RNA–Protein interactions for RNA: ENST00000589201.1

LINC00654-202, long intergenic non-protein coding RNA 654, humanhuman

TSL 3 BASIC

Gene LINC00654, Length 579 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00654-202ENST00000589201 RRP7AQ9Y3A4 280 aaKnown RBP26.2■■□□□ 1.78
LINC00654-202ENST00000589201 KLHL34Q8N239 644 aa26.19■■□□□ 1.78
LINC00654-202ENST00000589201 ZBTB1Q9Y2K1 713 aa26.19■■□□□ 1.78
LINC00654-202ENST00000589201 NEUROD2Q15784 382 aa26.18■■□□□ 1.78
LINC00654-202ENST00000589201 SOS1Q07889 1333 aaPredicted RBP26.17■■□□□ 1.78
LINC00654-202ENST00000589201 CANXP27824 592 aaKnown RBP26.17■■□□□ 1.78
LINC00654-202ENST00000589201 GYS1P13807 737 aa26.16■■□□□ 1.78
LINC00654-202ENST00000589201 NLGN1Q8N2Q7 840 aa26.16■■□□□ 1.78
LINC00654-202ENST00000589201 PNISRQ8TF01 805 aaKnown RBP26.16■■□□□ 1.78
LINC00654-202ENST00000589201 SRP68Q9UHB9 627 aaKnown RBP26.16■■□□□ 1.78
LINC00654-202ENST00000589201 C4AP0C0L4 1744 aa26.15■■□□□ 1.78
LINC00654-202ENST00000589201 PRAMEF22A3QJZ6 481 aa26.15■■□□□ 1.78
LINC00654-202ENST00000589201 USP16Q9Y5T5 823 aa26.15■■□□□ 1.78
LINC00654-202ENST00000589201 SNRPA1P09661 255 aaKnown RBP26.14■■□□□ 1.78
LINC00654-202ENST00000589201 USP42Q9H9J4 1324 aaKnown RBP26.14■■□□□ 1.77
LINC00654-202ENST00000589201 A1BGP04217 495 aa26.13■■□□□ 1.77
LINC00654-202ENST00000589201 MMP10P09238 476 aa26.13■■□□□ 1.77
LINC00654-202ENST00000589201 LMOD3Q0VAK6 560 aa26.13■■□□□ 1.77
LINC00654-202ENST00000589201 TRIM35Q9UPQ4 493 aa26.12■■□□□ 1.77
LINC00654-202ENST00000589201 EIF5P55010 431 aaKnown RBP26.11■■□□□ 1.77
LINC00654-202ENST00000589201 COL15A1P39059 1388 aa26.1■■□□□ 1.77
LINC00654-202ENST00000589201 ZPR1O75312 459 aa26.1■■□□□ 1.77
LINC00654-202ENST00000589201 FKBP8Q14318 412 aa26.1■■□□□ 1.77
LINC00654-202ENST00000589201 NLGN2Q8NFZ4 835 aa26.1■■□□□ 1.77
LINC00654-202ENST00000589201 EIF4A1P60842 406 aaKnown RBP26.09■■□□□ 1.77
LINC00654-202ENST00000589201 USPL1Q5W0Q7 1092 aa26.09■■□□□ 1.77
LINC00654-202ENST00000589201 MRS2Q9HD23 443 aa26.09■■□□□ 1.77
LINC00654-202ENST00000589201 NARFQ9UHQ1 456 aa26.09■■□□□ 1.77
LINC00654-202ENST00000589201 KDM3BQ7LBC6 1761 aa26.09■■□□□ 1.77
LINC00654-202ENST00000589201 DCAF8L1A6NGE4 600 aa26.08■■□□□ 1.77
LINC00654-202ENST00000589201 APAF1O14727 1248 aa26.08■■□□□ 1.77
LINC00654-202ENST00000589201 TSPYL4Q9UJ04 414 aa26.08■■□□□ 1.77
LINC00654-202ENST00000589201 CD2APQ9Y5K6 639 aa26.08■■□□□ 1.77
LINC00654-202ENST00000589201 IL6STP40189 918 aaPredicted RBP26.07■■□□□ 1.76
LINC00654-202ENST00000589201 ZNF330Q9Y3S2 320 aaPredicted RBP26.07■■□□□ 1.76
LINC00654-202ENST00000589201 UTRNP46939 3433 aa26.06■■□□□ 1.76
LINC00654-202ENST00000589201 PIP4K2AP48426 406 aaPredicted RBP26.06■■□□□ 1.76
LINC00654-202ENST00000589201 A0A087WZG4 1122 aa26.05■■□□□ 1.76
LINC00654-202ENST00000589201 GIGYF1O75420 1035 aaPredicted RBP26.05■■□□□ 1.76
LINC00654-202ENST00000589201 BCL2L12Q9HB09 334 aa26.05■■□□□ 1.76
LINC00654-202ENST00000589201 BABAM1Q9NWV8 329 aa26.04■■□□□ 1.76
LINC00654-202ENST00000589201 PARP3Q9Y6F1 533 aa26.04■■□□□ 1.76
LINC00654-202ENST00000589201 TM4SF1P30408 202 aa26.03■■□□□ 1.76
LINC00654-202ENST00000589201 TBC1D2BQ9UPU7 963 aa26.03■■□□□ 1.76
LINC00654-202ENST00000589201 GOLGB1Q14789 3259 aaKnown RBP26.02■■□□□ 1.76
LINC00654-202ENST00000589201 NBPF26B4DH59 902 aa26.02■■□□□ 1.76
LINC00654-202ENST00000589201 DDR1Q08345 913 aa26.02■■□□□ 1.76
LINC00654-202ENST00000589201 NBPF10Q6P3W6 841 aaKnown RBP26.02■■□□□ 1.76
LINC00654-202ENST00000589201 NBPF15Q8N660 670 aa26.02■■□□□ 1.76
LINC00654-202ENST00000589201 LAS1LQ9Y4W2 734 aaKnown RBP26.02■■□□□ 1.76
LINC00654-202ENST00000589201 CHL1O00533 1208 aa26.01■■□□□ 1.75
LINC00654-202ENST00000589201 NPM2Q86SE8 214 aaKnown RBP26.01■■□□□ 1.75
LINC00654-202ENST00000589201 NFIXQ14938 502 aa25.99■■□□□ 1.75
LINC00654-202ENST00000589201 GPR162Q16538 588 aa25.99■■□□□ 1.75
LINC00654-202ENST00000589201 POLRMTO00411 1230 aaKnown RBP25.98■■□□□ 1.75
LINC00654-202ENST00000589201 PELP1Q8IZL8 1130 aaKnown RBP25.98■■□□□ 1.75
LINC00654-202ENST00000589201 SENP3-EIF4A1A0A087X0R7 540 aa25.97■■□□□ 1.75
LINC00654-202ENST00000589201 DZIP3Q86Y13 1208 aaKnown RBP25.97■■□□□ 1.75
LINC00654-202ENST00000589201 CAMTA2O94983 1202 aa25.96■■□□□ 1.75
LINC00654-202ENST00000589201 LAMB4A4D0S4 1761 aa25.96■■□□□ 1.75
LINC00654-202ENST00000589201 CFAP44Q96MT7 982 aa25.95■■□□□ 1.74
LINC00654-202ENST00000589201 TBC1D9BQ66K14 1250 aa25.94■■□□□ 1.74
LINC00654-202ENST00000589201 BICDL1Q6ZP65 573 aa25.94■■□□□ 1.74
LINC00654-202ENST00000589201 C10orf71Q711Q0 1435 aa25.94■■□□□ 1.74
LINC00654-202ENST00000589201 KRT24Q2M2I5 525 aa25.93■■□□□ 1.74
LINC00654-202ENST00000589201 KIF13BQ9NQT8 1826 aa25.93■■□□□ 1.74
LINC00654-202ENST00000589201 YBX3P16989 372 aaKnown RBP eCLIP25.92■■□□□ 1.74
LINC00654-202ENST00000589201 EIF2S2P20042 333 aaKnown RBP25.92■■□□□ 1.74
LINC00654-202ENST00000589201 TGFB2P61812 414 aa25.92■■□□□ 1.74
LINC00654-202ENST00000589201 NGEFQ8N5V2 710 aa25.92■■□□□ 1.74
LINC00654-202ENST00000589201 A0A0G2JLW4 131 aa25.91■■□□□ 1.74
LINC00654-202ENST00000589201 SERPINB2P05120 415 aa25.91■■□□□ 1.74
LINC00654-202ENST00000589201 ZNF853P0CG23 659 aa25.91■■□□□ 1.74
LINC00654-202ENST00000589201 MYL6BP14649 208 aa25.91■■□□□ 1.74
LINC00654-202ENST00000589201 FAM9BQ8IZU0 186 aa25.91■■□□□ 1.74
LINC00654-202ENST00000589201 WWC3Q9ULE0 1092 aa25.91■■□□□ 1.74
LINC00654-202ENST00000589201 SCN7AQ01118 1682 aa25.9■■□□□ 1.74
LINC00654-202ENST00000589201 CALD1Q05682 793 aaKnown RBP25.9■■□□□ 1.74
LINC00654-202ENST00000589201 MBIPQ9NS73 344 aa25.9■■□□□ 1.74
LINC00654-202ENST00000589201 IFT57Q9NWB7 429 aa25.89■■□□□ 1.74
LINC00654-202ENST00000589201 PXDNLA1KZ92 1463 aa25.89■■□□□ 1.73
LINC00654-202ENST00000589201 AFDNP55196 1824 aaKnown RBP25.88■■□□□ 1.73
LINC00654-202ENST00000589201 DPEP1P16444 411 aa25.88■■□□□ 1.73
LINC00654-202ENST00000589201 GNAI1P63096 354 aa25.88■■□□□ 1.73
LINC00654-202ENST00000589201 CLEC4GQ6UXB4 293 aa25.88■■□□□ 1.73
LINC00654-202ENST00000589201 ERBB4Q15303 1308 aa25.88■■□□□ 1.73
LINC00654-202ENST00000589201 PDIA6Q15084 440 aa25.87■■□□□ 1.73
LINC00654-202ENST00000589201 CCDC27Q2M243 656 aa25.87■■□□□ 1.73
LINC00654-202ENST00000589201 NECTIN2Q92692 538 aa25.87■■□□□ 1.73
LINC00654-202ENST00000589201 SETDB2Q96T68 719 aa25.87■■□□□ 1.73
LINC00654-202ENST00000589201 BCORQ6W2J9 1755 aa25.87■■□□□ 1.73
LINC00654-202ENST00000589201 N4BP2Q86UW6 1770 aaPredicted RBP25.87■■□□□ 1.73
LINC00654-202ENST00000589201 KIAA1551Q9HCM1 1747 aa25.86■■□□□ 1.73
LINC00654-202ENST00000589201 HLFQ16534 295 aa25.86■■□□□ 1.73
LINC00654-202ENST00000589201 TTLL7Q6ZT98 887 aa25.86■■□□□ 1.73
LINC00654-202ENST00000589201 WWC1Q8IX03 1113 aa25.86■■□□□ 1.73
LINC00654-202ENST00000589201 GRIN3BO60391 1043 aa25.85■■□□□ 1.73
LINC00654-202ENST00000589201 ZNF652Q9Y2D9 606 aa25.85■■□□□ 1.73
LINC00654-202ENST00000589201 NRXN2Q9P2S2 1712 aa25.85■■□□□ 1.73
LINC00654-202ENST00000589201 ANXA1P04083 346 aa25.84■■□□□ 1.73
Retrieved 100 of 20,778 RNA–protein pairs in 9.5 ms