RNA–Protein interactions for RNA: ENST00000586499.5

TPM4-204, Transcript of tropomyosin 4, humanhuman

TSL 4

Gene TPM4, Length 708 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-204ENST00000586499 PNNQ9H307 717 aaKnown RBP25.24■■□□□ 1.63
TPM4-204ENST00000586499 GOLGB1Q14789 3259 aaKnown RBP25.24■■□□□ 1.63
TPM4-204ENST00000586499 MAPK8IP3Q9UPT6 1336 aa25.23■■□□□ 1.63
TPM4-204ENST00000586499 STARD3NLO95772 234 aa25.23■■□□□ 1.63
TPM4-204ENST00000586499 FKBP8Q14318 412 aa25.23■■□□□ 1.63
TPM4-204ENST00000586499 MIS18AQ9NYP9 233 aa25.23■■□□□ 1.63
TPM4-204ENST00000586499 THUMPD2Q9BTF0 503 aaKnown RBP25.22■■□□□ 1.63
TPM4-204ENST00000586499 TAF7Q15545 349 aaPredicted RBP25.21■■□□□ 1.63
TPM4-204ENST00000586499 PRAMEF22A3QJZ6 481 aa25.2■■□□□ 1.62
TPM4-204ENST00000586499 YY1P25490 414 aa25.2■■□□□ 1.62
TPM4-204ENST00000586499 USPL1Q5W0Q7 1092 aa25.2■■□□□ 1.62
TPM4-204ENST00000586499 TEX13AQ9BXU3 409 aaPredicted RBP25.2■■□□□ 1.62
TPM4-204ENST00000586499 COL15A1P39059 1388 aa25.19■■□□□ 1.62
TPM4-204ENST00000586499 ZPR1O75312 459 aa25.19■■□□□ 1.62
TPM4-204ENST00000586499 A1BGP04217 495 aa25.19■■□□□ 1.62
TPM4-204ENST00000586499 CCDC146Q8IYE0 955 aa25.19■■□□□ 1.62
TPM4-204ENST00000586499 ZNF316A6NFI3 1004 aaPredicted RBP25.18■■□□□ 1.62
TPM4-204ENST00000586499 YBX3P16989 372 aaKnown RBP eCLIP25.18■■□□□ 1.62
TPM4-204ENST00000586499 WWC3Q9ULE0 1092 aa25.18■■□□□ 1.62
TPM4-204ENST00000586499 USP16Q9Y5T5 823 aa25.18■■□□□ 1.62
TPM4-204ENST00000586499 EIF5P55010 431 aaKnown RBP25.17■■□□□ 1.62
TPM4-204ENST00000586499 NARFQ9UHQ1 456 aa25.17■■□□□ 1.62
TPM4-204ENST00000586499 PARP3Q9Y6F1 533 aa25.17■■□□□ 1.62
TPM4-204ENST00000586499 RIPK4P57078 832 aa25.16■■□□□ 1.62
TPM4-204ENST00000586499 DDR1Q08345 913 aa25.16■■□□□ 1.62
TPM4-204ENST00000586499 WDR43Q15061 677 aaKnown RBP eCLIP25.16■■□□□ 1.621e-6■□□□□ 11.1
TPM4-204ENST00000586499 ADAMTS8Q9UP79 889 aa25.16■■□□□ 1.62
TPM4-204ENST00000586499 BCL2L12Q9HB09 334 aa25.15■■□□□ 1.62
TPM4-204ENST00000586499 ZNF330Q9Y3S2 320 aaPredicted RBP25.15■■□□□ 1.62
TPM4-204ENST00000586499 SNRPA1P09661 255 aaKnown RBP25.14■■□□□ 1.62
TPM4-204ENST00000586499 TM4SF1P30408 202 aa25.14■■□□□ 1.62
TPM4-204ENST00000586499 TMPOP42166 694 aaKnown RBP25.14■■□□□ 1.62
TPM4-204ENST00000586499 PIP4K2AP48426 406 aaPredicted RBP25.14■■□□□ 1.62
TPM4-204ENST00000586499 RRP7AQ9Y3A4 280 aaKnown RBP25.14■■□□□ 1.62
TPM4-204ENST00000586499 NEUROD2Q15784 382 aa25.12■■□□□ 1.61
TPM4-204ENST00000586499 IL6STP40189 918 aaPredicted RBP25.11■■□□□ 1.61
TPM4-204ENST00000586499 TBC1D2BQ9UPU7 963 aa25.11■■□□□ 1.61
TPM4-204ENST00000586499 C10orf71Q711Q0 1435 aa25.11■■□□□ 1.61
TPM4-204ENST00000586499 POLRMTO00411 1230 aaKnown RBP25.1■■□□□ 1.61
TPM4-204ENST00000586499 NFIXQ14938 502 aa25.1■■□□□ 1.61
TPM4-204ENST00000586499 PNISRQ8TF01 805 aaKnown RBP25.1■■□□□ 1.61
TPM4-204ENST00000586499 RUNDC1Q96C34 613 aa25.1■■□□□ 1.61
TPM4-204ENST00000586499 A0A087WZG4 1122 aa25.09■■□□□ 1.61
TPM4-204ENST00000586499 A0A0G2JLW4 131 aa25.09■■□□□ 1.61
TPM4-204ENST00000586499 CCDC184Q52MB2 194 aa25.09■■□□□ 1.61
TPM4-204ENST00000586499 KIF13BQ9NQT8 1826 aa25.09■■□□□ 1.61
TPM4-204ENST00000586499 PXDNLA1KZ92 1463 aa25.09■■□□□ 1.61
TPM4-204ENST00000586499 EIF4A1P60842 406 aaKnown RBP25.08■■□□□ 1.61
TPM4-204ENST00000586499 KDM3BQ7LBC6 1761 aa25.08■■□□□ 1.6
TPM4-204ENST00000586499 KIAA1551Q9HCM1 1747 aa25.07■■□□□ 1.6
TPM4-204ENST00000586499 GRIN3BO60391 1043 aa25.07■■□□□ 1.6
TPM4-204ENST00000586499 TGFB2P61812 414 aa25.07■■□□□ 1.6
TPM4-204ENST00000586499 BICDL1Q6ZP65 573 aa25.07■■□□□ 1.6
TPM4-204ENST00000586499 N4BP2Q86UW6 1770 aaPredicted RBP25.07■■□□□ 1.6
TPM4-204ENST00000586499 NBPF26B4DH59 902 aa25.06■■□□□ 1.6
TPM4-204ENST00000586499 DPEP1P16444 411 aa25.06■■□□□ 1.6
TPM4-204ENST00000586499 NBPF10Q6P3W6 841 aaKnown RBP25.06■■□□□ 1.6
TPM4-204ENST00000586499 NBPF15Q8N660 670 aa25.06■■□□□ 1.6
TPM4-204ENST00000586499 CHD4Q14839 1912 aa25.06■■□□□ 1.6
TPM4-204ENST00000586499 GIGYF1O75420 1035 aaPredicted RBP25.05■■□□□ 1.6
TPM4-204ENST00000586499 NPM2Q86SE8 214 aaKnown RBP25.05■■□□□ 1.6
TPM4-204ENST00000586499 TBC1D9BQ66K14 1250 aa25.04■■□□□ 1.6
TPM4-204ENST00000586499 TSPYL4Q9UJ04 414 aa25.04■■□□□ 1.6
TPM4-204ENST00000586499 TRIM35Q9UPQ4 493 aa25.04■■□□□ 1.6
TPM4-204ENST00000586499 CAMTA2O94983 1202 aa25.03■■□□□ 1.6
TPM4-204ENST00000586499 SERPINB2P05120 415 aa25.03■■□□□ 1.6
TPM4-204ENST00000586499 LMOD3Q0VAK6 560 aa25.03■■□□□ 1.6
TPM4-204ENST00000586499 DZIP3Q86Y13 1208 aaKnown RBP25.03■■□□□ 1.6
TPM4-204ENST00000586499 KCNA3P22001 575 aa25.02■■□□□ 1.6
TPM4-204ENST00000586499 AFDNP55196 1824 aaKnown RBP25.01■■□□□ 1.59
TPM4-204ENST00000586499 CHRNA5P30532 468 aa25■■□□□ 1.59
TPM4-204ENST00000586499 SCN7AQ01118 1682 aa25■■□□□ 1.59
TPM4-204ENST00000586499 BCS1LQ9Y276 419 aa24.99■■□□□ 1.59
TPM4-204ENST00000586499 APAF1O14727 1248 aa24.98■■□□□ 1.59
TPM4-204ENST00000586499 NGEFQ8N5V2 710 aa24.98■■□□□ 1.59
TPM4-204ENST00000586499 LAMB4A4D0S4 1761 aa24.98■■□□□ 1.59
TPM4-204ENST00000586499 ZNF784Q8NCA9 323 aaPredicted RBP24.97■■□□□ 1.59
TPM4-204ENST00000586499 LAS1LQ9Y4W2 734 aaKnown RBP24.97■■□□□ 1.59
TPM4-204ENST00000586499 NRXN2Q9P2S2 1712 aa24.97■■□□□ 1.59
TPM4-204ENST00000586499 ANP32CO43423 234 aa24.96■■□□□ 1.59
TPM4-204ENST00000586499 CCDC24Q8N4L8 307 aa24.96■■□□□ 1.59
TPM4-204ENST00000586499 BABAM1Q9NWV8 329 aa24.96■■□□□ 1.59
TPM4-204ENST00000586499 CARMIL3Q8ND23 1372 aa24.95■■□□□ 1.59
TPM4-204ENST00000586499 BCORQ6W2J9 1755 aa24.95■■□□□ 1.58
TPM4-204ENST00000586499 CHL1O00533 1208 aa24.94■■□□□ 1.58
TPM4-204ENST00000586499 MYL6BP14649 208 aa24.94■■□□□ 1.58
TPM4-204ENST00000586499 SETDB2Q96T68 719 aa24.94■■□□□ 1.58
TPM4-204ENST00000586499 PIM2Q9P1W9 311 aa24.94■■□□□ 1.58
TPM4-204ENST00000586499 SENP3-EIF4A1A0A087X0R7 540 aa24.93■■□□□ 1.58
TPM4-204ENST00000586499 EIF2S2P20042 333 aaKnown RBP24.93■■□□□ 1.58
TPM4-204ENST00000586499 KRT24Q2M2I5 525 aa24.93■■□□□ 1.58
TPM4-204ENST00000586499 BRCA1P38398 1863 aaKnown RBP24.93■■□□□ 1.58
TPM4-204ENST00000586499 HLFQ16534 295 aa24.92■■□□□ 1.58
TPM4-204ENST00000586499 PRR5LQ6MZQ0 368 aa24.92■■□□□ 1.58
TPM4-204ENST00000586499 CLEC4GQ6UXB4 293 aa24.91■■□□□ 1.58
TPM4-204ENST00000586499 TTLL7Q6ZT98 887 aa24.91■■□□□ 1.58
TPM4-204ENST00000586499 MRS2Q9HD23 443 aa24.91■■□□□ 1.58
TPM4-204ENST00000586499 DALRD3Q5D0E6 543 aaKnown RBP24.9■■□□□ 1.58
TPM4-204ENST00000586499 NECTIN2Q92692 538 aa24.9■■□□□ 1.58
TPM4-204ENST00000586499 ZNF652Q9Y2D9 606 aa24.9■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms