RNA–Protein interactions for RNA: ENST00000586975.1

CLPTM1-206, Transcript of CLPTM1, transmembrane protein, humanhuman

TSL 2

Gene CLPTM1, Length 720 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-206ENST00000586975 C4AP0C0L4 1744 aa25.31■■□□□ 1.64
CLPTM1-206ENST00000586975 A0A0G2JLW4 131 aa25.3■■□□□ 1.64
CLPTM1-206ENST00000586975 ZNF330Q9Y3S2 320 aaPredicted RBP25.3■■□□□ 1.64
CLPTM1-206ENST00000586975 COL15A1P39059 1388 aa25.3■■□□□ 1.64
CLPTM1-206ENST00000586975 RALBP1Q15311 655 aa25.29■■□□□ 1.64
CLPTM1-206ENST00000586975 TEX13AQ9BXU3 409 aaPredicted RBP25.29■■□□□ 1.64
CLPTM1-206ENST00000586975 CHD4Q14839 1912 aa25.29■■□□□ 1.64
CLPTM1-206ENST00000586975 TGFB2P61812 414 aa25.28■■□□□ 1.64
CLPTM1-206ENST00000586975 DDR1Q08345 913 aa25.28■■□□□ 1.64
CLPTM1-206ENST00000586975 NARFQ9UHQ1 456 aa25.28■■□□□ 1.64
CLPTM1-206ENST00000586975 C10orf71Q711Q0 1435 aa25.27■■□□□ 1.64
CLPTM1-206ENST00000586975 DPEP1P16444 411 aa25.26■■□□□ 1.63
CLPTM1-206ENST00000586975 PXDNLA1KZ92 1463 aa25.26■■□□□ 1.63
CLPTM1-206ENST00000586975 UBR2Q8IWV8 1755 aa25.26■■□□□ 1.63
CLPTM1-206ENST00000586975 HTATSF1O43719 755 aaKnown RBP25.25■■□□□ 1.63
CLPTM1-206ENST00000586975 BCS1LQ9Y276 419 aa25.25■■□□□ 1.63
CLPTM1-206ENST00000586975 TM4SF1P30408 202 aa25.24■■□□□ 1.63
CLPTM1-206ENST00000586975 NPM2Q86SE8 214 aaKnown RBP25.24■■□□□ 1.63
CLPTM1-206ENST00000586975 MAPK8IP3Q9UPT6 1336 aa25.23■■□□□ 1.63
CLPTM1-206ENST00000586975 A0A087WZG4 1122 aa25.23■■□□□ 1.63
CLPTM1-206ENST00000586975 POLRMTO00411 1230 aaKnown RBP25.23■■□□□ 1.63
CLPTM1-206ENST00000586975 A1BGP04217 495 aa25.23■■□□□ 1.63
CLPTM1-206ENST00000586975 EIF5P55010 431 aaKnown RBP25.23■■□□□ 1.63
CLPTM1-206ENST00000586975 NFIXQ14938 502 aa25.23■■□□□ 1.63
CLPTM1-206ENST00000586975 PNNQ9H307 717 aaKnown RBP25.23■■□□□ 1.63
CLPTM1-206ENST00000586975 SIPA1L3O60292 1781 aaPredicted RBP25.23■■□□□ 1.63
CLPTM1-206ENST00000586975 BICDL1Q6ZP65 573 aa25.22■■□□□ 1.63
CLPTM1-206ENST00000586975 PLEKHF1Q96S99 279 aa25.22■■□□□ 1.63
CLPTM1-206ENST00000586975 MIS18AQ9NYP9 233 aa25.22■■□□□ 1.63
CLPTM1-206ENST00000586975 TAF7Q15545 349 aaPredicted RBP25.21■■□□□ 1.63
CLPTM1-206ENST00000586975 BCL2L12Q9HB09 334 aa25.21■■□□□ 1.63
CLPTM1-206ENST00000586975 TBC1D2BQ9UPU7 963 aa25.21■■□□□ 1.63
CLPTM1-206ENST00000586975 PRAMEF22A3QJZ6 481 aa25.2■■□□□ 1.62
CLPTM1-206ENST00000586975 NFE2L2Q16236 605 aa25.2■■□□□ 1.62
CLPTM1-206ENST00000586975 USP16Q9Y5T5 823 aa25.2■■□□□ 1.62
CLPTM1-206ENST00000586975 SNRPA1P09661 255 aaKnown RBP25.19■■□□□ 1.62
CLPTM1-206ENST00000586975 IL6STP40189 918 aaPredicted RBP25.19■■□□□ 1.62
CLPTM1-206ENST00000586975 PIP4K2AP48426 406 aaPredicted RBP25.19■■□□□ 1.62
CLPTM1-206ENST00000586975 THUMPD2Q9BTF0 503 aaKnown RBP25.18■■□□□ 1.62
CLPTM1-206ENST00000586975 N4BP2Q86UW6 1770 aaPredicted RBP25.18■■□□□ 1.62
CLPTM1-206ENST00000586975 MYBBP1AQ9BQG0 1328 aaKnown RBP25.17■■□□□ 1.62
CLPTM1-206ENST00000586975 SERPINB2P05120 415 aa25.17■■□□□ 1.62
CLPTM1-206ENST00000586975 CHRNA5P30532 468 aa25.17■■□□□ 1.62
CLPTM1-206ENST00000586975 KCNA3P22001 575 aa25.16■■□□□ 1.62
CLPTM1-206ENST00000586975 ARHGAP27Q6ZUM4 889 aa25.16■■□□□ 1.62
CLPTM1-206ENST00000586975 PIM2Q9P1W9 311 aa25.16■■□□□ 1.62
CLPTM1-206ENST00000586975 KIF13BQ9NQT8 1826 aa25.16■■□□□ 1.62
CLPTM1-206ENST00000586975 TBC1D9BQ66K14 1250 aa25.14■■□□□ 1.62
CLPTM1-206ENST00000586975 KIAA1551Q9HCM1 1747 aa25.13■■□□□ 1.61
CLPTM1-206ENST00000586975 DALRD3Q5D0E6 543 aaKnown RBP25.13■■□□□ 1.61
CLPTM1-206ENST00000586975 PNISRQ8TF01 805 aaKnown RBP25.13■■□□□ 1.61
CLPTM1-206ENST00000586975 ZNF526Q8TF50 670 aaPredicted RBP25.13■■□□□ 1.61
CLPTM1-206ENST00000586975 ATP10DQ9P241 1426 aa25.12■■□□□ 1.61
CLPTM1-206ENST00000586975 DZIP3Q86Y13 1208 aaKnown RBP25.12■■□□□ 1.61
CLPTM1-206ENST00000586975 GIGYF1O75420 1035 aaPredicted RBP25.11■■□□□ 1.61
CLPTM1-206ENST00000586975 RIPK4P57078 832 aa25.11■■□□□ 1.61
CLPTM1-206ENST00000586975 CCDC146Q8IYE0 955 aa25.11■■□□□ 1.61
CLPTM1-206ENST00000586975 CAMTA2O94983 1202 aa25.1■■□□□ 1.61
CLPTM1-206ENST00000586975 WDR43Q15061 677 aaKnown RBP eCLIP25.1■■□□□ 1.61
CLPTM1-206ENST00000586975 NPHP1O15259 732 aa25.09■■□□□ 1.61
CLPTM1-206ENST00000586975 CCDC24Q8N4L8 307 aa25.09■■□□□ 1.61
CLPTM1-206ENST00000586975 NEUROD2Q15784 382 aa25.08■■□□□ 1.61
CLPTM1-206ENST00000586975 SETDB2Q96T68 719 aa25.08■■□□□ 1.61
CLPTM1-206ENST00000586975 GPBP1L1Q9HC44 474 aaPredicted RBP25.08■■□□□ 1.61
CLPTM1-206ENST00000586975 RRP7AQ9Y3A4 280 aaKnown RBP25.08■■□□□ 1.61
CLPTM1-206ENST00000586975 NBPF26B4DH59 902 aa25.07■■□□□ 1.6
CLPTM1-206ENST00000586975 NBPF10Q6P3W6 841 aaKnown RBP25.07■■□□□ 1.6
CLPTM1-206ENST00000586975 C2CD5Q86YS7 1000 aa25.07■■□□□ 1.6
CLPTM1-206ENST00000586975 NBPF15Q8N660 670 aa25.07■■□□□ 1.6
CLPTM1-206ENST00000586975 DLG5Q8TDM6 1919 aa25.06■■□□□ 1.6
CLPTM1-206ENST00000586975 ZEB1P37275 1124 aaPredicted RBP25.06■■□□□ 1.6
CLPTM1-206ENST00000586975 TMPOP42166 694 aaKnown RBP25.06■■□□□ 1.6
CLPTM1-206ENST00000586975 EIF4A1P60842 406 aaKnown RBP25.06■■□□□ 1.6
CLPTM1-206ENST00000586975 NGEFQ8N5V2 710 aa25.06■■□□□ 1.6
CLPTM1-206ENST00000586975 PRKRIP1Q9H875 184 aaPredicted RBP25.06■■□□□ 1.6
CLPTM1-206ENST00000586975 TSPYL4Q9UJ04 414 aa25.06■■□□□ 1.6
CLPTM1-206ENST00000586975 CARMIL3Q8ND23 1372 aa25.05■■□□□ 1.6
CLPTM1-206ENST00000586975 H0YIN7 160 aa25.05■■□□□ 1.6
CLPTM1-206ENST00000586975 C1QTNF8P60827 252 aa25.05■■□□□ 1.6
CLPTM1-206ENST00000586975 ZNF652Q9Y2D9 606 aa25.04■■□□□ 1.6
CLPTM1-206ENST00000586975 ADCY9O60503 1353 aa25.04■■□□□ 1.6
CLPTM1-206ENST00000586975 AFDNP55196 1824 aaKnown RBP25.03■■□□□ 1.6
CLPTM1-206ENST00000586975 LMOD3Q0VAK6 560 aa25.03■■□□□ 1.6
CLPTM1-206ENST00000586975 PRR5LQ6MZQ0 368 aa25.03■■□□□ 1.6
CLPTM1-206ENST00000586975 SCN7AQ01118 1682 aa25.03■■□□□ 1.6
CLPTM1-206ENST00000586975 CNBD1Q8NA66 436 aa25.02■■□□□ 1.6
CLPTM1-206ENST00000586975 ADAMTS8Q9UP79 889 aa25.02■■□□□ 1.6
CLPTM1-206ENST00000586975 ZNF622Q969S3 477 aaKnown RBP eCLIP25.01■■□□□ 1.59
CLPTM1-206ENST00000586975 RUNDC1Q96C34 613 aa25.01■■□□□ 1.59
CLPTM1-206ENST00000586975 PDE6BP35913 854 aa25■■□□□ 1.59
CLPTM1-206ENST00000586975 ST5P78524 1137 aa25■■□□□ 1.59
CLPTM1-206ENST00000586975 C9orf131Q5VYM1 1079 aa25■■□□□ 1.59
CLPTM1-206ENST00000586975 TTLL6Q8N841 843 aa25■■□□□ 1.59
CLPTM1-206ENST00000586975 BRIP1Q9BX63 1249 aa25■■□□□ 1.59
CLPTM1-206ENST00000586975 NRXN2Q9P2S2 1712 aa25■■□□□ 1.59
CLPTM1-206ENST00000586975 FAM177BA6PVY3 158 aa24.99■■□□□ 1.59
CLPTM1-206ENST00000586975 MYL6BP14649 208 aa24.99■■□□□ 1.59
CLPTM1-206ENST00000586975 BRCA1P38398 1863 aaKnown RBP24.99■■□□□ 1.59
CLPTM1-206ENST00000586975 CLEC4GQ6UXB4 293 aa24.99■■□□□ 1.59
CLPTM1-206ENST00000586975 NBPF5PQ86XG9 351 aaPredicted RBP24.99■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms