RNA–Protein interactions for RNA: ENST00000589064.5

MBD3-205, Transcript of methyl-CpG binding domain protein 3, humanhuman

TSL 2

Gene MBD3, Length 1,475 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3-205ENST00000589064 TAF7Q15545 349 aaPredicted RBP27.46■■□□□ 1.99
MBD3-205ENST00000589064 USPL1Q5W0Q7 1092 aa27.46■■□□□ 1.99
MBD3-205ENST00000589064 MAPK8IP3Q9UPT6 1336 aa27.46■■□□□ 1.99
MBD3-205ENST00000589064 PRKRIP1Q9H875 184 aaPredicted RBP27.44■■□□□ 1.98
MBD3-205ENST00000589064 MIS18AQ9NYP9 233 aa27.44■■□□□ 1.98
MBD3-205ENST00000589064 NARFQ9UHQ1 456 aa27.44■■□□□ 1.98
MBD3-205ENST00000589064 CICQ96RK0 1608 aaPredicted RBP27.43■■□□□ 1.98
MBD3-205ENST00000589064 A1BGP04217 495 aa27.43■■□□□ 1.98
MBD3-205ENST00000589064 WWC3Q9ULE0 1092 aa27.43■■□□□ 1.98
MBD3-205ENST00000589064 USP16Q9Y5T5 823 aa27.43■■□□□ 1.98
MBD3-205ENST00000589064 COL15A1P39059 1388 aa27.42■■□□□ 1.98
MBD3-205ENST00000589064 EIF5P55010 431 aaKnown RBP27.42■■□□□ 1.98
MBD3-205ENST00000589064 THUMPD2Q9BTF0 503 aaKnown RBP27.42■■□□□ 1.98
MBD3-205ENST00000589064 VIRMAQ69YN4 1812 aaKnown RBP27.42■■□□□ 1.98
MBD3-205ENST00000589064 PRAMEF22A3QJZ6 481 aa27.41■■□□□ 1.98
MBD3-205ENST00000589064 TM4SF1P30408 202 aa27.41■■□□□ 1.98
MBD3-205ENST00000589064 GRIN3BO60391 1043 aa27.4■■□□□ 1.98
MBD3-205ENST00000589064 DDR1Q08345 913 aa27.4■■□□□ 1.98
MBD3-205ENST00000589064 ZNF330Q9Y3S2 320 aaPredicted RBP27.4■■□□□ 1.98
MBD3-205ENST00000589064 SNRPA1P09661 255 aaKnown RBP27.39■■□□□ 1.98
MBD3-205ENST00000589064 BCL2L12Q9HB09 334 aa27.39■■□□□ 1.98
MBD3-205ENST00000589064 A0A087WZG4 1122 aa27.38■■□□□ 1.97
MBD3-205ENST00000589064 UBR2Q8IWV8 1755 aa27.38■■□□□ 1.97
MBD3-205ENST00000589064 RIPK4P57078 832 aa27.38■■□□□ 1.97
MBD3-205ENST00000589064 TGFB2P61812 414 aa27.38■■□□□ 1.97
MBD3-205ENST00000589064 SIPA1L3O60292 1781 aaPredicted RBP27.37■■□□□ 1.97
MBD3-205ENST00000589064 A0A0G2JLW4 131 aa27.37■■□□□ 1.97
MBD3-205ENST00000589064 WDR43Q15061 677 aaKnown RBP eCLIP27.37■■□□□ 1.97
MBD3-205ENST00000589064 CCDC146Q8IYE0 955 aa27.37■■□□□ 1.97
MBD3-205ENST00000589064 POLRMTO00411 1230 aaKnown RBP27.36■■□□□ 1.97
MBD3-205ENST00000589064 IL6STP40189 918 aaPredicted RBP27.36■■□□□ 1.97
MBD3-205ENST00000589064 NFIXQ14938 502 aa27.36■■□□□ 1.97
MBD3-205ENST00000589064 PNISRQ8TF01 805 aaKnown RBP27.36■■□□□ 1.97
MBD3-205ENST00000589064 TBC1D2BQ9UPU7 963 aa27.36■■□□□ 1.97
MBD3-205ENST00000589064 TMPOP42166 694 aaKnown RBP27.35■■□□□ 1.97
MBD3-205ENST00000589064 PIP4K2AP48426 406 aaPredicted RBP27.35■■□□□ 1.97
MBD3-205ENST00000589064 ADAMTS8Q9UP79 889 aa27.35■■□□□ 1.97
MBD3-205ENST00000589064 C4AP0C0L4 1744 aa27.34■■□□□ 1.97
MBD3-205ENST00000589064 ZNF316A6NFI3 1004 aaPredicted RBP27.33■■□□□ 1.97
MBD3-205ENST00000589064 DPEP1P16444 411 aa27.33■■□□□ 1.97
MBD3-205ENST00000589064 NPM2Q86SE8 214 aaKnown RBP27.33■■□□□ 1.97
MBD3-205ENST00000589064 RRP7AQ9Y3A4 280 aaKnown RBP27.33■■□□□ 1.97
MBD3-205ENST00000589064 C10orf71Q711Q0 1435 aa27.32■■□□□ 1.96
MBD3-205ENST00000589064 BICDL1Q6ZP65 573 aa27.32■■□□□ 1.96
MBD3-205ENST00000589064 UTRNP46939 3433 aa27.31■■□□□ 1.96
MBD3-205ENST00000589064 NEUROD2Q15784 382 aa27.31■■□□□ 1.96
MBD3-205ENST00000589064 RUNDC1Q96C34 613 aa27.31■■□□□ 1.96
MBD3-205ENST00000589064 EIF4A1P60842 406 aaKnown RBP27.3■■□□□ 1.96
MBD3-205ENST00000589064 PXDNLA1KZ92 1463 aa27.3■■□□□ 1.96
MBD3-205ENST00000589064 SERPINB2P05120 415 aa27.29■■□□□ 1.96
MBD3-205ENST00000589064 ZNF784Q8NCA9 323 aaPredicted RBP27.29■■□□□ 1.96
MBD3-205ENST00000589064 NBPF26B4DH59 902 aa27.28■■□□□ 1.96
MBD3-205ENST00000589064 TBC1D9BQ66K14 1250 aa27.28■■□□□ 1.96
MBD3-205ENST00000589064 NBPF10Q6P3W6 841 aaKnown RBP27.28■■□□□ 1.96
MBD3-205ENST00000589064 DZIP3Q86Y13 1208 aaKnown RBP27.28■■□□□ 1.96
MBD3-205ENST00000589064 NBPF15Q8N660 670 aa27.28■■□□□ 1.96
MBD3-205ENST00000589064 GIGYF1O75420 1035 aaPredicted RBP27.27■■□□□ 1.96
MBD3-205ENST00000589064 KCNA3P22001 575 aa27.27■■□□□ 1.96
MBD3-205ENST00000589064 BCS1LQ9Y276 419 aa27.27■■□□□ 1.96
MBD3-205ENST00000589064 CAMTA2O94983 1202 aa27.26■■□□□ 1.95
MBD3-205ENST00000589064 LMOD3Q0VAK6 560 aa27.26■■□□□ 1.95
MBD3-205ENST00000589064 TSPYL4Q9UJ04 414 aa27.25■■□□□ 1.95
MBD3-205ENST00000589064 CHRNA5P30532 468 aa27.24■■□□□ 1.95
MBD3-205ENST00000589064 GOLGB1Q14789 3259 aaKnown RBP27.24■■□□□ 1.95
MBD3-205ENST00000589064 PIM2Q9P1W9 311 aa27.23■■□□□ 1.95
MBD3-205ENST00000589064 TRIM35Q9UPQ4 493 aa27.22■■□□□ 1.95
MBD3-205ENST00000589064 DLG5Q8TDM6 1919 aa27.21■■□□□ 1.95
MBD3-205ENST00000589064 CCDC184Q52MB2 194 aa27.2■■□□□ 1.95
MBD3-205ENST00000589064 SETDB2Q96T68 719 aa27.2■■□□□ 1.95
MBD3-205ENST00000589064 NGEFQ8N5V2 710 aa27.19■■□□□ 1.94
MBD3-205ENST00000589064 BABAM1Q9NWV8 329 aa27.19■■□□□ 1.94
MBD3-205ENST00000589064 KIF13BQ9NQT8 1826 aa27.18■■□□□ 1.94
MBD3-205ENST00000589064 DALRD3Q5D0E6 543 aaKnown RBP27.18■■□□□ 1.94
MBD3-205ENST00000589064 ARHGAP27Q6ZUM4 889 aa27.18■■□□□ 1.94
MBD3-205ENST00000589064 CCDC24Q8N4L8 307 aa27.18■■□□□ 1.94
MBD3-205ENST00000589064 CLEC4GQ6UXB4 293 aa27.17■■□□□ 1.94
MBD3-205ENST00000589064 LAS1LQ9Y4W2 734 aaKnown RBP27.17■■□□□ 1.94
MBD3-205ENST00000589064 CHL1O00533 1208 aa27.15■■□□□ 1.94
MBD3-205ENST00000589064 APAF1O14727 1248 aa27.15■■□□□ 1.94
MBD3-205ENST00000589064 MYL6BP14649 208 aa27.15■■□□□ 1.94
MBD3-205ENST00000589064 PRR5LQ6MZQ0 368 aa27.15■■□□□ 1.94
MBD3-205ENST00000589064 N4BP2Q86UW6 1770 aaPredicted RBP27.15■■□□□ 1.94
MBD3-205ENST00000589064 CHD4Q14839 1912 aa27.14■■□□□ 1.94
MBD3-205ENST00000589064 C2CD5Q86YS7 1000 aa27.14■■□□□ 1.94
MBD3-205ENST00000589064 ZNF652Q9Y2D9 606 aa27.14■■□□□ 1.94
MBD3-205ENST00000589064 KIAA1551Q9HCM1 1747 aa27.14■■□□□ 1.94
MBD3-205ENST00000589064 CARMIL3Q8ND23 1372 aa27.14■■□□□ 1.94
MBD3-205ENST00000589064 EIF2S2P20042 333 aaKnown RBP27.13■■□□□ 1.93
MBD3-205ENST00000589064 HLFQ16534 295 aa27.13■■□□□ 1.93
MBD3-205ENST00000589064 NPHP1O15259 732 aa27.13■■□□□ 1.93
MBD3-205ENST00000589064 ANP32CO43423 234 aa27.13■■□□□ 1.93
MBD3-205ENST00000589064 H0YIN7 160 aa27.12■■□□□ 1.93
MBD3-205ENST00000589064 BRIP1Q9BX63 1249 aa27.12■■□□□ 1.93
MBD3-205ENST00000589064 KDM3BQ7LBC6 1761 aa27.11■■□□□ 1.93
MBD3-205ENST00000589064 TTLL7Q6ZT98 887 aa27.11■■□□□ 1.93
MBD3-205ENST00000589064 CNBD1Q8NA66 436 aa27.11■■□□□ 1.93
MBD3-205ENST00000589064 NIP7Q9Y221 180 aaKnown RBP eCLIP27.11■■□□□ 1.93
MBD3-205ENST00000589064 RGL2O15211 777 aa27.09■■□□□ 1.93
MBD3-205ENST00000589064 PDE6BP35913 854 aa27.09■■□□□ 1.93
MBD3-205ENST00000589064 KRT24Q2M2I5 525 aa27.09■■□□□ 1.93
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms