RNA–Protein interactions for RNA: ENST00000586870.5

RETREG3-205, Transcript of reticulophagy regulator family member 3, humanhuman

TSL 2

Gene RETREG3, Length 1,632 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-205ENST00000586870 MBIPQ9NS73 344 aa23.54■■□□□ 1.36
RETREG3-205ENST00000586870 CEMIPQ8WUJ3 1361 aa23.54■■□□□ 1.36
RETREG3-205ENST00000586870 VAMP4O75379 141 aa23.53■■□□□ 1.36
RETREG3-205ENST00000586870 TNNQ9UQP3 1299 aa23.53■■□□□ 1.36
RETREG3-205ENST00000586870 MVPQ14764 893 aaKnown RBP23.52■■□□□ 1.36
RETREG3-205ENST00000586870 SLC15A2Q16348 729 aa23.52■■□□□ 1.36
RETREG3-205ENST00000586870 ATF7IPQ6VMQ6 1270 aa23.52■■□□□ 1.36
RETREG3-205ENST00000586870 FTSJ3Q8IY81 847 aaKnown RBP23.52■■□□□ 1.36
RETREG3-205ENST00000586870 ITGB4P16144 1822 aa23.52■■□□□ 1.36
RETREG3-205ENST00000586870 TAF7Q15545 349 aaPredicted RBP23.51■■□□□ 1.35
RETREG3-205ENST00000586870 RGPD3A6NKT7 1758 aaPredicted RBP23.51■■□□□ 1.35
RETREG3-205ENST00000586870 RGPD4Q7Z3J3 1758 aa23.51■■□□□ 1.35
RETREG3-205ENST00000586870 ANO8Q9HCE9 1232 aaPredicted RBP23.51■■□□□ 1.35
RETREG3-205ENST00000586870 NOB1Q9ULX3 412 aaKnown RBP23.51■■□□□ 1.35
RETREG3-205ENST00000586870 TFCP2L1Q9NZI6 479 aa23.5■■□□□ 1.35
RETREG3-205ENST00000586870 TRIM27P14373 513 aa23.49■■□□□ 1.35
RETREG3-205ENST00000586870 ZNF790Q6PG37 636 aa23.49■■□□□ 1.35
RETREG3-205ENST00000586870 SCN11AQ9UI33 1791 aa23.49■■□□□ 1.35
RETREG3-205ENST00000586870 MRC1P22897 1456 aa23.48■■□□□ 1.35
RETREG3-205ENST00000586870 AK7Q96M32 723 aa23.48■■□□□ 1.35
RETREG3-205ENST00000586870 CHL1O00533 1208 aa23.47■■□□□ 1.35
RETREG3-205ENST00000586870 ITPK1Q13572 414 aa23.47■■□□□ 1.35
RETREG3-205ENST00000586870 TWISTNBQ3B726 338 aaPredicted RBP23.47■■□□□ 1.35
RETREG3-205ENST00000586870 ARHGAP45Q92619 1136 aa23.47■■□□□ 1.35
RETREG3-205ENST00000586870 DDX19BQ9UMR2 479 aa23.47■■□□□ 1.35
RETREG3-205ENST00000586870 RREB1Q92766 1687 aa23.47■■□□□ 1.35
RETREG3-205ENST00000586870 IGHDP01880 384 aa23.46■■□□□ 1.35
RETREG3-205ENST00000586870 ZNF827Q17R98 1081 aa23.46■■□□□ 1.35
RETREG3-205ENST00000586870 MRPL50Q8N5N7 158 aaKnown RBP23.46■■□□□ 1.35
RETREG3-205ENST00000586870 AKT1S1Q96B36 256 aa23.46■■□□□ 1.35
RETREG3-205ENST00000586870 MIS18AQ9NYP9 233 aa23.46■■□□□ 1.35
RETREG3-205ENST00000586870 TSPYL6Q8N831 410 aa23.45■■□□□ 1.34
RETREG3-205ENST00000586870 FMNL2Q96PY5 1086 aa23.45■■□□□ 1.34
RETREG3-205ENST00000586870 SLC4A9Q96Q91 983 aa23.45■■□□□ 1.34
RETREG3-205ENST00000586870 LINC00116Q8NCU8 138 aa23.44■■□□□ 1.34
RETREG3-205ENST00000586870 NUP188Q5SRE5 1749 aa23.44■■□□□ 1.34
RETREG3-205ENST00000586870 MSH5O43196 834 aa23.44■■□□□ 1.34
RETREG3-205ENST00000586870 C8orf58Q8NAV2 365 aa23.44■■□□□ 1.34
RETREG3-205ENST00000586870 ADAMTS7Q9UKP4 1686 aa23.44■■□□□ 1.34
RETREG3-205ENST00000586870 KCNQ3O43525 872 aa23.43■■□□□ 1.34
RETREG3-205ENST00000586870 PDE4AP27815 886 aa23.43■■□□□ 1.34
RETREG3-205ENST00000586870 VSIG10Q8N0Z9 540 aa23.43■■□□□ 1.34
RETREG3-205ENST00000586870 ZNF496Q96IT1 587 aaPredicted RBP23.43■■□□□ 1.34
RETREG3-205ENST00000586870 TSPYL4Q9UJ04 414 aa23.42■■□□□ 1.34
RETREG3-205ENST00000586870 LY75O60449 1722 aa23.42■■□□□ 1.34
RETREG3-205ENST00000586870 DNAJC10Q8IXB1 793 aa23.41■■□□□ 1.34
RETREG3-205ENST00000586870 TEX13AQ9BXU3 409 aaPredicted RBP23.41■■□□□ 1.34
RETREG3-205ENST00000586870 RWDD1Q9H446 243 aaPredicted RBP23.41■■□□□ 1.34
RETREG3-205ENST00000586870 PCDHB15Q9Y5E8 787 aa23.41■■□□□ 1.34
RETREG3-205ENST00000586870 GNPATO15228 680 aa23.41■■□□□ 1.34
RETREG3-205ENST00000586870 BACH2Q9BYV9 841 aa23.41■■□□□ 1.34
RETREG3-205ENST00000586870 STARD3NLO95772 234 aa23.4■■□□□ 1.34
RETREG3-205ENST00000586870 ITPRIPQ8IWB1 547 aa23.4■■□□□ 1.34
RETREG3-205ENST00000586870 TMEM57Q8N5G2 664 aa23.4■■□□□ 1.34
RETREG3-205ENST00000586870 FLAD1Q8NFF5 587 aa23.4■■□□□ 1.34
RETREG3-205ENST00000586870 ELL2O00472 640 aaPredicted RBP23.39■■□□□ 1.33
RETREG3-205ENST00000586870 PHF14O94880 888 aa23.39■■□□□ 1.33
RETREG3-205ENST00000586870 CHMP4BQ9H444 224 aaKnown RBP23.39■■□□□ 1.33
RETREG3-205ENST00000586870 HEG1Q9ULI3 1381 aa23.38■■□□□ 1.33
RETREG3-205ENST00000586870 RC3H1Q5TC82 1133 aaKnown RBP23.38■■□□□ 1.33
RETREG3-205ENST00000586870 BABAM1Q9NWV8 329 aa23.38■■□□□ 1.33
RETREG3-205ENST00000586870 RTCBQ9Y3I0 505 aaKnown RBP23.38■■□□□ 1.33
RETREG3-205ENST00000586870 SNRPA1P09661 255 aaKnown RBP23.37■■□□□ 1.33
RETREG3-205ENST00000586870 CRKLP46109 303 aaKnown RBP23.37■■□□□ 1.33
RETREG3-205ENST00000586870 SKAP1Q86WV1 359 aa23.37■■□□□ 1.33
RETREG3-205ENST00000586870 API5Q9BZZ5 524 aaKnown RBP23.37■■□□□ 1.33
RETREG3-205ENST00000586870 SRCAPQ6ZRS2 3230 aa23.36■■□□□ 1.33
RETREG3-205ENST00000586870 CNTNAP4Q9C0A0 1308 aa23.36■■□□□ 1.33
RETREG3-205ENST00000586870 PNPLA7Q6ZV29 1317 aa23.35■■□□□ 1.33
RETREG3-205ENST00000586870 CYP19A1P11511 503 aaPredicted RBP23.35■■□□□ 1.33
RETREG3-205ENST00000586870 PDGFDQ9GZP0 370 aaPredicted RBP23.35■■□□□ 1.33
RETREG3-205ENST00000586870 CCDC87Q9NVE4 849 aa23.35■■□□□ 1.33
RETREG3-205ENST00000586870 KCPQ6ZWJ8 1503 aa23.35■■□□□ 1.33
RETREG3-205ENST00000586870 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP23.34■■□□□ 1.33
RETREG3-205ENST00000586870 TRAPPC3LQ5T215 181 aa23.34■■□□□ 1.33
RETREG3-205ENST00000586870 ZBTB40Q9NUA8 1239 aa23.34■■□□□ 1.33
RETREG3-205ENST00000586870 PAPPAQ13219 1627 aa23.34■■□□□ 1.33
RETREG3-205ENST00000586870 RPS6KA4O75676 772 aa23.33■■□□□ 1.33
RETREG3-205ENST00000586870 ZBTB7AO95365 584 aa23.33■■□□□ 1.33
RETREG3-205ENST00000586870 SSFA2P28290 1259 aa23.33■■□□□ 1.33
RETREG3-205ENST00000586870 NPM2Q86SE8 214 aaKnown RBP23.33■■□□□ 1.33
RETREG3-205ENST00000586870 COL23A1Q86Y22 540 aaPredicted RBP23.33■■□□□ 1.33
RETREG3-205ENST00000586870 EIF4A1P60842 406 aaKnown RBP23.33■■□□□ 1.32
RETREG3-205ENST00000586870 HDAC1Q13547 482 aaPredicted RBP23.33■■□□□ 1.32
RETREG3-205ENST00000586870 ABCC4O15439 1325 aa23.32■■□□□ 1.32
RETREG3-205ENST00000586870 SMIM5Q71RC9 77 aa23.32■■□□□ 1.32
RETREG3-205ENST00000586870 SLC16A10Q8TF71 515 aa23.32■■□□□ 1.32
RETREG3-205ENST00000586870 VIRMAQ69YN4 1812 aaKnown RBP23.32■■□□□ 1.32
RETREG3-205ENST00000586870 C5P01031 1676 aa23.32■■□□□ 1.32
RETREG3-205ENST00000586870 INTS5Q6P9B9 1019 aaKnown RBP23.31■■□□□ 1.32
RETREG3-205ENST00000586870 SPON1Q9HCB6 807 aa23.31■■□□□ 1.32
RETREG3-205ENST00000586870 USP16Q9Y5T5 823 aa23.31■■□□□ 1.32
RETREG3-205ENST00000586870 C4BP0C0L5 1744 aa23.31■■□□□ 1.32
RETREG3-205ENST00000586870 RGS3P49796 1198 aa23.3■■□□□ 1.32
RETREG3-205ENST00000586870 ATF5Q9Y2D1 282 aaPredicted RBP23.3■■□□□ 1.32
RETREG3-205ENST00000586870 PRAMEF22A3QJZ6 481 aa23.3■■□□□ 1.32
RETREG3-205ENST00000586870 RFC4P35249 363 aa23.3■■□□□ 1.32
RETREG3-205ENST00000586870 MTFR1LQ9H019 292 aa23.3■■□□□ 1.32
RETREG3-205ENST00000586870 ZNF330Q9Y3S2 320 aaPredicted RBP23.3■■□□□ 1.32
RETREG3-205ENST00000586870 SIPA1L3O60292 1781 aaPredicted RBP23.29■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms