9Y4W2 734 aaKnown RBP17.14■□□□□ 0.33
PTBP1-214ENST00000589575 H0YIN7 160 aa17.13■□□□□ 0.33
PTBP1-214ENST00000589575 CCDC24Q8N4L8 307 aa17.13■□□□□ 0.33
PTBP1-214ENST00000589575 CNBD1Q8NA66 436 aa17.13■□□□□ 0.33
PTBP1-214ENST00000589575 MYL6BP14649 208 aa17.12■□□□□ 0.33
PTBP1-214ENST00000589575 ST5P78524 1137 aa17.12■□□□□ 0.33
PTBP1-214ENST00000589575 CLEC4GQ6UXB4 293 aa17.12■□□□□ 0.33
PTBP1-214ENST00000589575 N4BP2Q86UW6 1770 aaPredicted RBP17.12■□□□□ 0.33
PTBP1-214ENST00000589575 KIF13BQ9NQT8 1826 aa17.12■□□□□ 0.33
PTBP1-214ENST00000589575 ATP10DQ9P241 1426 aa17.12■□□□□ 0.33
PTBP1-214ENST00000589575 EIF2S2P20042 333 aaKnown RBP17.11■□□□□ 0.33
PTBP1-214ENST00000589575 PDE6BP35913 854 aa17.11■□□□□ 0.33
PTBP1-214ENST00000589575 PRR5LQ6MZQ0 368 aa17.11■□□□□ 0.33
PTBP1-214ENST00000589575 KIF6Q6ZMV9 814 aa17.11■□□□□ 0.33
PTBP1-214ENST00000589575 NBPF5PQ86XG9 351 aaPredicted RBP17.11■□□□□ 0.33
PTBP1-214ENST00000589575 GPBP1L1Q9HC44 474 aaPredicted RBP17.11■□□□□ 0.33
PTBP1-214ENST00000589575 BABAM1Q9NWV8 329 aa17.11■□□□□ 0.33
PTBP1-214ENST00000589575 NIP7Q9Y221 180 aaKnown RBP eCLIP17.11■□□□□ 0.33
PTBP1-214ENST00000589575 FAM177BA6PVY3 158 aa17.1■□□□□ 0.33
PTBP1-214ENST00000589575 TTLL6Q8N841 843 aa17.1■□□□□ 0.33
PTBP1-214ENST00000589575 ZNF622Q969S3 477 aaKnown RBP eCLIP17.1■□□□□ 0.33
PTBP1-214ENST00000589575 BRIP1Q9BX63 1249 aa17.1■□□□□ 0.33
PTBP1-214ENST00000589575 DLG5Q8TDM6 1919 aa17.08■□□□□ 0.33
PTBP1-214ENST00000589575 KIAA1551Q9HCM1 1747 aa17.08■□□□□ 0.32
PTBP1-214ENST00000589575 SCN7AQ01118 1682 aa17.08■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 110 ms