RNA–Protein interactions for RNA: ENST00000587165.1

LINC01140-208, Transcript of long intergenic non-protein coding RNA 1140, humanhuman

TSL 3

Gene LINC01140, Length 426 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01140-208ENST00000587165 INTS5Q6P9B9 1019 aaKnown RBP6.71□□□□□ -1.34
LINC01140-208ENST00000587165 SMIM5Q71RC9 77 aa6.71□□□□□ -1.34
LINC01140-208ENST00000587165 NLGN2Q8NFZ4 835 aa6.71□□□□□ -1.34
LINC01140-208ENST00000587165 RUNDC1Q96C34 613 aa6.71□□□□□ -1.34
LINC01140-208ENST00000587165 NARFQ9UHQ1 456 aa6.71□□□□□ -1.34
LINC01140-208ENST00000587165 ZBTB1Q9Y2K1 713 aa6.71□□□□□ -1.34
LINC01140-208ENST00000587165 TUBGCP6Q96RT7 1819 aa6.71□□□□□ -1.34
LINC01140-208ENST00000587165 UBR3Q6ZT12 1888 aa6.7□□□□□ -1.34
LINC01140-208ENST00000587165 TGFB2P61812 414 aa6.7□□□□□ -1.34
LINC01140-208ENST00000587165 CALD1Q05682 793 aaKnown RBP6.7□□□□□ -1.34
LINC01140-208ENST00000587165 DCTN1Q14203 1278 aa6.7□□□□□ -1.34
LINC01140-208ENST00000587165 USPL1Q5W0Q7 1092 aa6.7□□□□□ -1.34
LINC01140-208ENST00000587165 PLEKHF1Q96S99 279 aa6.7□□□□□ -1.34
LINC01140-208ENST00000587165 SRP68Q9UHB9 627 aaKnown RBP6.7□□□□□ -1.34
LINC01140-208ENST00000587165 TSPYL4Q9UJ04 414 aa6.7□□□□□ -1.34
LINC01140-208ENST00000587165 ZNF652Q9Y2D9 606 aa6.7□□□□□ -1.34
LINC01140-208ENST00000587165 ADAMTS7Q9UKP4 1686 aa6.7□□□□□ -1.34
LINC01140-208ENST00000587165 CICQ96RK0 1608 aaPredicted RBP6.69□□□□□ -1.34
LINC01140-208ENST00000587165 TMPOP42166 694 aaKnown RBP6.69□□□□□ -1.34
LINC01140-208ENST00000587165 EIF5P55010 431 aaKnown RBP6.69□□□□□ -1.34
LINC01140-208ENST00000587165 FKBP8Q14318 412 aa6.69□□□□□ -1.34
LINC01140-208ENST00000587165 NEUROD2Q15784 382 aa6.69□□□□□ -1.34
LINC01140-208ENST00000587165 DZIP3Q86Y13 1208 aaKnown RBP6.69□□□□□ -1.34
LINC01140-208ENST00000587165 BABAM1Q9NWV8 329 aa6.69□□□□□ -1.34
LINC01140-208ENST00000587165 C10orf71Q711Q0 1435 aa6.68□□□□□ -1.34
LINC01140-208ENST00000587165 KCNQ3O43525 872 aa6.68□□□□□ -1.34
LINC01140-208ENST00000587165 A1BGP04217 495 aa6.68□□□□□ -1.34
LINC01140-208ENST00000587165 KIF6Q6ZMV9 814 aa6.68□□□□□ -1.34
LINC01140-208ENST00000587165 BICDL1Q6ZP65 573 aa6.68□□□□□ -1.34
LINC01140-208ENST00000587165 CCDC146Q8IYE0 955 aa6.68□□□□□ -1.34
LINC01140-208ENST00000587165 PDZRN3Q9UPQ7 1066 aa6.68□□□□□ -1.34
LINC01140-208ENST00000587165 RRP7AQ9Y3A4 280 aaKnown RBP6.68□□□□□ -1.34
LINC01140-208ENST00000587165 CARMIL3Q8ND23 1372 aa6.68□□□□□ -1.34
LINC01140-208ENST00000587165 COL5A3P25940 1745 aaPredicted RBP6.67□□□□□ -1.34
LINC01140-208ENST00000587165 TJP1Q07157 1748 aa6.67□□□□□ -1.34
LINC01140-208ENST00000587165 POLRMTO00411 1230 aaKnown RBP6.67□□□□□ -1.34
LINC01140-208ENST00000587165 RGL2O15211 777 aa6.67□□□□□ -1.34
LINC01140-208ENST00000587165 SERPINB2P05120 415 aa6.67□□□□□ -1.34
LINC01140-208ENST00000587165 ST5P78524 1137 aa6.67□□□□□ -1.34
LINC01140-208ENST00000587165 DDR1Q08345 913 aa6.67□□□□□ -1.34
LINC01140-208ENST00000587165 NFIXQ14938 502 aa6.67□□□□□ -1.34
LINC01140-208ENST00000587165 CLEC4GQ6UXB4 293 aa6.67□□□□□ -1.34
LINC01140-208ENST00000587165 SETDB2Q96T68 719 aa6.67□□□□□ -1.34
LINC01140-208ENST00000587165 THUMPD2Q9BTF0 503 aaKnown RBP6.67□□□□□ -1.34
LINC01140-208ENST00000587165 CHMP4AQ9BY43 222 aa6.67□□□□□ -1.34
LINC01140-208ENST00000587165 MIS18AQ9NYP9 233 aa6.67□□□□□ -1.34
LINC01140-208ENST00000587165 PIM2Q9P1W9 311 aa6.67□□□□□ -1.34
LINC01140-208ENST00000587165 ADAMTS8Q9UP79 889 aa6.67□□□□□ -1.34
LINC01140-208ENST00000587165 TBC1D2BQ9UPU7 963 aa6.67□□□□□ -1.34
LINC01140-208ENST00000587165 BCS1LQ9Y276 419 aa6.67□□□□□ -1.34
LINC01140-208ENST00000587165 USP16Q9Y5T5 823 aa6.67□□□□□ -1.34
LINC01140-208ENST00000587165 ERBB4Q15303 1308 aa6.67□□□□□ -1.34
LINC01140-208ENST00000587165 COL24A1Q17RW2 1714 aa6.67□□□□□ -1.34
LINC01140-208ENST00000587165 A0A0G2JLW4 131 aa6.66□□□□□ -1.34
LINC01140-208ENST00000587165 GIGYF1O75420 1035 aaPredicted RBP6.66□□□□□ -1.34
LINC01140-208ENST00000587165 DPEP1P16444 411 aa6.66□□□□□ -1.34
LINC01140-208ENST00000587165 YBX3P16989 372 aaKnown RBP eCLIP6.66□□□□□ -1.34
LINC01140-208ENST00000587165 TM4SF1P30408 202 aa6.66□□□□□ -1.34
LINC01140-208ENST00000587165 PDE6BP35913 854 aa6.66□□□□□ -1.34
LINC01140-208ENST00000587165 EIF4A1P60842 406 aaKnown RBP6.66□□□□□ -1.34
LINC01140-208ENST00000587165 DALRD3Q5D0E6 543 aaKnown RBP6.66□□□□□ -1.34
LINC01140-208ENST00000587165 NBPF5PQ86XG9 351 aaPredicted RBP6.66□□□□□ -1.34
LINC01140-208ENST00000587165 CNBD1Q8NA66 436 aa6.66□□□□□ -1.34
LINC01140-208ENST00000587165 MRS2Q9HD23 443 aa6.66□□□□□ -1.34
LINC01140-208ENST00000587165 WWC3Q9ULE0 1092 aa6.66□□□□□ -1.34
LINC01140-208ENST00000587165 LAS1LQ9Y4W2 734 aaKnown RBP6.66□□□□□ -1.34
LINC01140-208ENST00000587165 UBR2Q8IWV8 1755 aa6.66□□□□□ -1.34
LINC01140-208ENST00000587165 PXDNLA1KZ92 1463 aa6.66□□□□□ -1.34
LINC01140-208ENST00000587165 MYH14Q7Z406 1995 aaKnown RBP6.66□□□□□ -1.34
LINC01140-208ENST00000587165 C4AP0C0L4 1744 aa6.65□□□□□ -1.34
LINC01140-208ENST00000587165 H0YIN7 160 aa6.65□□□□□ -1.34
LINC01140-208ENST00000587165 CAMTA2O94983 1202 aa6.65□□□□□ -1.34
LINC01140-208ENST00000587165 GTF2E1P29083 439 aaPredicted RBP6.65□□□□□ -1.34
LINC01140-208ENST00000587165 GNAI1P63096 354 aa6.65□□□□□ -1.34
LINC01140-208ENST00000587165 TBC1D9BQ66K14 1250 aa6.65□□□□□ -1.34
LINC01140-208ENST00000587165 PRAMEF22A3QJZ6 481 aa6.64□□□□□ -1.35
LINC01140-208ENST00000587165 APAF1O14727 1248 aa6.64□□□□□ -1.35
LINC01140-208ENST00000587165 HOXB7P09629 217 aa6.64□□□□□ -1.35
LINC01140-208ENST00000587165 MYL6BP14649 208 aa6.64□□□□□ -1.35
LINC01140-208ENST00000587165 EIF2S2P20042 333 aaKnown RBP6.64□□□□□ -1.35
LINC01140-208ENST00000587165 PIP4K2AP48426 406 aaPredicted RBP6.64□□□□□ -1.35
LINC01140-208ENST00000587165 TPTE2Q6XPS3 522 aa6.64□□□□□ -1.35
LINC01140-208ENST00000587165 ARHGAP27Q6ZUM4 889 aa6.64□□□□□ -1.35
LINC01140-208ENST00000587165 C2CD5Q86YS7 1000 aa6.64□□□□□ -1.35
LINC01140-208ENST00000587165 NGEFQ8N5V2 710 aa6.64□□□□□ -1.35
LINC01140-208ENST00000587165 TTLL6Q8N841 843 aa6.64□□□□□ -1.35
LINC01140-208ENST00000587165 CFAP44Q96MT7 982 aa6.64□□□□□ -1.35
LINC01140-208ENST00000587165 BRIP1Q9BX63 1249 aa6.64□□□□□ -1.35
LINC01140-208ENST00000587165 NYXQ9GZU5 481 aa6.64□□□□□ -1.35
LINC01140-208ENST00000587165 BCL2L12Q9HB09 334 aa6.64□□□□□ -1.35
LINC01140-208ENST00000587165 IFT57Q9NWB7 429 aa6.64□□□□□ -1.35
LINC01140-208ENST00000587165 NIP7Q9Y221 180 aaKnown RBP eCLIP6.64□□□□□ -1.35
LINC01140-208ENST00000587165 SIPA1L3O60292 1781 aaPredicted RBP6.64□□□□□ -1.35
LINC01140-208ENST00000587165 NBPF26B4DH59 902 aa6.63□□□□□ -1.35
LINC01140-208ENST00000587165 ERVV-1B6SEH8 477 aa6.63□□□□□ -1.35
LINC01140-208ENST00000587165 CHL1O00533 1208 aa6.63□□□□□ -1.35
LINC01140-208ENST00000587165 CHRNA5P30532 468 aa6.63□□□□□ -1.35
LINC01140-208ENST00000587165 HSP90AB3PQ58FF7 597 aa6.63□□□□□ -1.35
LINC01140-208ENST00000587165 SOGA3Q5TF21 947 aa6.63□□□□□ -1.35
LINC01140-208ENST00000587165 HDGFL1Q5TGJ6 251 aa6.63□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 117.5 ms