RNA–Protein interactions for RNA: ENST00000589161.1

CIRBP-221, Transcript of cold inducible RNA binding protein, humanhuman

TSL 3

Gene CIRBP, Length 769 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-221ENST00000589161 KCNQ3O43525 872 aa25.42■■□□□ 1.66
CIRBP-221ENST00000589161 PELP1Q8IZL8 1130 aaKnown RBP25.42■■□□□ 1.66
CIRBP-221ENST00000589161 SRP68Q9UHB9 627 aaKnown RBP25.42■■□□□ 1.66
CIRBP-221ENST00000589161 CANXP27824 592 aaKnown RBP25.41■■□□□ 1.66
CIRBP-221ENST00000589161 PARP3Q9Y6F1 533 aa25.41■■□□□ 1.66
CIRBP-221ENST00000589161 PNISRQ8TF01 805 aaKnown RBP25.39■■□□□ 1.66
CIRBP-221ENST00000589161 NARFQ9UHQ1 456 aa25.39■■□□□ 1.66
CIRBP-221ENST00000589161 A0A087WZG4 1122 aa25.38■■□□□ 1.65
CIRBP-221ENST00000589161 FKBP8Q14318 412 aa25.38■■□□□ 1.65
CIRBP-221ENST00000589161 WDR43Q15061 677 aaKnown RBP eCLIP25.38■■□□□ 1.65
CIRBP-221ENST00000589161 COL15A1P39059 1388 aa25.38■■□□□ 1.65
CIRBP-221ENST00000589161 SNRPA1P09661 255 aaKnown RBP25.37■■□□□ 1.65
CIRBP-221ENST00000589161 USPL1Q5W0Q7 1092 aa25.37■■□□□ 1.65
CIRBP-221ENST00000589161 ZNF316A6NFI3 1004 aaPredicted RBP25.36■■□□□ 1.65
CIRBP-221ENST00000589161 GRIN3BO60391 1043 aa25.36■■□□□ 1.65
CIRBP-221ENST00000589161 EIF5P55010 431 aaKnown RBP25.36■■□□□ 1.65
CIRBP-221ENST00000589161 C4AP0C0L4 1744 aa25.35■■□□□ 1.65
CIRBP-221ENST00000589161 RIPK4P57078 832 aa25.35■■□□□ 1.65
CIRBP-221ENST00000589161 NPM2Q86SE8 214 aaKnown RBP25.35■■□□□ 1.65
CIRBP-221ENST00000589161 IL6STP40189 918 aaPredicted RBP25.34■■□□□ 1.65
CIRBP-221ENST00000589161 TGFB2P61812 414 aa25.34■■□□□ 1.65
CIRBP-221ENST00000589161 USP16Q9Y5T5 823 aa25.34■■□□□ 1.65
CIRBP-221ENST00000589161 A1BGP04217 495 aa25.33■■□□□ 1.65
CIRBP-221ENST00000589161 YBX3P16989 372 aaKnown RBP eCLIP25.33■■□□□ 1.65
CIRBP-221ENST00000589161 TM4SF1P30408 202 aa25.33■■□□□ 1.65
CIRBP-221ENST00000589161 MIS18AQ9NYP9 233 aa25.33■■□□□ 1.65
CIRBP-221ENST00000589161 TMPOP42166 694 aaKnown RBP25.32■■□□□ 1.64
CIRBP-221ENST00000589161 LMOD3Q0VAK6 560 aa25.32■■□□□ 1.64
CIRBP-221ENST00000589161 RUNDC1Q96C34 613 aa25.31■■□□□ 1.64
CIRBP-221ENST00000589161 THUMPD2Q9BTF0 503 aaKnown RBP25.31■■□□□ 1.64
CIRBP-221ENST00000589161 ADAMTS8Q9UP79 889 aa25.31■■□□□ 1.64
CIRBP-221ENST00000589161 DDR1Q08345 913 aa25.3■■□□□ 1.64
CIRBP-221ENST00000589161 ZNF330Q9Y3S2 320 aaPredicted RBP25.3■■□□□ 1.64
CIRBP-221ENST00000589161 PRAMEF22A3QJZ6 481 aa25.29■■□□□ 1.64
CIRBP-221ENST00000589161 POLRMTO00411 1230 aaKnown RBP25.29■■□□□ 1.64
CIRBP-221ENST00000589161 CCDC146Q8IYE0 955 aa25.29■■□□□ 1.64
CIRBP-221ENST00000589161 BCL2L12Q9HB09 334 aa25.29■■□□□ 1.64
CIRBP-221ENST00000589161 C10orf71Q711Q0 1435 aa25.29■■□□□ 1.64
CIRBP-221ENST00000589161 DLG5Q8TDM6 1919 aa25.28■■□□□ 1.64
CIRBP-221ENST00000589161 NFIXQ14938 502 aa25.28■■□□□ 1.64
CIRBP-221ENST00000589161 TBC1D2BQ9UPU7 963 aa25.27■■□□□ 1.64
CIRBP-221ENST00000589161 EIF4A1P60842 406 aaKnown RBP25.26■■□□□ 1.63
CIRBP-221ENST00000589161 BABAM1Q9NWV8 329 aa25.26■■□□□ 1.63
CIRBP-221ENST00000589161 UTRNP46939 3433 aa25.25■■□□□ 1.63
CIRBP-221ENST00000589161 A0A0G2JLW4 131 aa25.25■■□□□ 1.63
CIRBP-221ENST00000589161 RRP7AQ9Y3A4 280 aaKnown RBP25.25■■□□□ 1.63
CIRBP-221ENST00000589161 PXDNLA1KZ92 1463 aa25.24■■□□□ 1.63
CIRBP-221ENST00000589161 GIGYF1O75420 1035 aaPredicted RBP25.24■■□□□ 1.63
CIRBP-221ENST00000589161 NEUROD2Q15784 382 aa25.24■■□□□ 1.63
CIRBP-221ENST00000589161 TSPYL4Q9UJ04 414 aa25.24■■□□□ 1.63
CIRBP-221ENST00000589161 DPEP1P16444 411 aa25.23■■□□□ 1.63
CIRBP-221ENST00000589161 DZIP3Q86Y13 1208 aaKnown RBP25.23■■□□□ 1.63
CIRBP-221ENST00000589161 WWC3Q9ULE0 1092 aa25.23■■□□□ 1.63
CIRBP-221ENST00000589161 KIF13BQ9NQT8 1826 aa25.23■■□□□ 1.63
CIRBP-221ENST00000589161 SERPINB2P05120 415 aa25.22■■□□□ 1.63
CIRBP-221ENST00000589161 PIP4K2AP48426 406 aaPredicted RBP25.22■■□□□ 1.63
CIRBP-221ENST00000589161 CAMTA2O94983 1202 aa25.21■■□□□ 1.63
CIRBP-221ENST00000589161 BICDL1Q6ZP65 573 aa25.21■■□□□ 1.63
CIRBP-221ENST00000589161 NBPF26B4DH59 902 aa25.2■■□□□ 1.62
CIRBP-221ENST00000589161 TBC1D9BQ66K14 1250 aa25.2■■□□□ 1.62
CIRBP-221ENST00000589161 NBPF10Q6P3W6 841 aaKnown RBP25.2■■□□□ 1.62
CIRBP-221ENST00000589161 NBPF15Q8N660 670 aa25.2■■□□□ 1.62
CIRBP-221ENST00000589161 CHD4Q14839 1912 aa25.2■■□□□ 1.62
CIRBP-221ENST00000589161 TRIM35Q9UPQ4 493 aa25.19■■□□□ 1.62
CIRBP-221ENST00000589161 GOLGB1Q14789 3259 aaKnown RBP25.19■■□□□ 1.62
CIRBP-221ENST00000589161 ANP32CO43423 234 aa25.18■■□□□ 1.62
CIRBP-221ENST00000589161 KCNA3P22001 575 aa25.18■■□□□ 1.62
CIRBP-221ENST00000589161 CLEC4GQ6UXB4 293 aa25.18■■□□□ 1.62
CIRBP-221ENST00000589161 PIM2Q9P1W9 311 aa25.18■■□□□ 1.62
CIRBP-221ENST00000589161 BCS1LQ9Y276 419 aa25.18■■□□□ 1.62
CIRBP-221ENST00000589161 KDM3BQ7LBC6 1761 aa25.18■■□□□ 1.62
CIRBP-221ENST00000589161 ZNF784Q8NCA9 323 aaPredicted RBP25.17■■□□□ 1.62
CIRBP-221ENST00000589161 SETDB2Q96T68 719 aa25.17■■□□□ 1.62
CIRBP-221ENST00000589161 ZNF652Q9Y2D9 606 aa25.17■■□□□ 1.62
CIRBP-221ENST00000589161 RGL2O15211 777 aa25.16■■□□□ 1.62
CIRBP-221ENST00000589161 CARMIL3Q8ND23 1372 aa25.15■■□□□ 1.62
CIRBP-221ENST00000589161 CHL1O00533 1208 aa25.14■■□□□ 1.62
CIRBP-221ENST00000589161 CHRNA5P30532 468 aa25.14■■□□□ 1.62
CIRBP-221ENST00000589161 KIAA1551Q9HCM1 1747 aa25.14■■□□□ 1.61
CIRBP-221ENST00000589161 N4BP2Q86UW6 1770 aaPredicted RBP25.13■■□□□ 1.61
CIRBP-221ENST00000589161 APAF1O14727 1248 aa25.13■■□□□ 1.61
CIRBP-221ENST00000589161 DALRD3Q5D0E6 543 aaKnown RBP25.13■■□□□ 1.61
CIRBP-221ENST00000589161 LAS1LQ9Y4W2 734 aaKnown RBP25.13■■□□□ 1.61
CIRBP-221ENST00000589161 ERBB4Q15303 1308 aa25.12■■□□□ 1.61
CIRBP-221ENST00000589161 SCN7AQ01118 1682 aa25.12■■□□□ 1.61
CIRBP-221ENST00000589161 CCDC184Q52MB2 194 aa25.11■■□□□ 1.61
CIRBP-221ENST00000589161 NRXN2Q9P2S2 1712 aa25.11■■□□□ 1.61
CIRBP-221ENST00000589161 NPHP1O15259 732 aa25.1■■□□□ 1.61
CIRBP-221ENST00000589161 PRR5LQ6MZQ0 368 aa25.1■■□□□ 1.61
CIRBP-221ENST00000589161 NGEFQ8N5V2 710 aa25.1■■□□□ 1.61
CIRBP-221ENST00000589161 BRIP1Q9BX63 1249 aa25.1■■□□□ 1.61
CIRBP-221ENST00000589161 PDZRN3Q9UPQ7 1066 aa25.1■■□□□ 1.61
CIRBP-221ENST00000589161 LAMB4A4D0S4 1761 aa25.09■■□□□ 1.61
CIRBP-221ENST00000589161 ERVV-1B6SEH8 477 aa25.09■■□□□ 1.61
CIRBP-221ENST00000589161 H0YIN7 160 aa25.09■■□□□ 1.61
CIRBP-221ENST00000589161 MYL6BP14649 208 aa25.09■■□□□ 1.61
CIRBP-221ENST00000589161 EIF2S2P20042 333 aaKnown RBP25.09■■□□□ 1.61
CIRBP-221ENST00000589161 ARHGAP27Q6ZUM4 889 aa25.09■■□□□ 1.61
CIRBP-221ENST00000589161 CNBD1Q8NA66 436 aa25.09■■□□□ 1.61
CIRBP-221ENST00000589161 AFDNP55196 1824 aaKnown RBP25.09■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms