RNA–Protein interactions for RNA: ENST00000586477.1

ATG4D-205, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 5

Gene ATG4D, Length 628 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-205ENST00000586477 CCDC146Q8IYE0 955 aa21.13■□□□□ 0.97
ATG4D-205ENST00000586477 ZNF496Q96IT1 587 aaPredicted RBP21.13■□□□□ 0.97
ATG4D-205ENST00000586477 ZNF790Q6PG37 636 aa21.12■□□□□ 0.97
ATG4D-205ENST00000586477 MCM10Q7L590 875 aa21.12■□□□□ 0.97
ATG4D-205ENST00000586477 VSIG10Q8N0Z9 540 aa21.12■□□□□ 0.97
ATG4D-205ENST00000586477 CCDC87Q9NVE4 849 aa21.12■□□□□ 0.97
ATG4D-205ENST00000586477 SRP68Q9UHB9 627 aaKnown RBP21.12■□□□□ 0.97
ATG4D-205ENST00000586477 CD2APQ9Y5K6 639 aa21.12■□□□□ 0.97
ATG4D-205ENST00000586477 SOS1Q07889 1333 aaPredicted RBP21.11■□□□□ 0.97
ATG4D-205ENST00000586477 MMP10P09238 476 aa21.11■□□□□ 0.97
ATG4D-205ENST00000586477 DCTN1Q14203 1278 aa21.11■□□□□ 0.97
ATG4D-205ENST00000586477 NFE2L2Q16236 605 aa21.11■□□□□ 0.97
ATG4D-205ENST00000586477 USP42Q9H9J4 1324 aaKnown RBP21.1■□□□□ 0.97
ATG4D-205ENST00000586477 YBX3P16989 372 aaKnown RBP eCLIP21.1■□□□□ 0.97
ATG4D-205ENST00000586477 RFC4P35249 363 aa21.1■□□□□ 0.97
ATG4D-205ENST00000586477 ZBTB1Q9Y2K1 713 aa21.1■□□□□ 0.97
ATG4D-205ENST00000586477 HEG1Q9ULI3 1381 aa21.1■□□□□ 0.97
ATG4D-205ENST00000586477 HTATSF1O43719 755 aaKnown RBP21.09■□□□□ 0.97
ATG4D-205ENST00000586477 APAF1O14727 1248 aa21.08■□□□□ 0.97
ATG4D-205ENST00000586477 TMPOP42166 694 aaKnown RBP21.08■□□□□ 0.97
ATG4D-205ENST00000586477 NLGN1Q8N2Q7 840 aa21.08■□□□□ 0.97
ATG4D-205ENST00000586477 ZNF784Q8NCA9 323 aaPredicted RBP21.08■□□□□ 0.97
ATG4D-205ENST00000586477 RTF1Q92541 710 aaKnown RBP21.08■□□□□ 0.97
ATG4D-205ENST00000586477 FKBP8Q14318 412 aa21.07■□□□□ 0.96
ATG4D-205ENST00000586477 TTC5Q8N0Z6 440 aa21.07■□□□□ 0.96
ATG4D-205ENST00000586477 N4BP2Q86UW6 1770 aaPredicted RBP21.06■□□□□ 0.96
ATG4D-205ENST00000586477 BTBD11A6QL63 1104 aa21.06■□□□□ 0.96
ATG4D-205ENST00000586477 COL15A1P39059 1388 aa21.06■□□□□ 0.96
ATG4D-205ENST00000586477 C10orf71Q711Q0 1435 aa21.05■□□□□ 0.96
ATG4D-205ENST00000586477 RIPK4P57078 832 aa21.05■□□□□ 0.96
ATG4D-205ENST00000586477 CALD1Q05682 793 aaKnown RBP21.05■□□□□ 0.96
ATG4D-205ENST00000586477 DDR1Q08345 913 aa21.05■□□□□ 0.96
ATG4D-205ENST00000586477 CCDC27Q2M243 656 aa21.04■□□□□ 0.96
ATG4D-205ENST00000586477 BCL2L12Q9HB09 334 aa21.04■□□□□ 0.96
ATG4D-205ENST00000586477 PXDNLA1KZ92 1463 aa21.04■□□□□ 0.96
ATG4D-205ENST00000586477 KDM3BQ7LBC6 1761 aa21.04■□□□□ 0.96
ATG4D-205ENST00000586477 PRAMEF22A3QJZ6 481 aa21.03■□□□□ 0.96
ATG4D-205ENST00000586477 GRIN3BO60391 1043 aa21.03■□□□□ 0.96
ATG4D-205ENST00000586477 USPL1Q5W0Q7 1092 aa21.03■□□□□ 0.96
ATG4D-205ENST00000586477 FMNL2Q96PY5 1086 aa21.03■□□□□ 0.96
ATG4D-205ENST00000586477 AFDNP55196 1824 aaKnown RBP21.03■□□□□ 0.96
ATG4D-205ENST00000586477 CANXP27824 592 aaKnown RBP21.02■□□□□ 0.96
ATG4D-205ENST00000586477 TM4SF1P30408 202 aa21.02■□□□□ 0.96
ATG4D-205ENST00000586477 EIF5P55010 431 aaKnown RBP21.02■□□□□ 0.96
ATG4D-205ENST00000586477 NARFQ9UHQ1 456 aa21.02■□□□□ 0.96
ATG4D-205ENST00000586477 BRCA1P38398 1863 aaKnown RBP21.02■□□□□ 0.96
ATG4D-205ENST00000586477 HNRNPUQ00839 825 aaKnown RBP eCLIP21.01■□□□□ 0.95
ATG4D-205ENST00000586477 NEUROD2Q15784 382 aa21.01■□□□□ 0.95
ATG4D-205ENST00000586477 THUMPD2Q9BTF0 503 aaKnown RBP21.01■□□□□ 0.95
ATG4D-205ENST00000586477 NRXN2Q9P2S2 1712 aa21.01■□□□□ 0.95
ATG4D-205ENST00000586477 SCN7AQ01118 1682 aa21■□□□□ 0.95
ATG4D-205ENST00000586477 STARD3NLO95772 234 aa21■□□□□ 0.95
ATG4D-205ENST00000586477 MIS18AQ9NYP9 233 aa21■□□□□ 0.95
ATG4D-205ENST00000586477 USP16Q9Y5T5 823 aa21■□□□□ 0.95
ATG4D-205ENST00000586477 POLRMTO00411 1230 aaKnown RBP20.99■□□□□ 0.95
ATG4D-205ENST00000586477 A1BGP04217 495 aa20.99■□□□□ 0.95
ATG4D-205ENST00000586477 TAF7Q15545 349 aaPredicted RBP20.99■□□□□ 0.95
ATG4D-205ENST00000586477 TEX13AQ9BXU3 409 aaPredicted RBP20.99■□□□□ 0.95
ATG4D-205ENST00000586477 WWC3Q9ULE0 1092 aa20.99■□□□□ 0.95
ATG4D-205ENST00000586477 RRP7AQ9Y3A4 280 aaKnown RBP20.99■□□□□ 0.95
ATG4D-205ENST00000586477 ZPR1O75312 459 aa20.98■□□□□ 0.95
ATG4D-205ENST00000586477 PARP3Q9Y6F1 533 aa20.98■□□□□ 0.95
ATG4D-205ENST00000586477 LAMB4A4D0S4 1761 aa20.97■□□□□ 0.95
ATG4D-205ENST00000586477 BCORQ6W2J9 1755 aa20.97■□□□□ 0.95
ATG4D-205ENST00000586477 A0A0G2JLW4 131 aa20.96■□□□□ 0.95
ATG4D-205ENST00000586477 PIP4K2AP48426 406 aaPredicted RBP20.96■□□□□ 0.95
ATG4D-205ENST00000586477 NFIXQ14938 502 aa20.96■□□□□ 0.95
ATG4D-205ENST00000586477 KCNA3P22001 575 aa20.95■□□□□ 0.94
ATG4D-205ENST00000586477 IL6STP40189 918 aaPredicted RBP20.95■□□□□ 0.94
ATG4D-205ENST00000586477 WDR63Q8IWG1 891 aa20.95■□□□□ 0.94
ATG4D-205ENST00000586477 WWC1Q8IX03 1113 aa20.95■□□□□ 0.94
ATG4D-205ENST00000586477 TRIM35Q9UPQ4 493 aa20.95■□□□□ 0.94
ATG4D-205ENST00000586477 ZBED9Q6R2W3 1325 aa20.95■□□□□ 0.94
ATG4D-205ENST00000586477 SNRPA1P09661 255 aaKnown RBP20.94■□□□□ 0.94
ATG4D-205ENST00000586477 DPEP1P16444 411 aa20.94■□□□□ 0.94
ATG4D-205ENST00000586477 TGFB2P61812 414 aa20.94■□□□□ 0.94
ATG4D-205ENST00000586477 IL16Q14005 1332 aa20.94■□□□□ 0.94
ATG4D-205ENST00000586477 NBPF26B4DH59 902 aa20.93■□□□□ 0.94
ATG4D-205ENST00000586477 NBPF10Q6P3W6 841 aaKnown RBP20.93■□□□□ 0.94
ATG4D-205ENST00000586477 NBPF15Q8N660 670 aa20.93■□□□□ 0.94
ATG4D-205ENST00000586477 TBC1D2BQ9UPU7 963 aa20.93■□□□□ 0.94
ATG4D-205ENST00000586477 A0A087WZG4 1122 aa20.92■□□□□ 0.94
ATG4D-205ENST00000586477 BABAM1Q9NWV8 329 aa20.92■□□□□ 0.94
ATG4D-205ENST00000586477 SALL2Q9Y467 1007 aaPredicted RBP20.92■□□□□ 0.94
ATG4D-205ENST00000586477 CAMTA2O94983 1202 aa20.91■□□□□ 0.94
ATG4D-205ENST00000586477 ANKRD31Q8N7Z5 1873 aa20.91■□□□□ 0.94
ATG4D-205ENST00000586477 ARFGEF1Q9Y6D6 1849 aa20.9■□□□□ 0.94
ATG4D-205ENST00000586477 EIF4A1P60842 406 aaKnown RBP20.9■□□□□ 0.94
ATG4D-205ENST00000586477 TBC1D9BQ66K14 1250 aa20.9■□□□□ 0.94
ATG4D-205ENST00000586477 ZNF330Q9Y3S2 320 aaPredicted RBP20.9■□□□□ 0.94
ATG4D-205ENST00000586477 CARMIL3Q8ND23 1372 aa20.89■□□□□ 0.93
ATG4D-205ENST00000586477 ZNF521Q96K83 1311 aa20.89■□□□□ 0.93
ATG4D-205ENST00000586477 SERPINB2P05120 415 aa20.89■□□□□ 0.93
ATG4D-205ENST00000586477 GNAI1P63096 354 aa20.89■□□□□ 0.93
ATG4D-205ENST00000586477 GOLGA2Q08379 1002 aa20.89■□□□□ 0.93
ATG4D-205ENST00000586477 DLEC1Q9Y238 1755 aa20.89■□□□□ 0.93
ATG4D-205ENST00000586477 GIGYF1O75420 1035 aaPredicted RBP20.88■□□□□ 0.93
ATG4D-205ENST00000586477 CHRNA5P30532 468 aa20.88■□□□□ 0.93
ATG4D-205ENST00000586477 IFT57Q9NWB7 429 aa20.88■□□□□ 0.93
ATG4D-205ENST00000586477 C1QTNF8P60827 252 aa20.87■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms