RNA–Protein interactions for RNA: ENST00000588656.1

CHUK-203, Transcript of conserved helix-loop-helix ubiquitous kinase, humanhuman

TSL 3

Gene CHUK, Length 675 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHUK-203ENST00000588656 AKAP12Q02952 1782 aa8.2□□□□□ -1.1
CHUK-203ENST00000588656 HIC1Q14526 733 aa8.2□□□□□ -1.1
CHUK-203ENST00000588656 FAM161AQ3B820 660 aa8.2□□□□□ -1.1
CHUK-203ENST00000588656 PDZRN3Q9UPQ7 1066 aa8.2□□□□□ -1.1
CHUK-203ENST00000588656 QRICH2Q9H0J4 1663 aa8.2□□□□□ -1.1
CHUK-203ENST00000588656 LMO7Q8WWI1 1683 aa8.19□□□□□ -1.1
CHUK-203ENST00000588656 WASLO00401 505 aaPredicted RBP8.19□□□□□ -1.1
CHUK-203ENST00000588656 CFHP08603 1231 aa8.19□□□□□ -1.1
CHUK-203ENST00000588656 LRRC37A3O60309 1634 aa8.18□□□□□ -1.1
CHUK-203ENST00000588656 PARP4Q9UKK3 1724 aaKnown RBP8.18□□□□□ -1.1
CHUK-203ENST00000588656 RNF223E7ERA6 249 aa8.18□□□□□ -1.1
CHUK-203ENST00000588656 NR1I2O75469 434 aa8.18□□□□□ -1.1
CHUK-203ENST00000588656 APBA3O96018 575 aa8.18□□□□□ -1.1
CHUK-203ENST00000588656 SLC19A1P41440 591 aa8.18□□□□□ -1.1
CHUK-203ENST00000588656 PXYLP1Q8TE99 480 aa8.18□□□□□ -1.1
CHUK-203ENST00000588656 SIRT1Q96EB6 747 aa8.18□□□□□ -1.1
CHUK-203ENST00000588656 SPATA31A1Q5TZJ5 1347 aa8.18□□□□□ -1.1
CHUK-203ENST00000588656 TESPA1A2RU30 521 aaPredicted RBP8.17□□□□□ -1.1
CHUK-203ENST00000588656 SLC10A3P09131 477 aa8.17□□□□□ -1.1
CHUK-203ENST00000588656 LARP1Q6PKG0 1096 aaKnown RBP8.17□□□□□ -1.1
CHUK-203ENST00000588656 NUDT16Q96DE0 195 aaKnown RBP8.17□□□□□ -1.1
CHUK-203ENST00000588656 EVA1CP58658 441 aa8.16□□□□□ -1.1
CHUK-203ENST00000588656 PLCB2Q00722 1185 aa8.16□□□□□ -1.1
CHUK-203ENST00000588656 SSH2Q76I76 1423 aa8.16□□□□□ -1.1
CHUK-203ENST00000588656 ANKLE1Q8NAG6 615 aa8.16□□□□□ -1.1
CHUK-203ENST00000588656 CAMKK2Q96RR4 588 aa8.16□□□□□ -1.1
CHUK-203ENST00000588656 CDK19Q9BWU1 502 aa8.16□□□□□ -1.1
CHUK-203ENST00000588656 PEAK1Q9H792 1746 aa8.15□□□□□ -1.1
CHUK-203ENST00000588656 PIK3C2AO00443 1686 aa8.15□□□□□ -1.1
CHUK-203ENST00000588656 MYOM1P52179 1685 aa8.15□□□□□ -1.1
CHUK-203ENST00000588656 EIF3AQ14152 1382 aaKnown RBP8.15□□□□□ -1.1
CHUK-203ENST00000588656 ACEP12821 1306 aa8.15□□□□□ -1.1
CHUK-203ENST00000588656 LCE2BO14633 110 aa8.15□□□□□ -1.1
CHUK-203ENST00000588656 PTF1AQ7RTS3 328 aa8.15□□□□□ -1.1
CHUK-203ENST00000588656 METTL3Q86U44 580 aaKnown RBP8.15□□□□□ -1.1
CHUK-203ENST00000588656 CASZ1Q86V15 1759 aa8.15□□□□□ -1.11
CHUK-203ENST00000588656 DISP2A7MBM2 1401 aa8.14□□□□□ -1.11
CHUK-203ENST00000588656 GNPATO15228 680 aa8.14□□□□□ -1.11
CHUK-203ENST00000588656 PDE3BQ13370 1112 aa8.14□□□□□ -1.11
CHUK-203ENST00000588656 RBM26Q5T8P6 1007 aaKnown RBP8.14□□□□□ -1.11
CHUK-203ENST00000588656 SCUBE3Q8IX30 993 aa8.14□□□□□ -1.11
CHUK-203ENST00000588656 ABTB2Q8N961 1025 aa8.14□□□□□ -1.11
CHUK-203ENST00000588656 COL18A1P39060 1754 aa8.14□□□□□ -1.11
CHUK-203ENST00000588656 KIAA1210Q9ULL0 1709 aa8.14□□□□□ -1.11
CHUK-203ENST00000588656 ADH1BP00325 375 aa8.13□□□□□ -1.11
CHUK-203ENST00000588656 NBPF1Q3BBV0 1214 aa8.13□□□□□ -1.11
CHUK-203ENST00000588656 SPRYD7Q5W111 196 aa8.13□□□□□ -1.11
CHUK-203ENST00000588656 FAM196AQ6ZSG2 479 aa8.13□□□□□ -1.11
CHUK-203ENST00000588656 COL5A2P05997 1499 aaPredicted RBP8.13□□□□□ -1.11
CHUK-203ENST00000588656 PPIP5K1Q6PFW1 1433 aa8.12□□□□□ -1.11
CHUK-203ENST00000588656 LTN1O94822 1766 aa8.12□□□□□ -1.11
CHUK-203ENST00000588656 TLL1O43897 1013 aa8.12□□□□□ -1.11
CHUK-203ENST00000588656 S1PR4O95977 384 aa8.12□□□□□ -1.11
CHUK-203ENST00000588656 YY1P25490 414 aa8.12□□□□□ -1.11
CHUK-203ENST00000588656 NBPF8Q3BBV2 869 aa8.12□□□□□ -1.11
CHUK-203ENST00000588656 ZNF598Q86UK7 904 aaKnown RBP8.12□□□□□ -1.11
CHUK-203ENST00000588656 PDGFDQ9GZP0 370 aaPredicted RBP8.12□□□□□ -1.11
CHUK-203ENST00000588656 PPP1R1BQ9UD71 204 aaPredicted RBP8.12□□□□□ -1.11
CHUK-203ENST00000588656 DAXXQ9UER7 740 aaPredicted RBP8.12□□□□□ -1.11
CHUK-203ENST00000588656 RGPD3A6NKT7 1758 aaPredicted RBP8.12□□□□□ -1.11
CHUK-203ENST00000588656 RGPD4Q7Z3J3 1758 aa8.12□□□□□ -1.11
CHUK-203ENST00000588656 SRPK2P78362 688 aaKnown RBP8.11□□□□□ -1.11
CHUK-203ENST00000588656 TCP11L2Q8N4U5 519 aa8.11□□□□□ -1.11
CHUK-203ENST00000588656 SLC6A16Q9GZN6 736 aa8.11□□□□□ -1.11
CHUK-203ENST00000588656 CHD4Q14839 1912 aa8.11□□□□□ -1.11
CHUK-203ENST00000588656 POLR3AO14802 1390 aaPredicted RBP8.1□□□□□ -1.11
CHUK-203ENST00000588656 PPEF1O14829 653 aaPredicted RBP8.1□□□□□ -1.11
CHUK-203ENST00000588656 BTAF1O14981 1849 aa8.1□□□□□ -1.11
CHUK-203ENST00000588656 TUBGCP6Q96RT7 1819 aa8.1□□□□□ -1.11
CHUK-203ENST00000588656 RGPD2P0DJD1 1756 aa8.1□□□□□ -1.11
CHUK-203ENST00000588656 USP19O94966 1318 aa8.09□□□□□ -1.11
CHUK-203ENST00000588656 ZBTB7AO95365 584 aa8.09□□□□□ -1.11
CHUK-203ENST00000588656 GCP02774 474 aa8.09□□□□□ -1.11
CHUK-203ENST00000588656 BARGINQ6ZT62 677 aa8.09□□□□□ -1.11
CHUK-203ENST00000588656 EMID1Q96A84 441 aaPredicted RBP8.09□□□□□ -1.11
CHUK-203ENST00000588656 TRPM1Q7Z4N2 1603 aa8.09□□□□□ -1.11
CHUK-203ENST00000588656 CRB1P82279 1406 aa8.09□□□□□ -1.11
CHUK-203ENST00000588656 SLIT3O75094 1523 aa8.08□□□□□ -1.12
CHUK-203ENST00000588656 FECHP22830 423 aa8.08□□□□□ -1.12
CHUK-203ENST00000588656 PRR20EP86478 221 aa8.08□□□□□ -1.12
CHUK-203ENST00000588656 PRR20CP86479 221 aa8.08□□□□□ -1.12
CHUK-203ENST00000588656 PRR20DP86480 221 aa8.08□□□□□ -1.12
CHUK-203ENST00000588656 PRR20BP86481 221 aa8.08□□□□□ -1.12
CHUK-203ENST00000588656 PRR20AP86496 221 aa8.08□□□□□ -1.12
CHUK-203ENST00000588656 NBPF14Q5TI25 921 aa8.08□□□□□ -1.12
CHUK-203ENST00000588656 ZNF787Q6DD87 383 aa8.08□□□□□ -1.12
CHUK-203ENST00000588656 LIAT1Q6ZQX7 453 aa8.08□□□□□ -1.12
CHUK-203ENST00000588656 TRIM67Q6ZTA4 783 aa8.08□□□□□ -1.12
CHUK-203ENST00000588656 TOM1L2Q6ZVM7 507 aa8.08□□□□□ -1.12
CHUK-203ENST00000588656 RDH13Q8NBN7 331 aa8.08□□□□□ -1.12
CHUK-203ENST00000588656 SPSB2Q99619 263 aa8.08□□□□□ -1.12
CHUK-203ENST00000588656 OVOS2A0A0G2JMS6 1433 aa8.08□□□□□ -1.12
CHUK-203ENST00000588656 OVOS2A0A0J9YW53 1432 aa8.08□□□□□ -1.12
CHUK-203ENST00000588656 OVOS2Q6IE36 1432 aa8.08□□□□□ -1.12
CHUK-203ENST00000588656 MON2Q7Z3U7 1717 aa8.08□□□□□ -1.12
CHUK-203ENST00000588656 UTRNP46939 3433 aa8.07□□□□□ -1.12
CHUK-203ENST00000588656 USP6P35125 1406 aa8.07□□□□□ -1.12
CHUK-203ENST00000588656 KCNQ2O43526 872 aa8.07□□□□□ -1.12
CHUK-203ENST00000588656 DGAT1O75907 488 aa8.07□□□□□ -1.12
CHUK-203ENST00000588656 PUS10Q3MIT2 529 aaKnown RBP8.07□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms