RNA–Protein interactions for RNA: ENST00000588483.1

TPM4-209, Transcript of tropomyosin 4, humanhuman

TSL 5

Gene TPM4, Length 801 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-209ENST00000588483 TAF7Q15545 349 aaPredicted RBP13.89□□□□□ -0.19
TPM4-209ENST00000588483 DCAF8L1A6NGE4 600 aa13.88□□□□□ -0.19
TPM4-209ENST00000588483 KCNQ3O43525 872 aa13.88□□□□□ -0.19
TPM4-209ENST00000588483 EIF5P55010 431 aaKnown RBP13.88□□□□□ -0.19
TPM4-209ENST00000588483 NLGN2Q8NFZ4 835 aa13.88□□□□□ -0.19
TPM4-209ENST00000588483 KIAA1551Q9HCM1 1747 aa13.87□□□□□ -0.19
TPM4-209ENST00000588483 LAMB4A4D0S4 1761 aa13.87□□□□□ -0.19
TPM4-209ENST00000588483 MMP10P09238 476 aa13.87□□□□□ -0.19
TPM4-209ENST00000588483 PNISRQ8TF01 805 aaKnown RBP13.87□□□□□ -0.19
TPM4-209ENST00000588483 NARFQ9UHQ1 456 aa13.87□□□□□ -0.19
TPM4-209ENST00000588483 C10orf71Q711Q0 1435 aa13.87□□□□□ -0.19
TPM4-209ENST00000588483 SCN7AQ01118 1682 aa13.86□□□□□ -0.19
TPM4-209ENST00000588483 IL6STP40189 918 aaPredicted RBP13.86□□□□□ -0.19
TPM4-209ENST00000588483 TMPOP42166 694 aaKnown RBP13.86□□□□□ -0.19
TPM4-209ENST00000588483 CHD4Q14839 1912 aa13.86□□□□□ -0.19
TPM4-209ENST00000588483 NRXN2Q9P2S2 1712 aa13.85□□□□□ -0.19
TPM4-209ENST00000588483 SNRPA1P09661 255 aaKnown RBP13.85□□□□□ -0.19
TPM4-209ENST00000588483 LMOD3Q0VAK6 560 aa13.85□□□□□ -0.19
TPM4-209ENST00000588483 WDR43Q15061 677 aaKnown RBP eCLIP13.85□□□□□ -0.191e-6■□□□□ 11.1
TPM4-209ENST00000588483 RUNDC1Q96C34 613 aa13.85□□□□□ -0.19
TPM4-209ENST00000588483 BABAM1Q9NWV8 329 aa13.85□□□□□ -0.19
TPM4-209ENST00000588483 SRP68Q9UHB9 627 aaKnown RBP13.85□□□□□ -0.19
TPM4-209ENST00000588483 ADAMTS8Q9UP79 889 aa13.85□□□□□ -0.19
TPM4-209ENST00000588483 A0A087WZG4 1122 aa13.84□□□□□ -0.19
TPM4-209ENST00000588483 ZPR1O75312 459 aa13.84□□□□□ -0.19
TPM4-209ENST00000588483 TM4SF1P30408 202 aa13.84□□□□□ -0.19
TPM4-209ENST00000588483 RIPK4P57078 832 aa13.84□□□□□ -0.19
TPM4-209ENST00000588483 FKBP8Q14318 412 aa13.84□□□□□ -0.19
TPM4-209ENST00000588483 KLHL34Q8N239 644 aa13.84□□□□□ -0.19
TPM4-209ENST00000588483 BCORQ6W2J9 1755 aa13.83□□□□□ -0.19
TPM4-209ENST00000588483 CANXP27824 592 aaKnown RBP13.83□□□□□ -0.2
TPM4-209ENST00000588483 USPL1Q5W0Q7 1092 aa13.83□□□□□ -0.2
TPM4-209ENST00000588483 BCL2L12Q9HB09 334 aa13.83□□□□□ -0.2
TPM4-209ENST00000588483 USP16Q9Y5T5 823 aa13.83□□□□□ -0.2
TPM4-209ENST00000588483 PXDNLA1KZ92 1463 aa13.82□□□□□ -0.2
TPM4-209ENST00000588483 POLRMTO00411 1230 aaKnown RBP13.82□□□□□ -0.2
TPM4-209ENST00000588483 RGL2O15211 777 aa13.82□□□□□ -0.2
TPM4-209ENST00000588483 EIF4A1P60842 406 aaKnown RBP13.82□□□□□ -0.2
TPM4-209ENST00000588483 TGFB2P61812 414 aa13.82□□□□□ -0.2
TPM4-209ENST00000588483 DDR1Q08345 913 aa13.82□□□□□ -0.2
TPM4-209ENST00000588483 THUMPD2Q9BTF0 503 aaKnown RBP13.82□□□□□ -0.2
TPM4-209ENST00000588483 PARP3Q9Y6F1 533 aa13.82□□□□□ -0.2
TPM4-209ENST00000588483 BRCA1P38398 1863 aaKnown RBP13.82□□□□□ -0.2
TPM4-209ENST00000588483 AFDNP55196 1824 aaKnown RBP13.81□□□□□ -0.2
TPM4-209ENST00000588483 PRAMEF22A3QJZ6 481 aa13.81□□□□□ -0.2
TPM4-209ENST00000588483 GIGYF1O75420 1035 aaPredicted RBP13.81□□□□□ -0.2
TPM4-209ENST00000588483 A1BGP04217 495 aa13.81□□□□□ -0.2
TPM4-209ENST00000588483 CCDC146Q8IYE0 955 aa13.81□□□□□ -0.2
