RNA–Protein interactions for RNA: ENST00000588885.1

RFX1-204, Transcript of regulatory factor X1, humanhuman

TSL 3

Gene RFX1, Length 886 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX1-204ENST00000588885 CANXP27824 592 aaKnown RBP15.35■□□□□ 0.05
RFX1-204ENST00000588885 ZNF790Q6PG37 636 aa15.35■□□□□ 0.05
RFX1-204ENST00000588885 FKBP8Q14318 412 aa15.34■□□□□ 0.05
RFX1-204ENST00000588885 RALBP1Q15311 655 aa15.34■□□□□ 0.05
RFX1-204ENST00000588885 ZBTB1Q9Y2K1 713 aa15.34■□□□□ 0.05
RFX1-204ENST00000588885 SCN11AQ9UI33 1791 aa15.34■□□□□ 0.05
RFX1-204ENST00000588885 MRC1P22897 1456 aa15.33■□□□□ 0.05
RFX1-204ENST00000588885 VSIG10Q8N0Z9 540 aa15.33■□□□□ 0.04
RFX1-204ENST00000588885 PARP3Q9Y6F1 533 aa15.33■□□□□ 0.04
RFX1-204ENST00000588885 COL5A3P25940 1745 aaPredicted RBP15.32■□□□□ 0.04
RFX1-204ENST00000588885 ZPR1O75312 459 aa15.32■□□□□ 0.04
RFX1-204ENST00000588885 STARD3NLO95772 234 aa15.32■□□□□ 0.04
RFX1-204ENST00000588885 NEFMP07197 916 aa15.32■□□□□ 0.04
RFX1-204ENST00000588885 USPL1Q5W0Q7 1092 aa15.32■□□□□ 0.04
RFX1-204ENST00000588885 SP7Q8TDD2 431 aaPredicted RBP15.32■□□□□ 0.04
RFX1-204ENST00000588885 MIS18AQ9NYP9 233 aa15.32■□□□□ 0.04
RFX1-204ENST00000588885 ZNF330Q9Y3S2 320 aaPredicted RBP15.32■□□□□ 0.04
RFX1-204ENST00000588885 SOS1Q07889 1333 aaPredicted RBP15.32■□□□□ 0.04
RFX1-204ENST00000588885 CEMIPQ8WUJ3 1361 aa15.32■□□□□ 0.04
RFX1-204ENST00000588885 FMNL2Q96PY5 1086 aa15.31■□□□□ 0.04
RFX1-204ENST00000588885 USP42Q9H9J4 1324 aaKnown RBP15.31■□□□□ 0.04
RFX1-204ENST00000588885 KCPQ6ZWJ8 1503 aa15.31■□□□□ 0.04
RFX1-204ENST00000588885 A0A0G2JLW4 131 aa15.3■□□□□ 0.04
RFX1-204ENST00000588885 GIGYF1O75420 1035 aaPredicted RBP15.3■□□□□ 0.04
RFX1-204ENST00000588885 A1BGP04217 495 aa15.3■□□□□ 0.04
RFX1-204ENST00000588885 ZNF831Q5JPB2 1677 aa15.3■□□□□ 0.04
RFX1-204ENST00000588885 PLEKHF1Q96S99 279 aa15.3■□□□□ 0.04
RFX1-204ENST00000588885 HEG1Q9ULI3 1381 aa15.3■□□□□ 0.04
RFX1-204ENST00000588885 MYH14Q7Z406 1995 aaKnown RBP15.29■□□□□ 0.04
RFX1-204ENST00000588885 N4BP2Q86UW6 1770 aaPredicted RBP15.29■□□□□ 0.04
RFX1-204ENST00000588885 PRAMEF22A3QJZ6 481 aa15.29■□□□□ 0.04
RFX1-204ENST00000588885 HTATSF1O43719 755 aaKnown RBP15.29■□□□□ 0.04
RFX1-204ENST00000588885 DDR1Q08345 913 aa15.29■□□□□ 0.04
RFX1-204ENST00000588885 THUMPD2Q9BTF0 503 aaKnown RBP15.29■□□□□ 0.04
RFX1-204ENST00000588885 C4AP0C0L4 1744 aa15.29■□□□□ 0.04
RFX1-204ENST00000588885 MYBBP1AQ9BQG0 1328 aaKnown RBP15.28■□□□□ 0.04
RFX1-204ENST00000588885 MAPK8IP3Q9UPT6 1336 aa15.28■□□□□ 0.04
RFX1-204ENST00000588885 SENP3-EIF4A1A0A087X0R7 540 aa15.28■□□□□ 0.04
RFX1-204ENST00000588885 PIP4K2AP48426 406 aaPredicted RBP15.28■□□□□ 0.04
RFX1-204ENST00000588885 NFE2L2Q16236 605 aa15.28■□□□□ 0.04
RFX1-204ENST00000588885 TEX13AQ9BXU3 409 aaPredicted RBP15.28■□□□□ 0.04
RFX1-204ENST00000588885 NARFQ9UHQ1 456 aa15.28■□□□□ 0.04
RFX1-204ENST00000588885 USP16Q9Y5T5 823 aa15.28■□□□□ 0.04
RFX1-204ENST00000588885 COL15A1P39059 1388 aa15.27■□□□□ 0.04
RFX1-204ENST00000588885 TJP1Q07157 1748 aa15.27■□□□□ 0.04
RFX1-204ENST00000588885 DPEP1P16444 411 aa15.27■□□□□ 0.04
RFX1-204ENST00000588885 TM4SF1P30408 202 aa15.27■□□□□ 0.04
RFX1-204ENST00000588885 EIF5P55010 431 aaKnown RBP15.27■□□□□ 0.04
RFX1-204ENST00000588885 TAF7Q15545 349 aaPredicted RBP15.27■□□□□ 0.04
RFX1-204ENST00000588885 BICDL1Q6ZP65 573 aa15.27■□□□□ 0.04
RFX1-204ENST00000588885 PNNQ9H307 717 aaKnown RBP15.27■□□□□ 0.04
RFX1-204ENST00000588885 TBC1D2BQ9UPU7 963 aa15.27■□□□□ 0.04
RFX1-204ENST00000588885 ADAMTS7Q9UKP4 1686 aa15.27■□□□□ 0.03
RFX1-204ENST00000588885 NFIXQ14938 502 aa15.26■□□□□ 0.03
RFX1-204ENST00000588885 CCDC146Q8IYE0 955 aa15.26■□□□□ 0.03
RFX1-204ENST00000588885 BCL2L12Q9HB09 334 aa15.26■□□□□ 0.03
RFX1-204ENST00000588885 KIF13BQ9NQT8 1826 aa15.26■□□□□ 0.03
RFX1-204ENST00000588885 CICQ96RK0 1608 aaPredicted RBP15.25■□□□□ 0.03
RFX1-204ENST00000588885 A0A087WZG4 1122 aa15.25■□□□□ 0.03
RFX1-204ENST00000588885 POLRMTO00411 1230 aaKnown RBP15.25■□□□□ 0.03
RFX1-204ENST00000588885 SNRPA1P09661 255 aaKnown RBP15.25■□□□□ 0.03
RFX1-204ENST00000588885 RRP7AQ9Y3A4 280 aaKnown RBP15.25■□□□□ 0.03
RFX1-204ENST00000588885 RIPK4P57078 832 aa15.24■□□□□ 0.03
RFX1-204ENST00000588885 C1QTNF8P60827 252 aa15.24■□□□□ 0.03
RFX1-204ENST00000588885 TGFB2P61812 414 aa15.24■□□□□ 0.03
RFX1-204ENST00000588885 NEUROD2Q15784 382 aa15.24■□□□□ 0.03
RFX1-204ENST00000588885 NPM2Q86SE8 214 aaKnown RBP15.24■□□□□ 0.03
RFX1-204ENST00000588885 BCS1LQ9Y276 419 aa15.24■□□□□ 0.03
RFX1-204ENST00000588885 IL6STP40189 918 aaPredicted RBP15.23■□□□□ 0.03
RFX1-204ENST00000588885 WDR43Q15061 677 aaKnown RBP eCLIP15.23■□□□□ 0.03
RFX1-204ENST00000588885 ZNF526Q8TF50 670 aaPredicted RBP15.23■□□□□ 0.03
RFX1-204ENST00000588885 PRKRIP1Q9H875 184 aaPredicted RBP15.23■□□□□ 0.03
RFX1-204ENST00000588885 SERPINB2P05120 415 aa15.22■□□□□ 0.03
RFX1-204ENST00000588885 CHRNA5P30532 468 aa15.22■□□□□ 0.03
RFX1-204ENST00000588885 TBC1D9BQ66K14 1250 aa15.22■□□□□ 0.03
RFX1-204ENST00000588885 MIER1Q8N108 512 aa15.22■□□□□ 0.03
RFX1-204ENST00000588885 C10orf71Q711Q0 1435 aa15.22■□□□□ 0.03
RFX1-204ENST00000588885 ATP10DQ9P241 1426 aa15.22■□□□□ 0.03
RFX1-204ENST00000588885 PXDNLA1KZ92 1463 aa15.21■□□□□ 0.03
RFX1-204ENST00000588885 KCNA3P22001 575 aa15.21■□□□□ 0.03
RFX1-204ENST00000588885 CCDC24Q8N4L8 307 aa15.21■□□□□ 0.03
RFX1-204ENST00000588885 PNISRQ8TF01 805 aaKnown RBP15.21■□□□□ 0.03
RFX1-204ENST00000588885 GPBP1L1Q9HC44 474 aaPredicted RBP15.21■□□□□ 0.03
RFX1-204ENST00000588885 ADAMTS8Q9UP79 889 aa15.21■□□□□ 0.03
RFX1-204ENST00000588885 TMPOP42166 694 aaKnown RBP15.2■□□□□ 0.02
RFX1-204ENST00000588885 ARHGAP27Q6ZUM4 889 aa15.2■□□□□ 0.02
RFX1-204ENST00000588885 DZIP3Q86Y13 1208 aaKnown RBP15.2■□□□□ 0.02
RFX1-204ENST00000588885 NGEFQ8N5V2 710 aa15.2■□□□□ 0.02
RFX1-204ENST00000588885 BRCA1P38398 1863 aaKnown RBP15.19■□□□□ 0.02
RFX1-204ENST00000588885 NBPF26B4DH59 902 aa15.19■□□□□ 0.02
RFX1-204ENST00000588885 ANP32CO43423 234 aa15.19■□□□□ 0.02
RFX1-204ENST00000588885 CAMTA2O94983 1202 aa15.19■□□□□ 0.02
RFX1-204ENST00000588885 EIF4A1P60842 406 aaKnown RBP15.19■□□□□ 0.02
RFX1-204ENST00000588885 NBPF10Q6P3W6 841 aaKnown RBP15.19■□□□□ 0.02
RFX1-204ENST00000588885 NBPF15Q8N660 670 aa15.19■□□□□ 0.02
RFX1-204ENST00000588885 PIM2Q9P1W9 311 aa15.19■□□□□ 0.02
RFX1-204ENST00000588885 ARFGEF1Q9Y6D6 1849 aa15.18■□□□□ 0.02
RFX1-204ENST00000588885 DALRD3Q5D0E6 543 aaKnown RBP15.18■□□□□ 0.02
RFX1-204ENST00000588885 TSPYL4Q9UJ04 414 aa15.18■□□□□ 0.02
RFX1-204ENST00000588885 UBR2Q8IWV8 1755 aa15.18■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms