RNA–Protein interactions for RNA: ENST00000586242.1

GRN-204, Transcript of granulin precursor, humanhuman

TSL 3

Gene GRN, Length 665 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GRN-204ENST00000586242 TSPYL6Q8N831 410 aa20.11■□□□□ 0.81
GRN-204ENST00000586242 ATG3Q9NT62 314 aa20.11■□□□□ 0.81
GRN-204ENST00000586242 PTCD1O75127 700 aaKnown RBP20.1■□□□□ 0.81
GRN-204ENST00000586242 CT47B1P0C2W7 299 aaPredicted RBP20.1■□□□□ 0.81
GRN-204ENST00000586242 KLHL34Q8N239 644 aa20.1■□□□□ 0.81
GRN-204ENST00000586242 RBM42Q9BTD8 480 aaKnown RBP20.1■□□□□ 0.81
GRN-204ENST00000586242 RCAN3Q9UKA8 241 aa20.1■□□□□ 0.81
GRN-204ENST00000586242 ZNF496Q96IT1 587 aaPredicted RBP20.09■□□□□ 0.81
GRN-204ENST00000586242 DCAF8L1A6NGE4 600 aa20.08■□□□□ 0.81
GRN-204ENST00000586242 VAMP4O75379 141 aa20.08■□□□□ 0.81
GRN-204ENST00000586242 NLGN2Q8NFZ4 835 aa20.08■□□□□ 0.81
GRN-204ENST00000586242 SMARCC1Q92922 1105 aaPredicted RBP20.08■□□□□ 0.81
GRN-204ENST00000586242 CCNL1Q9UK58 526 aaPredicted RBP20.08■□□□□ 0.81
GRN-204ENST00000586242 SMIM5Q71RC9 77 aa20.07■□□□□ 0.8
GRN-204ENST00000586242 ZNF784Q8NCA9 323 aaPredicted RBP20.07■□□□□ 0.8
GRN-204ENST00000586242 TFCP2L1Q9NZI6 479 aa20.07■□□□□ 0.8
GRN-204ENST00000586242 GOLGB1Q14789 3259 aaKnown RBP20.07■□□□□ 0.8
GRN-204ENST00000586242 GIGYF1O75420 1035 aaPredicted RBP20.06■□□□□ 0.8
GRN-204ENST00000586242 SNRPA1P09661 255 aaKnown RBP20.06■□□□□ 0.8
GRN-204ENST00000586242 EIF2S2P20042 333 aaKnown RBP20.06■□□□□ 0.8
GRN-204ENST00000586242 MSL1Q68DK7 614 aa20.06■□□□□ 0.8
GRN-204ENST00000586242 AMIGO3Q86WK7 504 aa20.06■□□□□ 0.8
GRN-204ENST00000586242 COL23A1Q86Y22 540 aaPredicted RBP20.06■□□□□ 0.8
GRN-204ENST00000586242 NECTIN2Q92692 538 aa20.06■□□□□ 0.8
GRN-204ENST00000586242 SOS1Q07889 1333 aaPredicted RBP20.05■□□□□ 0.8
GRN-204ENST00000586242 HEG1Q9ULI3 1381 aa20.05■□□□□ 0.8
GRN-204ENST00000586242 UBR2Q8IWV8 1755 aa20.04■□□□□ 0.8
GRN-204ENST00000586242 KCPQ6ZWJ8 1503 aa20.04■□□□□ 0.8
GRN-204ENST00000586242 TCERG1O14776 1098 aaKnown RBP20.04■□□□□ 0.8
GRN-204ENST00000586242 HOXB7P09629 217 aa20.04■□□□□ 0.8
GRN-204ENST00000586242 HDGFL1Q5TGJ6 251 aa20.04■□□□□ 0.8
GRN-204ENST00000586242 ZNF428Q96B54 188 aa20.04■□□□□ 0.8
GRN-204ENST00000586242 CHMP4AQ9BY43 222 aa20.04■□□□□ 0.8
GRN-204ENST00000586242 UBR3Q6ZT12 1888 aa20.04■□□□□ 0.8
GRN-204ENST00000586242 PALLDQ8WX93 1383 aa20.04■□□□□ 0.8
GRN-204ENST00000586242 C4BP0C0L5 1744 aa20.03■□□□□ 0.8
GRN-204ENST00000586242 PRAMEF22A3QJZ6 481 aa20.03■□□□□ 0.8
GRN-204ENST00000586242 RARSP54136 660 aaKnown RBP20.03■□□□□ 0.8
GRN-204ENST00000586242 CCDC30Q5VVM6 783 aa20.03■□□□□ 0.8
GRN-204ENST00000586242 BCL2L13Q9BXK5 485 aa20.03■□□□□ 0.8
GRN-204ENST00000586242 SMC4Q9NTJ3 1288 aa20.03■□□□□ 0.8
GRN-204ENST00000586242 STK31Q9BXU1 1019 aa20.02■□□□□ 0.8
GRN-204ENST00000586242 ALDH1L2Q3SY69 923 aa20.01■□□□□ 0.79
GRN-204ENST00000586242 PELP1Q8IZL8 1130 aaKnown RBP20.01■□□□□ 0.79
GRN-204ENST00000586242 VSIG10Q8N0Z9 540 aa20.01■□□□□ 0.79
GRN-204ENST00000586242 SLC16A10Q8TF71 515 aa20.01■□□□□ 0.79
GRN-204ENST00000586242 SSH1Q8WYL5 1049 aa20.01■□□□□ 0.79
GRN-204ENST00000586242 TEX13AQ9BXU3 409 aaPredicted RBP20.01■□□□□ 0.79
GRN-204ENST00000586242 SUPT16HQ9Y5B9 1047 aaKnown RBP20.01■□□□□ 0.79
GRN-204ENST00000586242 LOC102724428A0A0B4J2F2 783 aa20■□□□□ 0.79
GRN-204ENST00000586242 BCAR3O75815 825 aa20■□□□□ 0.79
GRN-204ENST00000586242 ATP6V1AP38606 617 aa20■□□□□ 0.79
GRN-204ENST00000586242 SIK1P57059 783 aa20■□□□□ 0.79
GRN-204ENST00000586242 DNAJC10Q8IXB1 793 aa20■□□□□ 0.79
GRN-204ENST00000586242 USP16Q9Y5T5 823 aa20■□□□□ 0.79
GRN-204ENST00000586242 MSH5O43196 834 aa19.99■□□□□ 0.79
GRN-204ENST00000586242 STARD3NLO95772 234 aa19.98■□□□□ 0.79
GRN-204ENST00000586242 CANXP27824 592 aaKnown RBP19.98■□□□□ 0.79
GRN-204ENST00000586242 POLD1P28340 1107 aa19.98■□□□□ 0.79
GRN-204ENST00000586242 GPR162Q16538 588 aa19.98■□□□□ 0.79
GRN-204ENST00000586242 SLC4A2P04920 1241 aa19.97■□□□□ 0.79
GRN-204ENST00000586242 YBX3P16989 372 aaKnown RBP eCLIP19.97■□□□□ 0.793e-7■□□□□ 9.4
GRN-204ENST00000586242 FRAT1Q92837 279 aaPredicted RBP19.97■□□□□ 0.79
GRN-204ENST00000586242 SLC4A9Q96Q91 983 aa19.97■□□□□ 0.79
GRN-204ENST00000586242 MRPL50Q8N5N7 158 aaKnown RBP19.96■□□□□ 0.79
GRN-204ENST00000586242 GOLGA6L2Q8N9W4 650 aaPredicted RBP19.96■□□□□ 0.79
GRN-204ENST00000586242 CHPF2Q9P2E5 772 aa19.96■□□□□ 0.79
GRN-204ENST00000586242 LAMB4A4D0S4 1761 aa19.95■□□□□ 0.78
GRN-204ENST00000586242 DBF4Q9UBU7 674 aaPredicted RBP19.95■□□□□ 0.78
GRN-204ENST00000586242 ANXA1P04083 346 aa19.93■□□□□ 0.78
GRN-204ENST00000586242 A1BGP04217 495 aa19.93■□□□□ 0.78
GRN-204ENST00000586242 MYL6BP14649 208 aa19.93■□□□□ 0.78
GRN-204ENST00000586242 ITPK1Q13572 414 aa19.93■□□□□ 0.78
GRN-204ENST00000586242 LINC00116Q8NCU8 138 aa19.93■□□□□ 0.78
GRN-204ENST00000586242 NOB1Q9ULX3 412 aaKnown RBP19.93■□□□□ 0.78
GRN-204ENST00000586242 KIF16BQ96L93 1317 aa19.93■□□□□ 0.78
GRN-204ENST00000586242 TJP1Q07157 1748 aa19.93■□□□□ 0.78
GRN-204ENST00000586242 IPO8O15397 1037 aaKnown RBP19.92■□□□□ 0.78
GRN-204ENST00000586242 PLIN1O60240 522 aa19.92■□□□□ 0.78
GRN-204ENST00000586242 PHF14O94880 888 aa19.92■□□□□ 0.78
GRN-204ENST00000586242 CYP19A1P11511 503 aaPredicted RBP19.92■□□□□ 0.78
GRN-204ENST00000586242 PIP4K2AP48426 406 aaPredicted RBP19.92■□□□□ 0.78
GRN-204ENST00000586242 RRP1P56182 461 aaKnown RBP19.92■□□□□ 0.78
GRN-204ENST00000586242 DDX21Q9NR30 783 aaKnown RBP eCLIP19.92■□□□□ 0.78
GRN-204ENST00000586242 WWC3Q9ULE0 1092 aa19.92■□□□□ 0.78
GRN-204ENST00000586242 CACNA1FO60840 1977 aa19.92■□□□□ 0.78
GRN-204ENST00000586242 HYPKQ9NX55 129 aa19.91■□□□□ 0.78
GRN-204ENST00000586242 ERBB4Q15303 1308 aa19.91■□□□□ 0.78
GRN-204ENST00000586242 BRPF1P55201 1214 aaPredicted RBP19.9■□□□□ 0.78
GRN-204ENST00000586242 PROSER3Q2NL68 480 aa19.9■□□□□ 0.78
GRN-204ENST00000586242 ZKSCAN2Q63HK3 967 aa19.9■□□□□ 0.78
GRN-204ENST00000586242 G2E3Q7L622 706 aa19.9■□□□□ 0.78
GRN-204ENST00000586242 ZNF330Q9Y3S2 320 aaPredicted RBP19.9■□□□□ 0.78
GRN-204ENST00000586242 NPM2Q86SE8 214 aaKnown RBP19.89■□□□□ 0.77
GRN-204ENST00000586242 PHAXQ9H814 394 aaKnown RBP19.89■□□□□ 0.77
GRN-204ENST00000586242 CCDC87Q9NVE4 849 aa19.89■□□□□ 0.77
GRN-204ENST00000586242 ZNF831Q5JPB2 1677 aa19.88■□□□□ 0.77
GRN-204ENST00000586242 NBPF26B4DH59 902 aa19.88■□□□□ 0.77
GRN-204ENST00000586242 CRKLP46109 303 aaKnown RBP19.88■□□□□ 0.77
GRN-204ENST00000586242 AIMP1Q12904 312 aaKnown RBP19.88■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 72.8 ms