RNA–Protein interactions for RNA: ENST00000587502.2

LSM7-204, Transcript of LSM7 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 1 (best) BASIC

Gene LSM7, Length 575 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM7-204ENST00000587502 ZBTB1Q9Y2K1 713 aa30.94■■■□□ 2.54
LSM7-204ENST00000587502 YBX3P16989 372 aaKnown RBP eCLIP30.93■■■□□ 2.54
LSM7-204ENST00000587502 TGFB2P61812 414 aa30.92■■■□□ 2.54
LSM7-204ENST00000587502 FKBP8Q14318 412 aa30.92■■■□□ 2.54
LSM7-204ENST00000587502 PLEKHF1Q96S99 279 aa30.92■■■□□ 2.54
LSM7-204ENST00000587502 COL15A1P39059 1388 aa30.92■■■□□ 2.54
LSM7-204ENST00000587502 NARFQ9UHQ1 456 aa30.91■■■□□ 2.54
LSM7-204ENST00000587502 MYBBP1AQ9BQG0 1328 aaKnown RBP30.91■■■□□ 2.54
LSM7-204ENST00000587502 A0A087WZG4 1122 aa30.9■■■□□ 2.54
LSM7-204ENST00000587502 CANXP27824 592 aaKnown RBP30.9■■■□□ 2.54
LSM7-204ENST00000587502 USPL1Q5W0Q7 1092 aa30.9■■■□□ 2.54
LSM7-204ENST00000587502 MAPK8IP3Q9UPT6 1336 aa30.9■■■□□ 2.54
LSM7-204ENST00000587502 C10orf71Q711Q0 1435 aa30.88■■■□□ 2.53
LSM7-204ENST00000587502 KIF13BQ9NQT8 1826 aa30.87■■■□□ 2.53
LSM7-204ENST00000587502 EIF5P55010 431 aaKnown RBP30.87■■■□□ 2.53
LSM7-204ENST00000587502 DCTN1Q14203 1278 aa30.87■■■□□ 2.53
LSM7-204ENST00000587502 TAF7Q15545 349 aaPredicted RBP30.87■■■□□ 2.53
LSM7-204ENST00000587502 NFE2L2Q16236 605 aa30.87■■■□□ 2.53
LSM7-204ENST00000587502 KCNQ3O43525 872 aa30.86■■■□□ 2.53
LSM7-204ENST00000587502 TM4SF1P30408 202 aa30.86■■■□□ 2.53
LSM7-204ENST00000587502 NPM2Q86SE8 214 aaKnown RBP30.86■■■□□ 2.53
LSM7-204ENST00000587502 PNISRQ8TF01 805 aaKnown RBP30.85■■■□□ 2.53
LSM7-204ENST00000587502 SNRPA1P09661 255 aaKnown RBP30.84■■■□□ 2.53
LSM7-204ENST00000587502 IL6STP40189 918 aaPredicted RBP30.84■■■□□ 2.53
LSM7-204ENST00000587502 ZNF784Q8NCA9 323 aaPredicted RBP30.83■■■□□ 2.53
LSM7-204ENST00000587502 DDR1Q08345 913 aa30.82■■■□□ 2.52
LSM7-204ENST00000587502 PXDNLA1KZ92 1463 aa30.82■■■□□ 2.52
LSM7-204ENST00000587502 ZNF316A6NFI3 1004 aaPredicted RBP30.81■■■□□ 2.52
LSM7-204ENST00000587502 POLRMTO00411 1230 aaKnown RBP30.81■■■□□ 2.52
LSM7-204ENST00000587502 A1BGP04217 495 aa30.79■■■□□ 2.52
LSM7-204ENST00000587502 DLG5Q8TDM6 1919 aa30.79■■■□□ 2.52
LSM7-204ENST00000587502 A0A0G2JLW4 131 aa30.78■■■□□ 2.52
LSM7-204ENST00000587502 NFIXQ14938 502 aa30.78■■■□□ 2.52
LSM7-204ENST00000587502 USP16Q9Y5T5 823 aa30.78■■■□□ 2.52
LSM7-204ENST00000587502 BCL2L12Q9HB09 334 aa30.77■■■□□ 2.52
LSM7-204ENST00000587502 ZNF330Q9Y3S2 320 aaPredicted RBP30.77■■■□□ 2.52
LSM7-204ENST00000587502 DPEP1P16444 411 aa30.76■■■□□ 2.51
LSM7-204ENST00000587502 PRKRIP1Q9H875 184 aaPredicted RBP30.76■■■□□ 2.51
LSM7-204ENST00000587502 WWC3Q9ULE0 1092 aa30.76■■■□□ 2.51
LSM7-204ENST00000587502 WDR43Q15061 677 aaKnown RBP eCLIP30.75■■■□□ 2.51
LSM7-204ENST00000587502 LMOD3Q0VAK6 560 aa30.74■■■□□ 2.51
LSM7-204ENST00000587502 N4BP2Q86UW6 1770 aaPredicted RBP30.74■■■□□ 2.51
LSM7-204ENST00000587502 KIAA1551Q9HCM1 1747 aa30.73■■■□□ 2.51
LSM7-204ENST00000587502 RIPK4P57078 832 aa30.73■■■□□ 2.51
LSM7-204ENST00000587502 MIS18AQ9NYP9 233 aa30.73■■■□□ 2.51
LSM7-204ENST00000587502 TBC1D2BQ9UPU7 963 aa30.73■■■□□ 2.51
LSM7-204ENST00000587502 SERPINB2P05120 415 aa30.72■■■□□ 2.51
LSM7-204ENST00000587502 PIM2Q9P1W9 311 aa30.72■■■□□ 2.51
LSM7-204ENST00000587502 BCS1LQ9Y276 419 aa30.72■■■□□ 2.51
LSM7-204ENST00000587502 PRAMEF22A3QJZ6 481 aa30.71■■■□□ 2.51
LSM7-204ENST00000587502 KCNA3P22001 575 aa30.69■■■□□ 2.5
LSM7-204ENST00000587502 TMPOP42166 694 aaKnown RBP30.69■■■□□ 2.5
LSM7-204ENST00000587502 DZIP3Q86Y13 1208 aaKnown RBP30.69■■■□□ 2.5
LSM7-204ENST00000587502 THUMPD2Q9BTF0 503 aaKnown RBP30.69■■■□□ 2.5
LSM7-204ENST00000587502 CAMTA2O94983 1202 aa30.67■■■□□ 2.5
LSM7-204ENST00000587502 EIF4A1P60842 406 aaKnown RBP30.67■■■□□ 2.5
LSM7-204ENST00000587502 TBC1D9BQ66K14 1250 aa30.67■■■□□ 2.5
LSM7-204ENST00000587502 BICDL1Q6ZP65 573 aa30.67■■■□□ 2.5
LSM7-204ENST00000587502 RUNDC1Q96C34 613 aa30.67■■■□□ 2.5
LSM7-204ENST00000587502 BABAM1Q9NWV8 329 aa30.67■■■□□ 2.5
LSM7-204ENST00000587502 SCN7AQ01118 1682 aa30.67■■■□□ 2.5
LSM7-204ENST00000587502 NRXN2Q9P2S2 1712 aa30.67■■■□□ 2.5
LSM7-204ENST00000587502 DALRD3Q5D0E6 543 aaKnown RBP30.66■■■□□ 2.5
LSM7-204ENST00000587502 CLEC4GQ6UXB4 293 aa30.66■■■□□ 2.5
LSM7-204ENST00000587502 KDM3BQ7LBC6 1761 aa30.66■■■□□ 2.5
LSM7-204ENST00000587502 AFDNP55196 1824 aaKnown RBP30.66■■■□□ 2.5
LSM7-204ENST00000587502 RGL2O15211 777 aa30.65■■■□□ 2.5
LSM7-204ENST00000587502 GIGYF1O75420 1035 aaPredicted RBP30.65■■■□□ 2.5
LSM7-204ENST00000587502 SETDB2Q96T68 719 aa30.65■■■□□ 2.5
LSM7-204ENST00000587502 ZNF652Q9Y2D9 606 aa30.65■■■□□ 2.5
LSM7-204ENST00000587502 CARMIL3Q8ND23 1372 aa30.65■■■□□ 2.5
LSM7-204ENST00000587502 BRCA1P38398 1863 aaKnown RBP30.64■■■□□ 2.5
LSM7-204ENST00000587502 TSPYL4Q9UJ04 414 aa30.64■■■□□ 2.5
LSM7-204ENST00000587502 CHRNA5P30532 468 aa30.63■■■□□ 2.49
LSM7-204ENST00000587502 PIP4K2AP48426 406 aaPredicted RBP30.63■■■□□ 2.49
LSM7-204ENST00000587502 CCDC146Q8IYE0 955 aa30.63■■■□□ 2.49
LSM7-204ENST00000587502 ADAMTS8Q9UP79 889 aa30.63■■■□□ 2.49
LSM7-204ENST00000587502 PDZRN3Q9UPQ7 1066 aa30.63■■■□□ 2.49
LSM7-204ENST00000587502 NBPF26B4DH59 902 aa30.62■■■□□ 2.49
LSM7-204ENST00000587502 NBPF10Q6P3W6 841 aaKnown RBP30.62■■■□□ 2.49
LSM7-204ENST00000587502 NBPF15Q8N660 670 aa30.62■■■□□ 2.49
LSM7-204ENST00000587502 ARHGAP27Q6ZUM4 889 aa30.61■■■□□ 2.49
LSM7-204ENST00000587502 SENP3-EIF4A1A0A087X0R7 540 aa30.6■■■□□ 2.49
LSM7-204ENST00000587502 LAMB4A4D0S4 1761 aa30.6■■■□□ 2.49
LSM7-204ENST00000587502 NEUROD2Q15784 382 aa30.59■■■□□ 2.49
LSM7-204ENST00000587502 H0YIN7 160 aa30.58■■■□□ 2.49
LSM7-204ENST00000587502 NPHP1O15259 732 aa30.58■■■□□ 2.49
LSM7-204ENST00000587502 BRIP1Q9BX63 1249 aa30.58■■■□□ 2.49
LSM7-204ENST00000587502 RRP7AQ9Y3A4 280 aaKnown RBP30.58■■■□□ 2.49
LSM7-204ENST00000587502 ARFGEF1Q9Y6D6 1849 aa30.58■■■□□ 2.49
LSM7-204ENST00000587502 BCORQ6W2J9 1755 aa30.58■■■□□ 2.49
LSM7-204ENST00000587502 ATP10DQ9P241 1426 aa30.57■■■□□ 2.48
LSM7-204ENST00000587502 ADCY9O60503 1353 aa30.57■■■□□ 2.48
LSM7-204ENST00000587502 PDE6BP35913 854 aa30.57■■■□□ 2.48
LSM7-204ENST00000587502 ERBB4Q15303 1308 aa30.56■■■□□ 2.48
LSM7-204ENST00000587502 PRR5LQ6MZQ0 368 aa30.56■■■□□ 2.48
LSM7-204ENST00000587502 C2CD5Q86YS7 1000 aa30.56■■■□□ 2.48
LSM7-204ENST00000587502 CNBD1Q8NA66 436 aa30.56■■■□□ 2.48
LSM7-204ENST00000587502 ST5P78524 1137 aa30.55■■■□□ 2.48
LSM7-204ENST00000587502 IFFO2Q5TF58 517 aa30.54■■■□□ 2.48
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms