RNA–Protein interactions for RNA: ENST00000588618.5

ACTN4-210, Transcript of actinin alpha 4, humanhuman

TSL 1 (best)

Gene ACTN4, Length 1,729 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-210ENST00000588618 STARD3NLO95772 234 aa28.95■■■□□ 2.23
ACTN4-210ENST00000588618 CHPF2Q9P2E5 772 aa28.95■■■□□ 2.23
ACTN4-210ENST00000588618 DNAJC10Q8IXB1 793 aa28.94■■■□□ 2.22
ACTN4-210ENST00000588618 TNNQ9UQP3 1299 aa28.94■■■□□ 2.22
ACTN4-210ENST00000588618 ANXA1P04083 346 aa28.94■■■□□ 2.22
ACTN4-210ENST00000588618 SLC4A2P04920 1241 aa28.94■■■□□ 2.22
ACTN4-210ENST00000588618 KIF16BQ96L93 1317 aa28.93■■■□□ 2.22
ACTN4-210ENST00000588618 TNS1Q9HBL0 1735 aaKnown RBP28.93■■■□□ 2.22
ACTN4-210ENST00000588618 PROSER3Q2NL68 480 aa28.93■■■□□ 2.22
ACTN4-210ENST00000588618 G2E3Q7L622 706 aa28.93■■■□□ 2.22
ACTN4-210ENST00000588618 FRAT1Q92837 279 aaPredicted RBP28.93■■■□□ 2.22
ACTN4-210ENST00000588618 DBF4Q9UBU7 674 aaPredicted RBP28.93■■■□□ 2.22
ACTN4-210ENST00000588618 NOB1Q9ULX3 412 aaKnown RBP28.93■■■□□ 2.22
ACTN4-210ENST00000588618 COL5A3P25940 1745 aaPredicted RBP28.93■■■□□ 2.22
ACTN4-210ENST00000588618 PDIA6Q15084 440 aa28.92■■■□□ 2.22
ACTN4-210ENST00000588618 APBA3O96018 575 aa28.91■■■□□ 2.22
ACTN4-210ENST00000588618 IRX6P78412 446 aaPredicted RBP28.91■■■□□ 2.22
ACTN4-210ENST00000588618 C20orf194Q5TEA3 1177 aa28.91■■■□□ 2.22
ACTN4-210ENST00000588618 CCNL1Q9UK58 526 aaPredicted RBP28.91■■■□□ 2.22
ACTN4-210ENST00000588618 PIP4K2AP48426 406 aaPredicted RBP28.9■■■□□ 2.22
ACTN4-210ENST00000588618 ITPK1Q13572 414 aa28.9■■■□□ 2.22
ACTN4-210ENST00000588618 MYH14Q7Z406 1995 aaKnown RBP28.9■■■□□ 2.22
ACTN4-210ENST00000588618 SF3B2Q13435 895 aaKnown RBP28.89■■■□□ 2.22
ACTN4-210ENST00000588618 IPO8O15397 1037 aaKnown RBP28.89■■■□□ 2.21
ACTN4-210ENST00000588618 PHAXQ9H814 394 aaKnown RBP28.89■■■□□ 2.21
ACTN4-210ENST00000588618 ERBB4Q15303 1308 aa28.88■■■□□ 2.21
ACTN4-210ENST00000588618 TAF1LQ8IZX4 1826 aa28.88■■■□□ 2.21
ACTN4-210ENST00000588618 A1BGP04217 495 aa28.88■■■□□ 2.21
ACTN4-210ENST00000588618 KCNQ4P56696 695 aa28.88■■■□□ 2.21
ACTN4-210ENST00000588618 DDX21Q9NR30 783 aaKnown RBP eCLIP28.88■■■□□ 2.21
ACTN4-210ENST00000588618 NBPF26B4DH59 902 aa28.87■■■□□ 2.21
ACTN4-210ENST00000588618 NBPF14Q5TI25 921 aa28.87■■■□□ 2.21
ACTN4-210ENST00000588618 NBPF10Q6P3W6 841 aaKnown RBP28.87■■■□□ 2.21
ACTN4-210ENST00000588618 LRP10Q7Z4F1 713 aa28.87■■■□□ 2.21
ACTN4-210ENST00000588618 NBPF15Q8N660 670 aa28.87■■■□□ 2.21
ACTN4-210ENST00000588618 CYP19A1P11511 503 aaPredicted RBP28.86■■■□□ 2.21
ACTN4-210ENST00000588618 TRIM27P14373 513 aa28.86■■■□□ 2.21
ACTN4-210ENST00000588618 HYPKQ9NX55 129 aa28.86■■■□□ 2.21
ACTN4-210ENST00000588618 RREB1Q92766 1687 aa28.86■■■□□ 2.21
ACTN4-210ENST00000588618 MYL6BP14649 208 aa28.86■■■□□ 2.21
ACTN4-210ENST00000588618 ZKSCAN2Q63HK3 967 aa28.85■■■□□ 2.21
ACTN4-210ENST00000588618 PLSCR1O15162 318 aa28.84■■■□□ 2.21
ACTN4-210ENST00000588618 RLBP1P12271 317 aa28.84■■■□□ 2.21
ACTN4-210ENST00000588618 HMGB2P26583 209 aaKnown RBP28.84■■■□□ 2.21
ACTN4-210ENST00000588618 FLIIQ13045 1269 aa28.84■■■□□ 2.21
ACTN4-210ENST00000588618 SLC27A3Q5K4L6 730 aa28.84■■■□□ 2.21
ACTN4-210ENST00000588618 ATF7IPQ6VMQ6 1270 aa28.84■■■□□ 2.21
ACTN4-210ENST00000588618 NPM2Q86SE8 214 aaKnown RBP28.83■■■□□ 2.21
ACTN4-210ENST00000588618 PTPRCP08575 1304 aa28.83■■■□□ 2.21
ACTN4-210ENST00000588618 CLUAP1Q96AJ1 413 aa28.83■■■□□ 2.21
ACTN4-210ENST00000588618 NEFLP07196 543 aa28.82■■■□□ 2.2
ACTN4-210ENST00000588618 PANK1Q8TE04 598 aa28.82■■■□□ 2.2
ACTN4-210ENST00000588618 ARHGAP45Q92619 1136 aa28.82■■■□□ 2.2
ACTN4-210ENST00000588618 FKBP5Q13451 457 aaPredicted RBP28.81■■■□□ 2.2
ACTN4-210ENST00000588618 LINC00116Q8NCU8 138 aa28.81■■■□□ 2.2
ACTN4-210ENST00000588618 CRKLP46109 303 aaKnown RBP28.8■■■□□ 2.2
ACTN4-210ENST00000588618 CCDC87Q9NVE4 849 aa28.8■■■□□ 2.2
ACTN4-210ENST00000588618 ZNF330Q9Y3S2 320 aaPredicted RBP28.8■■■□□ 2.2
ACTN4-210ENST00000588618 MS4A1P11836 297 aa28.8■■■□□ 2.2
ACTN4-210ENST00000588618 FTSJ3Q8IY81 847 aaKnown RBP28.8■■■□□ 2.2
ACTN4-210ENST00000588618 ZBTB1Q9Y2K1 713 aa28.8■■■□□ 2.2
ACTN4-210ENST00000588618 TXNRD1Q16881 649 aa28.79■■■□□ 2.2
ACTN4-210ENST00000588618 API5Q9BZZ5 524 aaKnown RBP28.79■■■□□ 2.2
ACTN4-210ENST00000588618 LRRC4BQ9NT99 713 aa28.79■■■□□ 2.2
ACTN4-210ENST00000588618 INTS5Q6P9B9 1019 aaKnown RBP28.78■■■□□ 2.2
ACTN4-210ENST00000588618 DDX58O95786 925 aaKnown RBP28.77■■■□□ 2.2
ACTN4-210ENST00000588618 BAG6P46379 1132 aa28.77■■■□□ 2.2
ACTN4-210ENST00000588618 AIMP1Q12904 312 aaKnown RBP28.77■■■□□ 2.2
ACTN4-210ENST00000588618 PDE3AQ14432 1141 aa28.77■■■□□ 2.2
ACTN4-210ENST00000588618 CCDC125Q86Z20 511 aa28.77■■■□□ 2.2
ACTN4-210ENST00000588618 DZIP1LQ8IYY4 767 aaKnown RBP28.77■■■□□ 2.2
ACTN4-210ENST00000588618 PROM2Q8N271 834 aa28.77■■■□□ 2.2
ACTN4-210ENST00000588618 RGPD3A6NKT7 1758 aaPredicted RBP28.77■■■□□ 2.2
ACTN4-210ENST00000588618 RGPD4Q7Z3J3 1758 aa28.77■■■□□ 2.2
ACTN4-210ENST00000588618 ABCC4O15439 1325 aa28.76■■■□□ 2.19
ACTN4-210ENST00000588618 F6X3S4 739 aa28.76■■■□□ 2.19
ACTN4-210ENST00000588618 FKBP8Q14318 412 aa28.76■■■□□ 2.19
ACTN4-210ENST00000588618 XAGE3Q8WTP9 111 aa28.76■■■□□ 2.19
ACTN4-210ENST00000588618 CNTNAP4Q9C0A0 1308 aa28.76■■■□□ 2.19
ACTN4-210ENST00000588618 N4BP2Q86UW6 1770 aaPredicted RBP28.75■■■□□ 2.19
ACTN4-210ENST00000588618 C4BP0C0L5 1744 aa28.75■■■□□ 2.19
ACTN4-210ENST00000588618 IL6STP40189 918 aaPredicted RBP28.74■■■□□ 2.19
ACTN4-210ENST00000588618 COPS6Q7L5N1 327 aa28.74■■■□□ 2.19
ACTN4-210ENST00000588618 CRBNQ96SW2 442 aa28.74■■■□□ 2.19
ACTN4-210ENST00000588618 ADCY9O60503 1353 aa28.74■■■□□ 2.19
ACTN4-210ENST00000588618 NUP188Q5SRE5 1749 aa28.74■■■□□ 2.19
ACTN4-210ENST00000588618 ARFGEF2Q9Y6D5 1785 aa28.73■■■□□ 2.19
ACTN4-210ENST00000588618 RC3H1Q5TC82 1133 aaKnown RBP28.73■■■□□ 2.19
ACTN4-210ENST00000588618 TMEM57Q8N5G2 664 aa28.73■■■□□ 2.19
ACTN4-210ENST00000588618 AK7Q96M32 723 aa28.73■■■□□ 2.19
ACTN4-210ENST00000588618 ARXQ96QS3 562 aa28.73■■■□□ 2.19
ACTN4-210ENST00000588618 TTLL7Q6ZT98 887 aa28.72■■■□□ 2.19
ACTN4-210ENST00000588618 COG6Q9Y2V7 657 aa28.72■■■□□ 2.19
ACTN4-210ENST00000588618 EN1Q05925 392 aaPredicted RBP28.72■■■□□ 2.19
ACTN4-210ENST00000588618 PI4KAP2A4QPH2 592 aa28.71■■■□□ 2.19
ACTN4-210ENST00000588618 PI4KAP1Q8N8J0 262 aa28.71■■■□□ 2.19
ACTN4-210ENST00000588618 EXOC6Q8TAG9 804 aa28.71■■■□□ 2.19
ACTN4-210ENST00000588618 GTF3C3Q9Y5Q9 886 aa28.71■■■□□ 2.19
ACTN4-210ENST00000588618 GNPATO15228 680 aa28.7■■■□□ 2.19
ACTN4-210ENST00000588618 KIF6Q6ZMV9 814 aa28.7■■■□□ 2.19
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms