RNA–Protein interactions for RNA: ENST00000585867.2

RBFOX1-222, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 2 BASIC

Gene RBFOX1, Length 1,580 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-222ENST00000585867 ZNF831Q5JPB2 1677 aa22.86■■□□□ 1.25
RBFOX1-222ENST00000585867 ALDH1L2Q3SY69 923 aa22.86■■□□□ 1.25
RBFOX1-222ENST00000585867 TSPYL6Q8N831 410 aa22.86■■□□□ 1.25
RBFOX1-222ENST00000585867 BCAR3O75815 825 aa22.84■■□□□ 1.25
RBFOX1-222ENST00000585867 TJP1Q07157 1748 aa22.84■■□□□ 1.25
RBFOX1-222ENST00000585867 TWISTNBQ3B726 338 aaPredicted RBP22.84■■□□□ 1.25
RBFOX1-222ENST00000585867 LINC00116Q8NCU8 138 aa22.84■■□□□ 1.25
RBFOX1-222ENST00000585867 CANXP27824 592 aaKnown RBP22.84■■□□□ 1.25
RBFOX1-222ENST00000585867 SOS1Q07889 1333 aaPredicted RBP22.83■■□□□ 1.25
RBFOX1-222ENST00000585867 C5P01031 1676 aa22.83■■□□□ 1.25
RBFOX1-222ENST00000585867 STARD3NLO95772 234 aa22.83■■□□□ 1.25
RBFOX1-222ENST00000585867 HOXB7P09629 217 aa22.83■■□□□ 1.25
RBFOX1-222ENST00000585867 CYP19A1P11511 503 aaPredicted RBP22.83■■□□□ 1.25
RBFOX1-222ENST00000585867 EIF2S2P20042 333 aaKnown RBP22.83■■□□□ 1.25
RBFOX1-222ENST00000585867 CICQ96RK0 1608 aaPredicted RBP22.82■■□□□ 1.24
RBFOX1-222ENST00000585867 HMGB2P26583 209 aaKnown RBP22.82■■□□□ 1.24
RBFOX1-222ENST00000585867 SMC4Q9NTJ3 1288 aa22.82■■□□□ 1.24
RBFOX1-222ENST00000585867 TAF1LQ8IZX4 1826 aa22.81■■□□□ 1.24
RBFOX1-222ENST00000585867 PLIN1O60240 522 aa22.81■■□□□ 1.24
RBFOX1-222ENST00000585867 VAMP4O75379 141 aa22.81■■□□□ 1.24
RBFOX1-222ENST00000585867 RREB1Q92766 1687 aa22.81■■□□□ 1.24
RBFOX1-222ENST00000585867 NECTIN2Q92692 538 aa22.8■■□□□ 1.24
RBFOX1-222ENST00000585867 KIF16BQ96L93 1317 aa22.8■■□□□ 1.24
RBFOX1-222ENST00000585867 MS4A1P11836 297 aa22.8■■□□□ 1.24
RBFOX1-222ENST00000585867 CRKLP46109 303 aaKnown RBP22.8■■□□□ 1.24
RBFOX1-222ENST00000585867 PDE3AQ14432 1141 aa22.8■■□□□ 1.24
RBFOX1-222ENST00000585867 PPP4R2Q9NY27 417 aa22.8■■□□□ 1.24
RBFOX1-222ENST00000585867 COL5A3P25940 1745 aaPredicted RBP22.79■■□□□ 1.24
RBFOX1-222ENST00000585867 BRPF1P55201 1214 aaPredicted RBP22.79■■□□□ 1.24
RBFOX1-222ENST00000585867 HDGFL1Q5TGJ6 251 aa22.79■■□□□ 1.24
RBFOX1-222ENST00000585867 LAMB4A4D0S4 1761 aa22.78■■□□□ 1.24
RBFOX1-222ENST00000585867 A1BGP04217 495 aa22.78■■□□□ 1.24
RBFOX1-222ENST00000585867 SSH1Q8WYL5 1049 aa22.78■■□□□ 1.24
RBFOX1-222ENST00000585867 CCDC87Q9NVE4 849 aa22.78■■□□□ 1.24
RBFOX1-222ENST00000585867 C4BP0C0L5 1744 aa22.77■■□□□ 1.24
RBFOX1-222ENST00000585867 SOCS7O14512 581 aa22.77■■□□□ 1.24
RBFOX1-222ENST00000585867 RC3H1Q5TC82 1133 aaKnown RBP22.77■■□□□ 1.24
RBFOX1-222ENST00000585867 INTS5Q6P9B9 1019 aaKnown RBP22.77■■□□□ 1.24
RBFOX1-222ENST00000585867 CNTNAP4Q9C0A0 1308 aa22.77■■□□□ 1.24
RBFOX1-222ENST00000585867 NUP188Q5SRE5 1749 aa22.77■■□□□ 1.24
RBFOX1-222ENST00000585867 IPO8O15397 1037 aaKnown RBP22.76■■□□□ 1.23
RBFOX1-222ENST00000585867 FRAT1Q92837 279 aaPredicted RBP22.76■■□□□ 1.23
RBFOX1-222ENST00000585867 BCL2L13Q9BXK5 485 aa22.76■■□□□ 1.23
RBFOX1-222ENST00000585867 CHMP4AQ9BY43 222 aa22.76■■□□□ 1.23
RBFOX1-222ENST00000585867 ZKSCAN2Q63HK3 967 aa22.76■■□□□ 1.23
RBFOX1-222ENST00000585867 AK7Q96M32 723 aa22.76■■□□□ 1.23
RBFOX1-222ENST00000585867 ZBTB1Q9Y2K1 713 aa22.76■■□□□ 1.23
RBFOX1-222ENST00000585867 PIP4K2AP48426 406 aaPredicted RBP22.75■■□□□ 1.23
RBFOX1-222ENST00000585867 CCDC30Q5VVM6 783 aa22.75■■□□□ 1.23
RBFOX1-222ENST00000585867 TCERG1O14776 1098 aaKnown RBP22.74■■□□□ 1.23
RBFOX1-222ENST00000585867 ZNF827Q17R98 1081 aa22.74■■□□□ 1.23
RBFOX1-222ENST00000585867 AKT1S1Q96B36 256 aa22.74■■□□□ 1.23
RBFOX1-222ENST00000585867 MYH14Q7Z406 1995 aaKnown RBP22.74■■□□□ 1.23
RBFOX1-222ENST00000585867 NBPF26B4DH59 902 aa22.73■■□□□ 1.23
RBFOX1-222ENST00000585867 GNPATO15228 680 aa22.73■■□□□ 1.23
RBFOX1-222ENST00000585867 NBPF14Q5TI25 921 aa22.73■■□□□ 1.23
RBFOX1-222ENST00000585867 NBPF10Q6P3W6 841 aaKnown RBP22.73■■□□□ 1.23
RBFOX1-222ENST00000585867 NBPF15Q8N660 670 aa22.73■■□□□ 1.23
RBFOX1-222ENST00000585867 STK32BQ9NY57 414 aa22.73■■□□□ 1.23
RBFOX1-222ENST00000585867 ERBB4Q15303 1308 aa22.73■■□□□ 1.23
RBFOX1-222ENST00000585867 RPS6KA4O75676 772 aa22.72■■□□□ 1.23
RBFOX1-222ENST00000585867 ANO8Q9HCE9 1232 aaPredicted RBP22.72■■□□□ 1.23
RBFOX1-222ENST00000585867 CHPF2Q9P2E5 772 aa22.72■■□□□ 1.23
RBFOX1-222ENST00000585867 DBF4Q9UBU7 674 aaPredicted RBP22.72■■□□□ 1.23
RBFOX1-222ENST00000585867 CACNA1FO60840 1977 aa22.72■■□□□ 1.23
RBFOX1-222ENST00000585867 ANXA1P04083 346 aa22.72■■□□□ 1.23
RBFOX1-222ENST00000585867 MYL6BP14649 208 aa22.72■■□□□ 1.23
RBFOX1-222ENST00000585867 PDIA6Q15084 440 aa22.72■■□□□ 1.23
RBFOX1-222ENST00000585867 SLC15A2Q16348 729 aa22.72■■□□□ 1.23
RBFOX1-222ENST00000585867 EXOC6Q8TAG9 804 aa22.72■■□□□ 1.23
RBFOX1-222ENST00000585867 CRBNQ96SW2 442 aa22.72■■□□□ 1.23
RBFOX1-222ENST00000585867 STK31Q9BXU1 1019 aa22.72■■□□□ 1.23
RBFOX1-222ENST00000585867 DDX21Q9NR30 783 aaKnown RBP eCLIP22.72■■□□□ 1.23
RBFOX1-222ENST00000585867 RTCBQ9Y3I0 505 aaKnown RBP22.72■■□□□ 1.23
RBFOX1-222ENST00000585867 C20orf194Q5TEA3 1177 aa22.71■■□□□ 1.23
RBFOX1-222ENST00000585867 MRPL50Q8N5N7 158 aaKnown RBP22.71■■□□□ 1.23
RBFOX1-222ENST00000585867 TFCP2L1Q9NZI6 479 aa22.71■■□□□ 1.23
RBFOX1-222ENST00000585867 ZNF330Q9Y3S2 320 aaPredicted RBP22.71■■□□□ 1.23
RBFOX1-222ENST00000585867 IL6STP40189 918 aaPredicted RBP22.7■■□□□ 1.22
RBFOX1-222ENST00000585867 PROSER3Q2NL68 480 aa22.7■■□□□ 1.22
RBFOX1-222ENST00000585867 SMIM5Q71RC9 77 aa22.7■■□□□ 1.22
RBFOX1-222ENST00000585867 ARHGAP45Q92619 1136 aa22.7■■□□□ 1.22
RBFOX1-222ENST00000585867 EIF5P55010 431 aaKnown RBP22.69■■□□□ 1.22
RBFOX1-222ENST00000585867 ATF7IPQ6VMQ6 1270 aa22.69■■□□□ 1.22
RBFOX1-222ENST00000585867 NOB1Q9ULX3 412 aaKnown RBP22.69■■□□□ 1.22
RBFOX1-222ENST00000585867 SLC4A2P04920 1241 aa22.68■■□□□ 1.22
RBFOX1-222ENST00000585867 NPM2Q86SE8 214 aaKnown RBP22.68■■□□□ 1.22
RBFOX1-222ENST00000585867 AMIGO3Q86WK7 504 aa22.68■■□□□ 1.22
RBFOX1-222ENST00000585867 FTSJ3Q8IY81 847 aaKnown RBP22.68■■□□□ 1.22
RBFOX1-222ENST00000585867 PHF14O94880 888 aa22.67■■□□□ 1.22
RBFOX1-222ENST00000585867 DZIP1LQ8IYY4 767 aaKnown RBP22.67■■□□□ 1.22
RBFOX1-222ENST00000585867 HYPKQ9NX55 129 aa22.67■■□□□ 1.22
RBFOX1-222ENST00000585867 AAMPQ13685 434 aa22.67■■□□□ 1.22
RBFOX1-222ENST00000585867 TRAPPC3LQ5T215 181 aa22.67■■□□□ 1.22
RBFOX1-222ENST00000585867 UBR3Q6ZT12 1888 aa22.66■■□□□ 1.22
RBFOX1-222ENST00000585867 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP22.66■■□□□ 1.22
RBFOX1-222ENST00000585867 SSFA2P28290 1259 aa22.66■■□□□ 1.22
RBFOX1-222ENST00000585867 LRP10Q7Z4F1 713 aa22.66■■□□□ 1.22
RBFOX1-222ENST00000585867 TRIM27P14373 513 aa22.65■■□□□ 1.22
RBFOX1-222ENST00000585867 ARXQ96QS3 562 aa22.65■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms