RNA–Protein interactions for RNA: ENST00000588410.1

TPM4-208, Transcript of tropomyosin 4, humanhuman

TSL 4

Gene TPM4, Length 563 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-208ENST00000588410 COL15A1P39059 1388 aa25.87■■□□□ 1.73
TPM4-208ENST00000588410 YBX3P16989 372 aaKnown RBP eCLIP25.87■■□□□ 1.73
TPM4-208ENST00000588410 NFE2L2Q16236 605 aa25.87■■□□□ 1.73
TPM4-208ENST00000588410 USPL1Q5W0Q7 1092 aa25.87■■□□□ 1.73
TPM4-208ENST00000588410 NARFQ9UHQ1 456 aa25.86■■□□□ 1.73
TPM4-208ENST00000588410 A0A087WZG4 1122 aa25.85■■□□□ 1.73
TPM4-208ENST00000588410 TAF7Q15545 349 aaPredicted RBP25.85■■□□□ 1.73
TPM4-208ENST00000588410 NPM2Q86SE8 214 aaKnown RBP25.85■■□□□ 1.73
TPM4-208ENST00000588410 ZNF330Q9Y3S2 320 aaPredicted RBP25.84■■□□□ 1.73
TPM4-208ENST00000588410 TGFB2P61812 414 aa25.83■■□□□ 1.73
TPM4-208ENST00000588410 WWC3Q9ULE0 1092 aa25.83■■□□□ 1.73
TPM4-208ENST00000588410 MYH14Q7Z406 1995 aaKnown RBP25.83■■□□□ 1.73
TPM4-208ENST00000588410 SNRPA1P09661 255 aaKnown RBP25.82■■□□□ 1.72
TPM4-208ENST00000588410 EIF5P55010 431 aaKnown RBP25.82■■□□□ 1.72
TPM4-208ENST00000588410 WDR43Q15061 677 aaKnown RBP eCLIP25.82■■□□□ 1.721e-6■□□□□ 11.1
TPM4-208ENST00000588410 PNISRQ8TF01 805 aaKnown RBP25.82■■□□□ 1.72
TPM4-208ENST00000588410 A1BGP04217 495 aa25.8■■□□□ 1.72
TPM4-208ENST00000588410 IL6STP40189 918 aaPredicted RBP25.8■■□□□ 1.72
TPM4-208ENST00000588410 DDR1Q08345 913 aa25.8■■□□□ 1.72
TPM4-208ENST00000588410 PRKRIP1Q9H875 184 aaPredicted RBP25.8■■□□□ 1.72
TPM4-208ENST00000588410 C10orf71Q711Q0 1435 aa25.8■■□□□ 1.72
TPM4-208ENST00000588410 UBR2Q8IWV8 1755 aa25.79■■□□□ 1.72
TPM4-208ENST00000588410 TM4SF1P30408 202 aa25.79■■□□□ 1.72
TPM4-208ENST00000588410 MIS18AQ9NYP9 233 aa25.79■■□□□ 1.72
TPM4-208ENST00000588410 POLRMTO00411 1230 aaKnown RBP25.78■■□□□ 1.72
TPM4-208ENST00000588410 USP16Q9Y5T5 823 aa25.78■■□□□ 1.72
TPM4-208ENST00000588410 VIRMAQ69YN4 1812 aaKnown RBP25.77■■□□□ 1.72
TPM4-208ENST00000588410 A0A0G2JLW4 131 aa25.77■■□□□ 1.72
TPM4-208ENST00000588410 RIPK4P57078 832 aa25.77■■□□□ 1.72
TPM4-208ENST00000588410 THUMPD2Q9BTF0 503 aaKnown RBP25.77■■□□□ 1.72
TPM4-208ENST00000588410 C4AP0C0L4 1744 aa25.77■■□□□ 1.72
TPM4-208ENST00000588410 NFIXQ14938 502 aa25.76■■□□□ 1.71
TPM4-208ENST00000588410 BCL2L12Q9HB09 334 aa25.76■■□□□ 1.71
TPM4-208ENST00000588410 SIPA1L3O60292 1781 aaPredicted RBP25.76■■□□□ 1.71
TPM4-208ENST00000588410 PXDNLA1KZ92 1463 aa25.75■■□□□ 1.71
TPM4-208ENST00000588410 PRAMEF22A3QJZ6 481 aa25.75■■□□□ 1.71
TPM4-208ENST00000588410 DPEP1P16444 411 aa25.75■■□□□ 1.71
TPM4-208ENST00000588410 LMOD3Q0VAK6 560 aa25.75■■□□□ 1.71
TPM4-208ENST00000588410 TBC1D2BQ9UPU7 963 aa25.75■■□□□ 1.71
TPM4-208ENST00000588410 CCDC146Q8IYE0 955 aa25.74■■□□□ 1.71
TPM4-208ENST00000588410 ZNF784Q8NCA9 323 aaPredicted RBP25.74■■□□□ 1.71
TPM4-208ENST00000588410 BICDL1Q6ZP65 573 aa25.73■■□□□ 1.71
TPM4-208ENST00000588410 BCS1LQ9Y276 419 aa25.73■■□□□ 1.71
TPM4-208ENST00000588410 SERPINB2P05120 415 aa25.72■■□□□ 1.71
TPM4-208ENST00000588410 TMPOP42166 694 aaKnown RBP25.72■■□□□ 1.71
TPM4-208ENST00000588410 PIP4K2AP48426 406 aaPredicted RBP25.71■■□□□ 1.71
TPM4-208ENST00000588410 DZIP3Q86Y13 1208 aaKnown RBP25.71■■□□□ 1.71
TPM4-208ENST00000588410 RUNDC1Q96C34 613 aa25.71■■□□□ 1.71
TPM4-208ENST00000588410 NEUROD2Q15784 382 aa25.7■■□□□ 1.7
TPM4-208ENST00000588410 ADAMTS8Q9UP79 889 aa25.7■■□□□ 1.7
TPM4-208ENST00000588410 RRP7AQ9Y3A4 280 aaKnown RBP25.7■■□□□ 1.7
TPM4-208ENST00000588410 EIF4A1P60842 406 aaKnown RBP25.69■■□□□ 1.7
TPM4-208ENST00000588410 PIM2Q9P1W9 311 aa25.69■■□□□ 1.7
TPM4-208ENST00000588410 TSPYL4Q9UJ04 414 aa25.69■■□□□ 1.7
TPM4-208ENST00000588410 UTRNP46939 3433 aa25.69■■□□□ 1.7
TPM4-208ENST00000588410 ZNF316A6NFI3 1004 aaPredicted RBP25.68■■□□□ 1.7
TPM4-208ENST00000588410 TBC1D9BQ66K14 1250 aa25.68■■□□□ 1.7
TPM4-208ENST00000588410 GIGYF1O75420 1035 aaPredicted RBP25.67■■□□□ 1.7
TPM4-208ENST00000588410 CAMTA2O94983 1202 aa25.67■■□□□ 1.7
TPM4-208ENST00000588410 CHRNA5P30532 468 aa25.66■■□□□ 1.7
TPM4-208ENST00000588410 KCNA3P22001 575 aa25.65■■□□□ 1.7
TPM4-208ENST00000588410 DALRD3Q5D0E6 543 aaKnown RBP25.65■■□□□ 1.7
TPM4-208ENST00000588410 SETDB2Q96T68 719 aa25.65■■□□□ 1.7
TPM4-208ENST00000588410 ZNF652Q9Y2D9 606 aa25.65■■□□□ 1.7
TPM4-208ENST00000588410 NBPF26B4DH59 902 aa25.64■■□□□ 1.7
TPM4-208ENST00000588410 NPHP1O15259 732 aa25.64■■□□□ 1.7
TPM4-208ENST00000588410 NBPF10Q6P3W6 841 aaKnown RBP25.64■■□□□ 1.7
TPM4-208ENST00000588410 NBPF15Q8N660 670 aa25.64■■□□□ 1.7
TPM4-208ENST00000588410 BABAM1Q9NWV8 329 aa25.64■■□□□ 1.7
TPM4-208ENST00000588410 ARHGAP27Q6ZUM4 889 aa25.63■■□□□ 1.69
TPM4-208ENST00000588410 CARMIL3Q8ND23 1372 aa25.63■■□□□ 1.69
TPM4-208ENST00000588410 CLEC4GQ6UXB4 293 aa25.62■■□□□ 1.69
TPM4-208ENST00000588410 KIF13BQ9NQT8 1826 aa25.61■■□□□ 1.69
TPM4-208ENST00000588410 GOLGB1Q14789 3259 aaKnown RBP25.6■■□□□ 1.69
TPM4-208ENST00000588410 C2CD5Q86YS7 1000 aa25.6■■□□□ 1.69
TPM4-208ENST00000588410 NGEFQ8N5V2 710 aa25.6■■□□□ 1.69
TPM4-208ENST00000588410 H0YIN7 160 aa25.59■■□□□ 1.69
TPM4-208ENST00000588410 CNBD1Q8NA66 436 aa25.59■■□□□ 1.69
TPM4-208ENST00000588410 LAS1LQ9Y4W2 734 aaKnown RBP25.59■■□□□ 1.69
TPM4-208ENST00000588410 CHD4Q14839 1912 aa25.59■■□□□ 1.69
TPM4-208ENST00000588410 PRR5LQ6MZQ0 368 aa25.58■■□□□ 1.69
TPM4-208ENST00000588410 TRIM35Q9UPQ4 493 aa25.58■■□□□ 1.69
TPM4-208ENST00000588410 RGL2O15211 777 aa25.57■■□□□ 1.68
TPM4-208ENST00000588410 MYL6BP14649 208 aa25.57■■□□□ 1.68
TPM4-208ENST00000588410 PDE6BP35913 854 aa25.57■■□□□ 1.68
TPM4-208ENST00000588410 ST5P78524 1137 aa25.57■■□□□ 1.68
TPM4-208ENST00000588410 BRIP1Q9BX63 1249 aa25.57■■□□□ 1.68
TPM4-208ENST00000588410 DLG5Q8TDM6 1919 aa25.57■■□□□ 1.68
TPM4-208ENST00000588410 KIF6Q6ZMV9 814 aa25.56■■□□□ 1.68
TPM4-208ENST00000588410 NBPF5PQ86XG9 351 aaPredicted RBP25.56■■□□□ 1.68
TPM4-208ENST00000588410 CCDC24Q8N4L8 307 aa25.56■■□□□ 1.68
TPM4-208ENST00000588410 PDZRN3Q9UPQ7 1066 aa25.56■■□□□ 1.68
TPM4-208ENST00000588410 KIAA1551Q9HCM1 1747 aa25.56■■□□□ 1.68
TPM4-208ENST00000588410 N4BP2Q86UW6 1770 aaPredicted RBP25.56■■□□□ 1.68
TPM4-208ENST00000588410 ATP10DQ9P241 1426 aa25.55■■□□□ 1.68
TPM4-208ENST00000588410 SCN7AQ01118 1682 aa25.55■■□□□ 1.68
TPM4-208ENST00000588410 ANP32CO43423 234 aa25.55■■□□□ 1.68
TPM4-208ENST00000588410 EIF2S2P20042 333 aaKnown RBP25.55■■□□□ 1.68
TPM4-208ENST00000588410 NIP7Q9Y221 180 aaKnown RBP eCLIP25.55■■□□□ 1.68
TPM4-208ENST00000588410 ERBB4Q15303 1308 aa25.55■■□□□ 1.68
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms