RNA–Protein interactions for RNA: ENST00000586709.1

LAMA3-205, Transcript of laminin subunit alpha 3, humanhuman

TSL 3

Gene LAMA3, Length 637 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMA3-205ENST00000586709 FHDC1Q9C0D6 1143 aaPredicted RBP13.34□□□□□ -0.27
LAMA3-205ENST00000586709 KCPQ6ZWJ8 1503 aa13.34□□□□□ -0.27
LAMA3-205ENST00000586709 CHD4Q14839 1912 aa13.33□□□□□ -0.28
LAMA3-205ENST00000586709 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.33□□□□□ -0.28
LAMA3-205ENST00000586709 GNPATO15228 680 aa13.33□□□□□ -0.28
LAMA3-205ENST00000586709 PTCD1O75127 700 aaKnown RBP13.33□□□□□ -0.28
LAMA3-205ENST00000586709 PHF14O94880 888 aa13.33□□□□□ -0.28
LAMA3-205ENST00000586709 GNAT3A8MTJ3 354 aa13.32□□□□□ -0.28
LAMA3-205ENST00000586709 ZEB1P37275 1124 aaPredicted RBP13.32□□□□□ -0.28
LAMA3-205ENST00000586709 MSL1Q68DK7 614 aa13.32□□□□□ -0.28
LAMA3-205ENST00000586709 SYT17Q9BSW7 474 aa13.32□□□□□ -0.28
LAMA3-205ENST00000586709 PCDH10Q9P2E7 1040 aa13.32□□□□□ -0.28
LAMA3-205ENST00000586709 CNTNAP4Q9C0A0 1308 aa13.32□□□□□ -0.28
LAMA3-205ENST00000586709 FCHSD2O94868 740 aa13.31□□□□□ -0.28
LAMA3-205ENST00000586709 RALBP1Q15311 655 aa13.31□□□□□ -0.28
LAMA3-205ENST00000586709 RC3H1Q5TC82 1133 aaKnown RBP13.31□□□□□ -0.28
LAMA3-205ENST00000586709 POTEGQ6S5H5 508 aa13.31□□□□□ -0.28
LAMA3-205ENST00000586709 SMIM5Q71RC9 77 aa13.31□□□□□ -0.28
LAMA3-205ENST00000586709 PHACTR3Q96KR7 559 aa13.31□□□□□ -0.28
LAMA3-205ENST00000586709 POTEB2H3BUK9 544 aa13.3□□□□□ -0.28
LAMA3-205ENST00000586709 SLC39A6Q13433 755 aa13.3□□□□□ -0.28
LAMA3-205ENST00000586709 RTCBQ9Y3I0 505 aaKnown RBP13.3□□□□□ -0.28
LAMA3-205ENST00000586709 TEFQ10587 303 aa13.29□□□□□ -0.28
LAMA3-205ENST00000586709 IL17REQ8NFR9 667 aa13.29□□□□□ -0.28
LAMA3-205ENST00000586709 CREBZFQ9NS37 354 aa13.29□□□□□ -0.28
LAMA3-205ENST00000586709 KIF13BQ9NQT8 1826 aa13.29□□□□□ -0.28
LAMA3-205ENST00000586709 CEMIPQ8WUJ3 1361 aa13.29□□□□□ -0.28
LAMA3-205ENST00000586709 KLHL34Q8N239 644 aa13.28□□□□□ -0.28
LAMA3-205ENST00000586709 RPS6KA4O75676 772 aa13.27□□□□□ -0.29
LAMA3-205ENST00000586709 CRKLP46109 303 aaKnown RBP13.27□□□□□ -0.29
LAMA3-205ENST00000586709 TRAPPC3LQ5T215 181 aa13.27□□□□□ -0.29
LAMA3-205ENST00000586709 KDM3BQ7LBC6 1761 aa13.26□□□□□ -0.29
LAMA3-205ENST00000586709 DNAJC10Q8IXB1 793 aa13.26□□□□□ -0.29
LAMA3-205ENST00000586709 TTC5Q8N0Z6 440 aa13.26□□□□□ -0.29
LAMA3-205ENST00000586709 VSIG10Q8N0Z9 540 aa13.26□□□□□ -0.29
LAMA3-205ENST00000586709 MYBBP1AQ9BQG0 1328 aaKnown RBP13.26□□□□□ -0.29
LAMA3-205ENST00000586709 NEFMP07197 916 aa13.25□□□□□ -0.29
LAMA3-205ENST00000586709 ZNF790Q6PG37 636 aa13.25□□□□□ -0.29
LAMA3-205ENST00000586709 RTF1Q92541 710 aaKnown RBP13.25□□□□□ -0.29
LAMA3-205ENST00000586709 ARHGEF1Q92888 912 aaKnown RBP13.25□□□□□ -0.29
LAMA3-205ENST00000586709 CYP19A1P11511 503 aaPredicted RBP13.24□□□□□ -0.29
LAMA3-205ENST00000586709 RFC4P35249 363 aa13.24□□□□□ -0.29
LAMA3-205ENST00000586709 INTS5Q6P9B9 1019 aaKnown RBP13.24□□□□□ -0.29
LAMA3-205ENST00000586709 NLGN2Q8NFZ4 835 aa13.24□□□□□ -0.29
LAMA3-205ENST00000586709 PLEKHF1Q96S99 279 aa13.24□□□□□ -0.29
LAMA3-205ENST00000586709 CCDC87Q9NVE4 849 aa13.24□□□□□ -0.29
LAMA3-205ENST00000586709 LAMB4A4D0S4 1761 aa13.24□□□□□ -0.29
LAMA3-205ENST00000586709 N4BP2Q86UW6 1770 aaPredicted RBP13.24□□□□□ -0.29
LAMA3-205ENST00000586709 KIAA1551Q9HCM1 1747 aa13.24□□□□□ -0.29
LAMA3-205ENST00000586709 HEG1Q9ULI3 1381 aa13.23□□□□□ -0.29
LAMA3-205ENST00000586709 AFDNP55196 1824 aaKnown RBP13.23□□□□□ -0.29
LAMA3-205ENST00000586709 HTATSF1O43719 755 aaKnown RBP13.23□□□□□ -0.29
LAMA3-205ENST00000586709 MCM10Q7L590 875 aa13.23□□□□□ -0.29
LAMA3-205ENST00000586709 PNNQ9H307 717 aaKnown RBP13.23□□□□□ -0.29
LAMA3-205ENST00000586709 SCN7AQ01118 1682 aa13.22□□□□□ -0.29
LAMA3-205ENST00000586709 SOS1Q07889 1333 aaPredicted RBP13.22□□□□□ -0.29
LAMA3-205ENST00000586709 MAPK8IP3Q9UPT6 1336 aa13.22□□□□□ -0.29
LAMA3-205ENST00000586709 BTBD11A6QL63 1104 aa13.22□□□□□ -0.29
LAMA3-205ENST00000586709 GYS1P13807 737 aa13.22□□□□□ -0.29
LAMA3-205ENST00000586709 NLGN1Q8N2Q7 840 aa13.22□□□□□ -0.29
LAMA3-205ENST00000586709 ZNF496Q96IT1 587 aaPredicted RBP13.22□□□□□ -0.29
LAMA3-205ENST00000586709 CD2APQ9Y5K6 639 aa13.22□□□□□ -0.29
LAMA3-205ENST00000586709 BRCA1P38398 1863 aaKnown RBP13.22□□□□□ -0.29
LAMA3-205ENST00000586709 COL15A1P39059 1388 aa13.21□□□□□ -0.29
LAMA3-205ENST00000586709 USP42Q9H9J4 1324 aaKnown RBP13.21□□□□□ -0.29
LAMA3-205ENST00000586709 STARD3NLO95772 234 aa13.21□□□□□ -0.29
LAMA3-205ENST00000586709 MMP10P09238 476 aa13.21□□□□□ -0.29
LAMA3-205ENST00000586709 DCTN1Q14203 1278 aa13.21□□□□□ -0.29
LAMA3-205ENST00000586709 NFE2L2Q16236 605 aa13.21□□□□□ -0.29
LAMA3-205ENST00000586709 FMNL2Q96PY5 1086 aa13.21□□□□□ -0.29
LAMA3-205ENST00000586709 PRKRIP1Q9H875 184 aaPredicted RBP13.21□□□□□ -0.29
LAMA3-205ENST00000586709 ZBTB1Q9Y2K1 713 aa13.21□□□□□ -0.29
LAMA3-205ENST00000586709 BCORQ6W2J9 1755 aa13.21□□□□□ -0.29
LAMA3-205ENST00000586709 KCNQ3O43525 872 aa13.2□□□□□ -0.3
LAMA3-205ENST00000586709 TEX13AQ9BXU3 409 aaPredicted RBP13.2□□□□□ -0.3
LAMA3-205ENST00000586709 SRP68Q9UHB9 627 aaKnown RBP13.2□□□□□ -0.3
LAMA3-205ENST00000586709 GPR162Q16538 588 aa13.19□□□□□ -0.3
LAMA3-205ENST00000586709 NRXN2Q9P2S2 1712 aa13.19□□□□□ -0.3
LAMA3-205ENST00000586709 ZPR1O75312 459 aa13.18□□□□□ -0.3
LAMA3-205ENST00000586709 YY1P25490 414 aa13.18□□□□□ -0.3
LAMA3-205ENST00000586709 PELP1Q8IZL8 1130 aaKnown RBP13.18□□□□□ -0.3
LAMA3-205ENST00000586709 C10orf71Q711Q0 1435 aa13.18□□□□□ -0.3
LAMA3-205ENST00000586709 CANXP27824 592 aaKnown RBP13.17□□□□□ -0.3
LAMA3-205ENST00000586709 FKBP8Q14318 412 aa13.17□□□□□ -0.3
LAMA3-205ENST00000586709 WDR43Q15061 677 aaKnown RBP eCLIP13.17□□□□□ -0.3
LAMA3-205ENST00000586709 TAF7Q15545 349 aaPredicted RBP13.17□□□□□ -0.3
LAMA3-205ENST00000586709 USPL1Q5W0Q7 1092 aa13.17□□□□□ -0.3
LAMA3-205ENST00000586709 NARFQ9UHQ1 456 aa13.17□□□□□ -0.3
LAMA3-205ENST00000586709 PARP3Q9Y6F1 533 aa13.17□□□□□ -0.3
LAMA3-205ENST00000586709 ARFGEF1Q9Y6D6 1849 aa13.17□□□□□ -0.3
LAMA3-205ENST00000586709 EIF5P55010 431 aaKnown RBP13.16□□□□□ -0.3
LAMA3-205ENST00000586709 PHF12Q96QT6 1004 aa13.16□□□□□ -0.3
LAMA3-205ENST00000586709 PXDNLA1KZ92 1463 aa13.16□□□□□ -0.3
LAMA3-205ENST00000586709 DLEC1Q9Y238 1755 aa13.15□□□□□ -0.3
LAMA3-205ENST00000586709 A0A087WZG4 1122 aa13.15□□□□□ -0.3
LAMA3-205ENST00000586709 ZNF316A6NFI3 1004 aaPredicted RBP13.15□□□□□ -0.3
LAMA3-205ENST00000586709 YBX3P16989 372 aaKnown RBP eCLIP13.15□□□□□ -0.3
LAMA3-205ENST00000586709 PNISRQ8TF01 805 aaKnown RBP13.15□□□□□ -0.3
LAMA3-205ENST00000586709 PRAMEF22A3QJZ6 481 aa13.14□□□□□ -0.31
LAMA3-205ENST00000586709 A1BGP04217 495 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 64.5 ms