RNA–Protein interactions for RNA: ENST00000588907.2

SCAMP4-211, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 4

Gene SCAMP4, Length 547 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-211ENST00000588907 RCAN3Q9UKA8 241 aa21.76■■□□□ 1.07
SCAMP4-211ENST00000588907 CNTNAP4Q9C0A0 1308 aa21.76■■□□□ 1.07
SCAMP4-211ENST00000588907 CYP19A1P11511 503 aaPredicted RBP21.75■■□□□ 1.07
SCAMP4-211ENST00000588907 RC3H1Q5TC82 1133 aaKnown RBP21.75■■□□□ 1.07
SCAMP4-211ENST00000588907 USP16Q9Y5T5 823 aa21.75■■□□□ 1.07
SCAMP4-211ENST00000588907 RREB1Q92766 1687 aa21.75■■□□□ 1.07
SCAMP4-211ENST00000588907 PRAMEF22A3QJZ6 481 aa21.74■■□□□ 1.07
SCAMP4-211ENST00000588907 RARSP54136 660 aaKnown RBP21.74■■□□□ 1.07
SCAMP4-211ENST00000588907 BRPF1P55201 1214 aaPredicted RBP21.74■■□□□ 1.07
SCAMP4-211ENST00000588907 ITPK1Q13572 414 aa21.74■■□□□ 1.07
SCAMP4-211ENST00000588907 CAMKK2Q96RR4 588 aa21.74■■□□□ 1.07
SCAMP4-211ENST00000588907 DDX21Q9NR30 783 aaKnown RBP eCLIP21.73■■□□□ 1.07
SCAMP4-211ENST00000588907 SMC4Q9NTJ3 1288 aa21.73■■□□□ 1.07
SCAMP4-211ENST00000588907 CCDC87Q9NVE4 849 aa21.73■■□□□ 1.07
SCAMP4-211ENST00000588907 HYPKQ9NX55 129 aa21.73■■□□□ 1.07
SCAMP4-211ENST00000588907 KIF16BQ96L93 1317 aa21.73■■□□□ 1.07
SCAMP4-211ENST00000588907 C4BP0C0L5 1744 aa21.72■■□□□ 1.07
SCAMP4-211ENST00000588907 NPM2Q86SE8 214 aaKnown RBP21.72■■□□□ 1.07
SCAMP4-211ENST00000588907 LINC00116Q8NCU8 138 aa21.72■■□□□ 1.07
SCAMP4-211ENST00000588907 UPF1Q92900 1129 aaKnown RBP eCLIP21.72■■□□□ 1.07
SCAMP4-211ENST00000588907 CRKLP46109 303 aaKnown RBP21.71■■□□□ 1.07
SCAMP4-211ENST00000588907 EN1Q05925 392 aaPredicted RBP21.71■■□□□ 1.07
SCAMP4-211ENST00000588907 SSH1Q8WYL5 1049 aa21.71■■□□□ 1.07
SCAMP4-211ENST00000588907 CHPF2Q9P2E5 772 aa21.71■■□□□ 1.07
SCAMP4-211ENST00000588907 IL6STP40189 918 aaPredicted RBP21.7■■□□□ 1.06
SCAMP4-211ENST00000588907 PROM2Q8N271 834 aa21.7■■□□□ 1.06
SCAMP4-211ENST00000588907 LRRC4BQ9NT99 713 aa21.7■■□□□ 1.06
SCAMP4-211ENST00000588907 SLC4A2P04920 1241 aa21.69■■□□□ 1.06
SCAMP4-211ENST00000588907 ILDR2Q71H61 639 aa21.69■■□□□ 1.06
SCAMP4-211ENST00000588907 NECTIN2Q92692 538 aa21.69■■□□□ 1.06
SCAMP4-211ENST00000588907 AK7Q96M32 723 aa21.69■■□□□ 1.06
SCAMP4-211ENST00000588907 EZH2Q15910 746 aaKnown RBP21.68■■□□□ 1.06
SCAMP4-211ENST00000588907 GOLGA6L2Q8N9W4 650 aaPredicted RBP21.68■■□□□ 1.06
SCAMP4-211ENST00000588907 PTPRCP08575 1304 aa21.68■■□□□ 1.06
SCAMP4-211ENST00000588907 IPO8O15397 1037 aaKnown RBP21.67■■□□□ 1.06
SCAMP4-211ENST00000588907 A1BGP04217 495 aa21.67■■□□□ 1.06
SCAMP4-211ENST00000588907 PDIA6Q15084 440 aa21.67■■□□□ 1.06
SCAMP4-211ENST00000588907 INTS5Q6P9B9 1019 aaKnown RBP21.67■■□□□ 1.06
SCAMP4-211ENST00000588907 MRPL50Q8N5N7 158 aaKnown RBP21.67■■□□□ 1.06
SCAMP4-211ENST00000588907 ZBTB1Q9Y2K1 713 aa21.67■■□□□ 1.06
SCAMP4-211ENST00000588907 MYH14Q7Z406 1995 aaKnown RBP21.67■■□□□ 1.06
SCAMP4-211ENST00000588907 A0A087WZG4 1122 aa21.66■■□□□ 1.06
SCAMP4-211ENST00000588907 DDX58O95786 925 aaKnown RBP21.66■■□□□ 1.06
SCAMP4-211ENST00000588907 ADRA2BP18089 450 aa21.66■■□□□ 1.06
SCAMP4-211ENST00000588907 DEFB132Q7Z7B7 95 aa21.66■■□□□ 1.06
SCAMP4-211ENST00000588907 RTCBQ9Y3I0 505 aaKnown RBP21.66■■□□□ 1.06
SCAMP4-211ENST00000588907 NUP188Q5SRE5 1749 aa21.66■■□□□ 1.06
SCAMP4-211ENST00000588907 NBPF26B4DH59 902 aa21.65■■□□□ 1.06
SCAMP4-211ENST00000588907 RPS6KA4O75676 772 aa21.65■■□□□ 1.06
SCAMP4-211ENST00000588907 CANXP27824 592 aaKnown RBP21.65■■□□□ 1.06
SCAMP4-211ENST00000588907 KCNQ4P56696 695 aa21.65■■□□□ 1.06
SCAMP4-211ENST00000588907 NBPF14Q5TI25 921 aa21.65■■□□□ 1.06
SCAMP4-211ENST00000588907 NBPF10Q6P3W6 841 aaKnown RBP21.65■■□□□ 1.06
SCAMP4-211ENST00000588907 NBPF15Q8N660 670 aa21.65■■□□□ 1.06
SCAMP4-211ENST00000588907 ARHGAP45Q92619 1136 aa21.65■■□□□ 1.06
SCAMP4-211ENST00000588907 GNPATO15228 680 aa21.64■■□□□ 1.05
SCAMP4-211ENST00000588907 MYL6BP14649 208 aa21.64■■□□□ 1.05
SCAMP4-211ENST00000588907 EIF5P55010 431 aaKnown RBP21.64■■□□□ 1.05
SCAMP4-211ENST00000588907 FLIIQ13045 1269 aa21.64■■□□□ 1.05
SCAMP4-211ENST00000588907 BCL2L13Q9BXK5 485 aa21.64■■□□□ 1.05
SCAMP4-211ENST00000588907 COL15A1P39059 1388 aa21.63■■□□□ 1.05
SCAMP4-211ENST00000588907 RGL2O15211 777 aa21.63■■□□□ 1.05
SCAMP4-211ENST00000588907 SSFA2P28290 1259 aa21.63■■□□□ 1.05
SCAMP4-211ENST00000588907 PROSER3Q2NL68 480 aa21.63■■□□□ 1.05
SCAMP4-211ENST00000588907 KIF6Q6ZMV9 814 aa21.63■■□□□ 1.05
SCAMP4-211ENST00000588907 LRP10Q7Z4F1 713 aa21.63■■□□□ 1.05
SCAMP4-211ENST00000588907 FLAD1Q8NFF5 587 aa21.63■■□□□ 1.05
SCAMP4-211ENST00000588907 UBR3Q6ZT12 1888 aa21.62■■□□□ 1.05
SCAMP4-211ENST00000588907 TCERG1O14776 1098 aaKnown RBP21.62■■□□□ 1.05
SCAMP4-211ENST00000588907 BCAR3O75815 825 aa21.62■■□□□ 1.05
SCAMP4-211ENST00000588907 MS4A1P11836 297 aa21.62■■□□□ 1.05
SCAMP4-211ENST00000588907 STK32BQ9NY57 414 aa21.62■■□□□ 1.05
SCAMP4-211ENST00000588907 ZKSCAN2Q63HK3 967 aa21.61■■□□□ 1.05
SCAMP4-211ENST00000588907 AKT1S1Q96B36 256 aa21.61■■□□□ 1.05
SCAMP4-211ENST00000588907 API5Q9BZZ5 524 aaKnown RBP21.61■■□□□ 1.05
SCAMP4-211ENST00000588907 QSER1Q2KHR3 1735 aa21.6■■□□□ 1.05
SCAMP4-211ENST00000588907 ANXA1P04083 346 aa21.6■■□□□ 1.05
SCAMP4-211ENST00000588907 FKBP5Q13451 457 aaPredicted RBP21.6■■□□□ 1.05
SCAMP4-211ENST00000588907 COPS6Q7L5N1 327 aa21.6■■□□□ 1.05
SCAMP4-211ENST00000588907 XAGE3Q8WTP9 111 aa21.6■■□□□ 1.05
SCAMP4-211ENST00000588907 TFCP2L1Q9NZI6 479 aa21.6■■□□□ 1.05
SCAMP4-211ENST00000588907 ZNF330Q9Y3S2 320 aaPredicted RBP21.6■■□□□ 1.05
SCAMP4-211ENST00000588907 TRAPPC3LQ5T215 181 aa21.59■■□□□ 1.05
SCAMP4-211ENST00000588907 NOB1Q9ULX3 412 aaKnown RBP21.59■■□□□ 1.05
SCAMP4-211ENST00000588907 ERVV-1B6SEH8 477 aa21.58■■□□□ 1.05
SCAMP4-211ENST00000588907 PIP4K2AP48426 406 aaPredicted RBP21.58■■□□□ 1.05
SCAMP4-211ENST00000588907 ATF7IPQ6VMQ6 1270 aa21.58■■□□□ 1.05
SCAMP4-211ENST00000588907 PLBD2Q8NHP8 589 aa21.58■■□□□ 1.05
SCAMP4-211ENST00000588907 FRAT1Q92837 279 aaPredicted RBP21.58■■□□□ 1.05
SCAMP4-211ENST00000588907 PHAXQ9H814 394 aaKnown RBP21.58■■□□□ 1.05
SCAMP4-211ENST00000588907 PXDNLA1KZ92 1463 aa21.58■■□□□ 1.04
SCAMP4-211ENST00000588907 RRP1P56182 461 aaKnown RBP21.57■■□□□ 1.04
SCAMP4-211ENST00000588907 SLC15A2Q16348 729 aa21.57■■□□□ 1.04
SCAMP4-211ENST00000588907 KSR2Q6VAB6 950 aa21.57■■□□□ 1.04
SCAMP4-211ENST00000588907 ANKRD13DQ6ZTN6 518 aa21.57■■□□□ 1.04
SCAMP4-211ENST00000588907 G2E3Q7L622 706 aa21.57■■□□□ 1.04
SCAMP4-211ENST00000588907 DZIP3Q86Y13 1208 aaKnown RBP21.57■■□□□ 1.04
SCAMP4-211ENST00000588907 ZNF652Q9Y2D9 606 aa21.57■■□□□ 1.04
SCAMP4-211ENST00000588907 RNF123Q5XPI4 1314 aa21.56■■□□□ 1.04
SCAMP4-211ENST00000588907 MAP3K15Q6ZN16 1313 aa21.56■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms