RNA–Protein interactions for RNA: ENST00000589333.2

UCA1-202, Transcript of urothelial cancer associated 1, humanhuman

TSL 3

Gene UCA1, Length 433 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UCA1-202ENST00000589333 FAM9BQ8IZU0 186 aa8.36□□□□□ -1.07
UCA1-202ENST00000589333 GPHNQ9NQX3 736 aaPredicted RBP8.36□□□□□ -1.07
UCA1-202ENST00000589333 HCSTQ9UBK5 93 aa8.36□□□□□ -1.07
UCA1-202ENST00000589333 KDM3BQ7LBC6 1761 aa8.35□□□□□ -1.07
UCA1-202ENST00000589333 BARGINQ6ZT62 677 aa8.35□□□□□ -1.07
UCA1-202ENST00000589333 KCTD12Q96CX2 325 aaKnown RBP8.35□□□□□ -1.07
UCA1-202ENST00000589333 PHACTR3Q96KR7 559 aa8.35□□□□□ -1.07
UCA1-202ENST00000589333 NLRP2Q9NX02 1062 aa8.35□□□□□ -1.07
UCA1-202ENST00000589333 RGS17Q9UGC6 210 aaPredicted RBP8.35□□□□□ -1.07
UCA1-202ENST00000589333 RGS12O14924 1447 aa8.35□□□□□ -1.07
UCA1-202ENST00000589333 KDM6AO15550 1401 aaPredicted RBP8.35□□□□□ -1.07
UCA1-202ENST00000589333 NHSQ6T4R5 1651 aa8.34□□□□□ -1.07
UCA1-202ENST00000589333 ITGB4P16144 1822 aa8.34□□□□□ -1.07
UCA1-202ENST00000589333 SBF2Q86WG5 1849 aa8.34□□□□□ -1.07
UCA1-202ENST00000589333 NKX1-1Q15270 411 aaPredicted RBP8.34□□□□□ -1.07
UCA1-202ENST00000589333 CCDC146Q8IYE0 955 aa8.34□□□□□ -1.07
UCA1-202ENST00000589333 TCP11L2Q8N4U5 519 aa8.34□□□□□ -1.07
UCA1-202ENST00000589333 RUNDC1Q96C34 613 aa8.34□□□□□ -1.07
UCA1-202ENST00000589333 KCNK17Q96T54 332 aa8.34□□□□□ -1.07
UCA1-202ENST00000589333 THRAP3Q9Y2W1 955 aaKnown RBP8.34□□□□□ -1.07
UCA1-202ENST00000589333 UBR2Q8IWV8 1755 aa8.34□□□□□ -1.07
UCA1-202ENST00000589333 ZNF521Q96K83 1311 aa8.33□□□□□ -1.08
UCA1-202ENST00000589333 IL2RBP14784 551 aa8.33□□□□□ -1.08
UCA1-202ENST00000589333 EVA1CP58658 441 aa8.33□□□□□ -1.08
UCA1-202ENST00000589333 UPF1Q92900 1129 aaKnown RBP eCLIP8.33□□□□□ -1.08
UCA1-202ENST00000589333 TRPC5Q9UL62 973 aaPredicted RBP8.33□□□□□ -1.08
UCA1-202ENST00000589333 MAP3K5Q99683 1374 aa8.33□□□□□ -1.08
UCA1-202ENST00000589333 CICQ96RK0 1608 aaPredicted RBP8.32□□□□□ -1.08
UCA1-202ENST00000589333 TK2O00142 265 aa8.32□□□□□ -1.08
UCA1-202ENST00000589333 MTHFSDQ2M296 383 aaKnown RBP8.32□□□□□ -1.08
UCA1-202ENST00000589333 ZNF772Q68DY9 489 aaPredicted RBP8.32□□□□□ -1.08
UCA1-202ENST00000589333 HS6ST3Q8IZP7 471 aa8.32□□□□□ -1.08
UCA1-202ENST00000589333 GJD4Q96KN9 370 aaPredicted RBP8.32□□□□□ -1.08
UCA1-202ENST00000589333 USP35Q9P2H5 1018 aa8.32□□□□□ -1.08
UCA1-202ENST00000589333 CEMIPQ8WUJ3 1361 aa8.32□□□□□ -1.08
UCA1-202ENST00000589333 TNS1Q9HBL0 1735 aaKnown RBP8.32□□□□□ -1.08
UCA1-202ENST00000589333 PCDH11XQ9BZA7 1347 aa8.31□□□□□ -1.08
UCA1-202ENST00000589333 PCDH11YQ9BZA8 1340 aa8.31□□□□□ -1.08
UCA1-202ENST00000589333 MAPK8IP3Q9UPT6 1336 aa8.31□□□□□ -1.08
UCA1-202ENST00000589333 BCL9O00512 1426 aa8.31□□□□□ -1.08
UCA1-202ENST00000589333 PSDA5PKW4 1024 aaPredicted RBP8.31□□□□□ -1.08
UCA1-202ENST00000589333 APAF1O14727 1248 aa8.31□□□□□ -1.08
UCA1-202ENST00000589333 CYP27B1O15528 508 aa8.31□□□□□ -1.08
UCA1-202ENST00000589333 ONECUT3O60422 494 aaPredicted RBP8.31□□□□□ -1.08
UCA1-202ENST00000589333 TATP17735 454 aaPredicted RBP8.31□□□□□ -1.08
UCA1-202ENST00000589333 TMPOP42166 694 aaKnown RBP8.31□□□□□ -1.08
UCA1-202ENST00000589333 NFE2L2Q16236 605 aa8.31□□□□□ -1.08
UCA1-202ENST00000589333 PPP4R3BQ5MIZ7 849 aa8.31□□□□□ -1.08
UCA1-202ENST00000589333 RAPGEF4Q8WZA2 1011 aa8.31□□□□□ -1.08
UCA1-202ENST00000589333 ZBED9Q6R2W3 1325 aa8.3□□□□□ -1.08
UCA1-202ENST00000589333 FAM98CQ17RN3 349 aaKnown RBP8.3□□□□□ -1.08
UCA1-202ENST00000589333 CCDC27Q2M243 656 aa8.3□□□□□ -1.08
UCA1-202ENST00000589333 AMOTQ4VCS5 1084 aa8.3□□□□□ -1.08
UCA1-202ENST00000589333 POTEAQ6S8J7 498 aa8.3□□□□□ -1.08
UCA1-202ENST00000589333 GAS2L2Q8NHY3 880 aa8.3□□□□□ -1.08
UCA1-202ENST00000589333 CDCA7Q9BWT1 371 aaPredicted RBP8.3□□□□□ -1.08
UCA1-202ENST00000589333 PNNQ9H307 717 aaKnown RBP8.3□□□□□ -1.08
UCA1-202ENST00000589333 BTAF1O14981 1849 aa8.3□□□□□ -1.08
UCA1-202ENST00000589333 LAMB4A4D0S4 1761 aa8.3□□□□□ -1.08
UCA1-202ENST00000589333 PHKG2P15735 406 aa8.29□□□□□ -1.08
UCA1-202ENST00000589333 ZNF530Q6P9A1 599 aaPredicted RBP8.29□□□□□ -1.08
UCA1-202ENST00000589333 QTRT2Q9H974 415 aaKnown RBP8.29□□□□□ -1.08
UCA1-202ENST00000589333 RRP7AQ9Y3A4 280 aaKnown RBP8.29□□□□□ -1.08
UCA1-202ENST00000589333 CCDC9Q9Y3X0 531 aaKnown RBP8.29□□□□□ -1.08
UCA1-202ENST00000589333 C5P01031 1676 aa8.29□□□□□ -1.08
UCA1-202ENST00000589333 RGPD3A6NKT7 1758 aaPredicted RBP8.28□□□□□ -1.08
UCA1-202ENST00000589333 RGPD4Q7Z3J3 1758 aa8.28□□□□□ -1.08
UCA1-202ENST00000589333 ZNF831Q5JPB2 1677 aa8.28□□□□□ -1.08
UCA1-202ENST00000589333 SENP3-EIF4A1A0A087X0R7 540 aa8.28□□□□□ -1.08
UCA1-202ENST00000589333 RBM6P78332 1123 aaKnown RBP8.28□□□□□ -1.08
UCA1-202ENST00000589333 HNRNPUQ00839 825 aaKnown RBP eCLIP8.28□□□□□ -1.08
UCA1-202ENST00000589333 PLEKHO1Q53GL0 409 aaPredicted RBP8.28□□□□□ -1.08
UCA1-202ENST00000589333 AKAP4Q5JQC9 854 aa8.28□□□□□ -1.08
UCA1-202ENST00000589333 ZCRB1Q8TBF4 217 aaKnown RBP8.28□□□□□ -1.08
UCA1-202ENST00000589333 OXER1Q8TDS5 423 aa8.28□□□□□ -1.08
UCA1-202ENST00000589333 SPG7Q9UQ90 795 aa8.28□□□□□ -1.08
UCA1-202ENST00000589333 VPS9D1Q9Y2B5 631 aa8.28□□□□□ -1.08
UCA1-202ENST00000589333 LY75O60449 1722 aa8.28□□□□□ -1.08
UCA1-202ENST00000589333 TJP1Q07157 1748 aa8.28□□□□□ -1.08
UCA1-202ENST00000589333 KCPQ6ZWJ8 1503 aa8.28□□□□□ -1.08
UCA1-202ENST00000589333 PTPN5P54829 565 aa8.27□□□□□ -1.09
UCA1-202ENST00000589333 WWC1Q8IX03 1113 aa8.27□□□□□ -1.09
UCA1-202ENST00000589333 NGEFQ8N5V2 710 aa8.27□□□□□ -1.09
UCA1-202ENST00000589333 ZNF454Q8N9F8 522 aa8.27□□□□□ -1.09
UCA1-202ENST00000589333 MARCH10Q8NA82 808 aaPredicted RBP8.27□□□□□ -1.09
UCA1-202ENST00000589333 COL5A3P25940 1745 aaPredicted RBP8.26□□□□□ -1.09
UCA1-202ENST00000589333 GNAT3A8MTJ3 354 aa8.26□□□□□ -1.09
UCA1-202ENST00000589333 HTATSF1O43719 755 aaKnown RBP8.26□□□□□ -1.09
UCA1-202ENST00000589333 NEFMP07197 916 aa8.26□□□□□ -1.09
UCA1-202ENST00000589333 RIPK4P57078 832 aa8.26□□□□□ -1.09
UCA1-202ENST00000589333 DCTN1Q14203 1278 aa8.26□□□□□ -1.09
UCA1-202ENST00000589333 DDB1Q16531 1140 aa8.26□□□□□ -1.09
UCA1-202ENST00000589333 SEPT12Q8IYM1 358 aa8.26□□□□□ -1.09
UCA1-202ENST00000589333 IFNL2Q8IZJ0 200 aa8.26□□□□□ -1.09
UCA1-202ENST00000589333 IL17REQ8NFR9 667 aa8.26□□□□□ -1.09
UCA1-202ENST00000589333 THUMPD2Q9BTF0 503 aaKnown RBP8.26□□□□□ -1.09
UCA1-202ENST00000589333 RREB1Q92766 1687 aa8.25□□□□□ -1.09
UCA1-202ENST00000589333 RNMTO43148 476 aaKnown RBP8.25□□□□□ -1.09
UCA1-202ENST00000589333 LMOD3Q0VAK6 560 aa8.25□□□□□ -1.09
UCA1-202ENST00000589333 NEUROD2Q15784 382 aa8.25□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 133.9 ms