RNA–Protein interactions for RNA: ENST00000589266.5

CIRBP-223, Transcript of cold inducible RNA binding protein, human

TSL 3

Gene CIRBP, Length 616 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CIRBP-223	ENST00000589266	THUMPD2	Q9BTF0	503 aa	Known RBP	32.63	■■■□□ 2.81
CIRBP-223	ENST00000589266	IFT57	Q9NWB7	429 aa		32.63	■■■□□ 2.81
CIRBP-223	ENST00000589266		E9PSI1	815 aa		32.61	■■■□□ 2.81
CIRBP-223	ENST00000589266	GNAI1	P63096	354 aa		32.61	■■■□□ 2.81
CIRBP-223	ENST00000589266	CFAP44	Q96MT7	982 aa		32.61	■■■□□ 2.81
CIRBP-223	ENST00000589266	SLC52A2	Q9HAB3	445 aa		32.61	■■■□□ 2.81
CIRBP-223	ENST00000589266	ZNF853	P0CG23	659 aa		32.6	■■■□□ 2.81
CIRBP-223	ENST00000589266	TAF7	Q15545	349 aa	Predicted RBP	32.6	■■■□□ 2.81
CIRBP-223	ENST00000589266	SIPA1L3	O60292	1781 aa	Predicted RBP	32.6	■■■□□ 2.81
CIRBP-223	ENST00000589266	LOC102724428	A0A0B4J2F2	783 aa		32.59	■■■□□ 2.81
CIRBP-223	ENST00000589266	SIK1	P57059	783 aa		32.59	■■■□□ 2.81
CIRBP-223	ENST00000589266	CABP4	P57796	275 aa		32.58	■■■□□ 2.81
CIRBP-223	ENST00000589266	SLFN5	Q08AF3	891 aa		32.58	■■■□□ 2.81
CIRBP-223	ENST00000589266	CHL1	O00533	1208 aa		32.57	■■■□□ 2.8
CIRBP-223	ENST00000589266	LINC00116	Q8NCU8	138 aa		32.57	■■■□□ 2.8
CIRBP-223	ENST00000589266	MYH16	Q9H6N6	1097 aa		32.57	■■■□□ 2.8
CIRBP-223	ENST00000589266	APLP1	P51693	650 aa		32.56	■■■□□ 2.8
CIRBP-223	ENST00000589266	TRMT2A	Q8IZ69	625 aa	Known RBP	32.56	■■■□□ 2.8
CIRBP-223	ENST00000589266	GNPAT	O15228	680 aa		32.53	■■■□□ 2.8
CIRBP-223	ENST00000589266	NFATC2IP	Q8NCF5	419 aa		32.53	■■■□□ 2.8
CIRBP-223	ENST00000589266	CDCA7L	Q96GN5	454 aa		32.52	■■■□□ 2.8
CIRBP-223	ENST00000589266	SPINK5	Q9NQ38	1064 aa	Predicted RBP	32.52	■■■□□ 2.8
CIRBP-223	ENST00000589266	TMOD3	Q9NYL9	352 aa		32.52	■■■□□ 2.8
CIRBP-223	ENST00000589266	CIC	Q96RK0	1608 aa	Predicted RBP	32.51	■■■□□ 2.8
CIRBP-223	ENST00000589266	MMP10	P09238	476 aa		32.51	■■■□□ 2.79
CIRBP-223	ENST00000589266	BTBD11	A6QL63	1104 aa		32.5	■■■□□ 2.79
CIRBP-223	ENST00000589266	TOMM70	O94826	608 aa		32.5	■■■□□ 2.79
CIRBP-223	ENST00000589266	ATP6V1A	P38606	617 aa		32.5	■■■□□ 2.79
CIRBP-223	ENST00000589266	ITPK1	Q13572	414 aa		32.49	■■■□□ 2.79
CIRBP-223	ENST00000589266	TSPYL4	Q9UJ04	414 aa		32.49	■■■□□ 2.79
CIRBP-223	ENST00000589266	KDM3B	Q7LBC6	1761 aa		32.48	■■■□□ 2.79
CIRBP-223	ENST00000589266	TGFB2	P61812	414 aa		32.48	■■■□□ 2.79
CIRBP-223	ENST00000589266	MBIP	Q9NS73	344 aa		32.48	■■■□□ 2.79
CIRBP-223	ENST00000589266	ASAP1	Q9ULH1	1129 aa		32.48	■■■□□ 2.79
CIRBP-223	ENST00000589266	LAS1L	Q9Y4W2	734 aa	Known RBP	32.48	■■■□□ 2.79
CIRBP-223	ENST00000589266	DUSP27	Q5VZP5	1158 aa		32.47	■■■□□ 2.79
CIRBP-223	ENST00000589266	BCS1L	Q9Y276	419 aa		32.47	■■■□□ 2.79
CIRBP-223	ENST00000589266	FANCI	Q9NVI1	1328 aa		32.47	■■■□□ 2.79
CIRBP-223	ENST00000589266	PXDNL	A1KZ92	1463 aa		32.46	■■■□□ 2.79
CIRBP-223	ENST00000589266	DNAJC5G	Q8N7S2	189 aa		32.45	■■■□□ 2.79
CIRBP-223	ENST00000589266	KIF13B	Q9NQT8	1826 aa		32.44	■■■□□ 2.78
CIRBP-223	ENST00000589266	ZNF790	Q6PG37	636 aa		32.43	■■■□□ 2.78
CIRBP-223	ENST00000589266	NLGN1	Q8N2Q7	840 aa		32.43	■■■□□ 2.78
CIRBP-223	ENST00000589266		A0A0G2JLW4	131 aa		32.42	■■■□□ 2.78
CIRBP-223	ENST00000589266	TRAPPC3L	Q5T215	181 aa		32.42	■■■□□ 2.78
CIRBP-223	ENST00000589266	ARHGAP27	Q6ZUM4	889 aa		32.42	■■■□□ 2.78
CIRBP-223	ENST00000589266	TSR2	Q969E8	191 aa	Known RBP	32.42	■■■□□ 2.78
CIRBP-223	ENST00000589266	MIS18A	Q9NYP9	233 aa		32.42	■■■□□ 2.78
CIRBP-223	ENST00000589266	N4BP2	Q86UW6	1770 aa	Predicted RBP	32.41	■■■□□ 2.78
CIRBP-223	ENST00000589266	ATG3	Q9NT62	314 aa		32.41	■■■□□ 2.78
CIRBP-223	ENST00000589266	RTCB	Q9Y3I0	505 aa	Known RBP	32.41	■■■□□ 2.78
CIRBP-223	ENST00000589266	TTC5	Q8N0Z6	440 aa		32.4	■■■□□ 2.78
CIRBP-223	ENST00000589266	SOS1	Q07889	1333 aa	Predicted RBP	32.39	■■■□□ 2.78
CIRBP-223	ENST00000589266	KIAA1551	Q9HCM1	1747 aa		32.38	■■■□□ 2.77
CIRBP-223	ENST00000589266	CT47B1	P0C2W7	299 aa	Predicted RBP	32.38	■■■□□ 2.77
CIRBP-223	ENST00000589266	NMRK2	Q9NPI5	230 aa		32.38	■■■□□ 2.77
CIRBP-223	ENST00000589266	UBR2	Q8IWV8	1755 aa		32.37	■■■□□ 2.77
CIRBP-223	ENST00000589266	EIF4A1	P60842	406 aa	Known RBP	32.37	■■■□□ 2.77
CIRBP-223	ENST00000589266	CCDC87	Q9NVE4	849 aa		32.37	■■■□□ 2.77
CIRBP-223	ENST00000589266	C10orf71	Q711Q0	1435 aa		32.36	■■■□□ 2.77
CIRBP-223	ENST00000589266	HEG1	Q9ULI3	1381 aa		32.35	■■■□□ 2.77
CIRBP-223	ENST00000589266	DPEP1	P16444	411 aa		32.35	■■■□□ 2.77
CIRBP-223	ENST00000589266	SLC39A6	Q13433	755 aa		32.35	■■■□□ 2.77
CIRBP-223	ENST00000589266	ADRA2B	P18089	450 aa		32.34	■■■□□ 2.77
CIRBP-223	ENST00000589266	EXOSC9	Q06265	439 aa	Known RBP	32.34	■■■□□ 2.77
CIRBP-223	ENST00000589266	FMNL2	Q96PY5	1086 aa		32.34	■■■□□ 2.77
CIRBP-223	ENST00000589266	KCNQ3	O43525	872 aa		32.33	■■■□□ 2.77
CIRBP-223	ENST00000589266	HOXB7	P09629	217 aa		32.33	■■■□□ 2.77
CIRBP-223	ENST00000589266	RC3H1	Q5TC82	1133 aa	Known RBP	32.33	■■■□□ 2.77
CIRBP-223	ENST00000589266	RBM46	Q8TBY0	533 aa	Known RBP	32.33	■■■□□ 2.77
CIRBP-223	ENST00000589266	ARHGEF1	Q92888	912 aa	Known RBP	32.33	■■■□□ 2.77
CIRBP-223	ENST00000589266	KCP	Q6ZWJ8	1503 aa		32.32	■■■□□ 2.76
CIRBP-223	ENST00000589266	PARP3	Q9Y6F1	533 aa		32.32	■■■□□ 2.76
CIRBP-223	ENST00000589266	C16orf71	Q8IYS4	520 aa	Predicted RBP	32.31	■■■□□ 2.76
CIRBP-223	ENST00000589266	ZNF428	Q96B54	188 aa		32.31	■■■□□ 2.76
CIRBP-223	ENST00000589266	RBM42	Q9BTD8	480 aa	Known RBP	32.31	■■■□□ 2.76
CIRBP-223	ENST00000589266	CHMP4A	Q9BY43	222 aa		32.31	■■■□□ 2.76
CIRBP-223	ENST00000589266	CENPB	P07199	599 aa	Predicted RBP	32.3	■■■□□ 2.76
CIRBP-223	ENST00000589266	RFC4	P35249	363 aa		32.3	■■■□□ 2.76
CIRBP-223	ENST00000589266	VSIG10	Q8N0Z9	540 aa		32.3	■■■□□ 2.76
CIRBP-223	ENST00000589266	ZNF496	Q96IT1	587 aa	Predicted RBP	32.3	■■■□□ 2.76
CIRBP-223	ENST00000589266	SLC4A9	Q96Q91	983 aa		32.3	■■■□□ 2.76
CIRBP-223	ENST00000589266	GYS1	P13807	737 aa		32.29	■■■□□ 2.76
CIRBP-223	ENST00000589266	C9orf131	Q5VYM1	1079 aa		32.29	■■■□□ 2.76
CIRBP-223	ENST00000589266	C8orf58	Q8NAV2	365 aa		32.29	■■■□□ 2.76
CIRBP-223	ENST00000589266	C4A	P0C0L4	1744 aa		32.29	■■■□□ 2.76
CIRBP-223	ENST00000589266	BRCA1	P38398	1863 aa	Known RBP	32.27	■■■□□ 2.76
CIRBP-223	ENST00000589266	WDR90	Q96KV7	1748 aa		32.27	■■■□□ 2.76
CIRBP-223	ENST00000589266	RPS6KA4	O75676	772 aa		32.27	■■■□□ 2.76
CIRBP-223	ENST00000589266	TWISTNB	Q3B726	338 aa	Predicted RBP	32.27	■■■□□ 2.76
CIRBP-223	ENST00000589266	ZNF831	Q5JPB2	1677 aa		32.27	■■■□□ 2.76
CIRBP-223	ENST00000589266	CNTNAP4	Q9C0A0	1308 aa		32.26	■■■□□ 2.76
CIRBP-223	ENST00000589266	SNRPA1	P09661	255 aa	Known RBP	32.26	■■■□□ 2.75
CIRBP-223	ENST00000589266	VAMP4	O75379	141 aa		32.25	■■■□□ 2.75
CIRBP-223	ENST00000589266	KCNA3	P22001	575 aa		32.25	■■■□□ 2.75
CIRBP-223	ENST00000589266	KLRG1	Q96E93	195 aa		32.25	■■■□□ 2.75
CIRBP-223	ENST00000589266	PIM2	Q9P1W9	311 aa		32.25	■■■□□ 2.75
CIRBP-223	ENST00000589266	FSTL1	Q12841	308 aa		32.24	■■■□□ 2.75
CIRBP-223	ENST00000589266	TEX13A	Q9BXU3	409 aa	Predicted RBP	32.24	■■■□□ 2.75
CIRBP-223	ENST00000589266	ARFGEF1	Q9Y6D6	1849 aa		32.23	■■■□□ 2.75

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