TPM4-209ENST00000588483 YBX3P16989 372 aaKnown RBP eCLIP13.8□□□□□ -0.2
TPM4-209ENST00000588483 GPR162Q16538 588 aa13.8□□□□□ -0.2
TPM4-209ENST00000588483 MIS18AQ9NYP9 233 aa13.8□□□□□ -0.2
TPM4-209ENST00000588483 TRIM35Q9UPQ4 493 aa13.8□□□□□ -0.2
TPM4-209ENST00000588483 N4BP2Q86UW6 1770 aaPredicted RBP13.79□□□□□ -0.2
TPM4-209ENST00000588483 GRIN3BO60391 1043 aa13.79□□□□□ -0.2
TPM4-209ENST00000588483 NFIXQ14938 502 aa13.79□□□□□ -0.2
TPM4-209ENST00000588483 NBPF26B4DH59 902 aa13.78□□□□□ -0.2
TPM4-209ENST00000588483 CAMTA2O94983 1202 aa13.78□□□□□ -0.2
TPM4-209ENST00000588483 YY1P25490 414 aa13.78□□□□□ -0.2
TPM4-209ENST00000588483 NBPF10Q6P3W6 841 aaKnown RBP13.78□□□□□ -0.2
TPM4-209ENST00000588483 NBPF15Q8N660 670 aa13.78□□□□□ -0.2
TPM4-209ENST00000588483 TSPYL4Q9UJ04 414 aa13.78□□□□□ -0.2
TPM4-209ENST00000588483 ERBB4Q15303 1308 aa13.78□□□□□ -0.2
TPM4-209ENST00000588483 CHL1O00533 1208 aa13.77□□□□□ -0.21
TPM4-209ENST00000588483 ANP32CO43423 234 aa13.77□□□□□ -0.21
TPM4-209ENST00000588483 CLEC4GQ6UXB4 293 aa13.77□□□□□ -0.21
TPM4-209ENST00000588483 RRP7AQ9Y3A4 280 aaKnown RBP13.77□□□□□ -0.21
TPM4-209ENST00000588483 ARFGEF1Q9Y6D6 1849 aa13.76□□□□□ -0.21
TPM4-209ENST00000588483 DLEC1Q9Y238 1755 aa13.76□□□□□ -0.21
TPM4-209ENST00000588483 CARMIL3Q8ND23 1372 aa13.76□□□□□ -0.21
TPM4-209ENST00000588483 CCDC184Q52MB2 194 aa13.76□□□□□ -0.21
TPM4-209ENST00000588483 NCBP3Q53F19 620 aaKnown RBP13.76□□□□□ -0.21
TPM4-209ENST00000588483 NPM2Q86SE8 214 aaKnown RBP13.76□□□□□ -0.21
TPM4-209ENST00000588483 DZIP3Q86Y13 1208 aaKnown RBP13.76□□□□□ -0.21
TPM4-209ENST00000588483 TBC1D2BQ9UPU7 963 aa13.76□□□□□ -0.21
TPM4-209ENST00000588483 KCNA3P22001 575 aa13.75□□□□□ -0.21
TPM4-209ENST00000588483 TBC1D9BQ66K14 1250 aa13.75□□□□□ -0.21
TPM4-209ENST00000588483 APAF1O14727 1248 aa13.74□□□□□ -0.21
TPM4-209ENST00000588483 SERPINB2P05120 415 aa13.74□□□□□ -0.21
TPM4-209ENST00000588483 ZNF853P0CG23 659 aa13.74□□□□□ -0.21
TPM4-209ENST00000588483 NEUROD2Q15784 382 aa13.74□□□□□ -0.21
TPM4-209ENST00000588483 CFAP44Q96MT7 982 aa13.74□□□□□ -0.21
TPM4-209ENST00000588483 ZNF330Q9Y3S2 320 aaPredicted RBP13.74□□□□□ -0.21
TPM4-209ENST00000588483 ANKRD31Q8N7Z5 1873 aa13.74□□□□□ -0.21
TPM4-209ENST00000588483 A0A0G2JLW4 131 aa13.73□□□□□ -0.21
TPM4-209ENST00000588483 HOXB7P09629 217 aa13.73□□□□□ -0.21
TPM4-209ENST00000588483 DPEP1P16444 411 aa13.73□□□□□ -0.21
TPM4-209ENST00000588483 PIP4K2AP48426 406 aaPredicted RBP13.73□□□□□ -0.21
TPM4-209ENST00000588483 LRP10Q7Z4F1 713 aa13.73□□□□□ -0.21
TPM4-209ENST00000588483 PELP1Q8IZL8 1130 aaKnown RBP13.73□□□□□ -0.21
TPM4-209ENST00000588483 ZNF652Q9Y2D9 606 aa13.73□□□□□ -0.21
TPM4-209ENST00000588483 ERVV-1B6SEH8 477 aa13.72□□□□□ -0.21
TPM4-209ENST00000588483 CCDC27Q2M243 656 aa13.72□□□□□ -0.21
TPM4-209ENST00000588483 ATP10DQ9P241 1426 aa13.72□□□□□ -0.21
TPM4-209ENST00000588483 NUP98P52948 1817 aa13.71□□□□□ -0.21
TPM4-209ENST00000588483 CALD1Q05682 793 aaKnown RBP13.71□□□□□ -0.21
TPM4-209ENST00000588483 PDIA6Q15084 440 aa13.71□□□□□ -0.21
TPM4-209ENST00000588483 PRR5LQ6MZQ0 368 aa13.71□□□□□ -0.21
TPM4-209ENST00000588483 SETDB2Q96T68 719 aa13.71□□□□□ -0.21
TPM4-209ENST00000588483 MRS2Q9HD23 443 aa13.71□□□□□ -0.21
TPM4-209ENST00000588483 IFT57Q9NWB7 429 aa13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms