RNA–Protein interactions for RNA: ENST00000585749.5

SDF2-203, Transcript of stromal cell derived factor 2, humanhuman

TSL 3

Gene SDF2, Length 823 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-203ENST00000585749 KDRP35968 1356 aa12.74□□□□□ -0.37
SDF2-203ENST00000585749 GYS1P13807 737 aa12.74□□□□□ -0.37
SDF2-203ENST00000585749 TRAPPC3LQ5T215 181 aa12.74□□□□□ -0.37
SDF2-203ENST00000585749 GGNBP2Q9H3C7 697 aa12.74□□□□□ -0.37
SDF2-203ENST00000585749 ARHGEF1Q92888 912 aaKnown RBP12.73□□□□□ -0.37
SDF2-203ENST00000585749 TMOD3Q9NYL9 352 aa12.73□□□□□ -0.37
SDF2-203ENST00000585749 PIM2Q9P1W9 311 aa12.73□□□□□ -0.37
SDF2-203ENST00000585749 RTCBQ9Y3I0 505 aaKnown RBP12.73□□□□□ -0.37
SDF2-203ENST00000585749 KIF24Q5T7B8 1368 aa12.72□□□□□ -0.37
SDF2-203ENST00000585749 DALRD3Q5D0E6 543 aaKnown RBP12.72□□□□□ -0.37
SDF2-203ENST00000585749 POLR3GLQ9BT43 218 aa12.72□□□□□ -0.37
SDF2-203ENST00000585749 ATG3Q9NT62 314 aa12.72□□□□□ -0.37
SDF2-203ENST00000585749 PARP3Q9Y6F1 533 aa12.72□□□□□ -0.37
SDF2-203ENST00000585749 CD44P16070 742 aaKnown RBP12.71□□□□□ -0.37
SDF2-203ENST00000585749 SP7Q8TDD2 431 aaPredicted RBP12.71□□□□□ -0.37
SDF2-203ENST00000585749 SLC4A9Q96Q91 983 aa12.71□□□□□ -0.37
SDF2-203ENST00000585749 KDM6AO15550 1401 aaPredicted RBP12.71□□□□□ -0.38
SDF2-203ENST00000585749 ZC3H4Q9UPT8 1303 aaKnown RBP12.7□□□□□ -0.38
SDF2-203ENST00000585749 SPG7Q9UQ90 795 aa12.7□□□□□ -0.38
SDF2-203ENST00000585749 MYH14Q7Z406 1995 aaKnown RBP12.7□□□□□ -0.38
SDF2-203ENST00000585749 RC3H1Q5TC82 1133 aaKnown RBP12.69□□□□□ -0.38
SDF2-203ENST00000585749 TIAM2Q8IVF5 1701 aa12.68□□□□□ -0.38
SDF2-203ENST00000585749 KIF7Q2M1P5 1343 aa12.68□□□□□ -0.38
SDF2-203ENST00000585749 CNTNAP4Q9C0A0 1308 aa12.68□□□□□ -0.38
SDF2-203ENST00000585749 PHKG2P15735 406 aa12.68□□□□□ -0.38
SDF2-203ENST00000585749 CHRNA5P30532 468 aa12.68□□□□□ -0.38
SDF2-203ENST00000585749 RFC4P35249 363 aa12.68□□□□□ -0.38
SDF2-203ENST00000585749 VASPP50552 380 aaPredicted RBP12.68□□□□□ -0.38
SDF2-203ENST00000585749 PANK3Q9H999 370 aa12.68□□□□□ -0.38
SDF2-203ENST00000585749 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.68□□□□□ -0.38
SDF2-203ENST00000585749 GLTPD2A6NH11 291 aa12.67□□□□□ -0.38
SDF2-203ENST00000585749 RPS6KA4O75676 772 aa12.67□□□□□ -0.38
SDF2-203ENST00000585749 VEGFAP15692 232 aaPredicted RBP12.67□□□□□ -0.38
SDF2-203ENST00000585749 RASSF7Q02833 373 aa12.67□□□□□ -0.38
SDF2-203ENST00000585749 DDR1Q08345 913 aa12.67□□□□□ -0.38
SDF2-203ENST00000585749 IFNL2Q8IZJ0 200 aa12.67□□□□□ -0.38
SDF2-203ENST00000585749 EMILIN1Q9Y6C2 1016 aa12.67□□□□□ -0.38
SDF2-203ENST00000585749 SRP68Q9UHB9 627 aaKnown RBP12.65□□□□□ -0.38
SDF2-203ENST00000585749 DLEC1Q9Y238 1755 aa12.65□□□□□ -0.38
SDF2-203ENST00000585749 CCDC88AQ3V6T2 1871 aa12.65□□□□□ -0.38
SDF2-203ENST00000585749 ADAMTS7Q9UKP4 1686 aa12.64□□□□□ -0.39
SDF2-203ENST00000585749 POTECB2RU33 542 aa12.64□□□□□ -0.39
SDF2-203ENST00000585749 LMNB1P20700 586 aa12.64□□□□□ -0.39
SDF2-203ENST00000585749 EYA1Q99502 592 aa12.64□□□□□ -0.39
SDF2-203ENST00000585749 USP42Q9H9J4 1324 aaKnown RBP12.63□□□□□ -0.39
SDF2-203ENST00000585749 POLRMTO00411 1230 aaKnown RBP12.63□□□□□ -0.39
SDF2-203ENST00000585749 FOXN1O15353 648 aa12.63□□□□□ -0.39
SDF2-203ENST00000585749 TJP1Q07157 1748 aa12.62□□□□□ -0.39
SDF2-203ENST00000585749 ERVV-2B6SEH9 535 aa12.62□□□□□ -0.39
SDF2-203ENST00000585749 PRDM10Q9NQV6 1147 aa12.62□□□□□ -0.39
SDF2-203ENST00000585749 MKRN1Q9UHC7 482 aaKnown RBP12.62□□□□□ -0.39
SDF2-203ENST00000585749 KNSTRNQ9Y448 316 aa12.62□□□□□ -0.39
SDF2-203ENST00000585749 AFDNP55196 1824 aaKnown RBP12.62□□□□□ -0.39
SDF2-203ENST00000585749 NRXN2Q9P2S2 1712 aa12.62□□□□□ -0.39
SDF2-203ENST00000585749 WASHC2AQ641Q2 1341 aa12.62□□□□□ -0.39
SDF2-203ENST00000585749 TM4SF1P30408 202 aa12.61□□□□□ -0.39
SDF2-203ENST00000585749 POLKQ9UBT6 870 aa12.61□□□□□ -0.39
SDF2-203ENST00000585749 CRKLP46109 303 aaKnown RBP12.6□□□□□ -0.39
SDF2-203ENST00000585749 AMER1Q5JTC6 1135 aaPredicted RBP12.6□□□□□ -0.39
SDF2-203ENST00000585749 CNTNAP1P78357 1384 aa12.59□□□□□ -0.39
SDF2-203ENST00000585749 DICER1Q9UPY3 1922 aaKnown RBP12.59□□□□□ -0.39
SDF2-203ENST00000585749 NFKBIEO00221 500 aa12.59□□□□□ -0.39
SDF2-203ENST00000585749 PPM1GO15355 546 aaPredicted RBP12.59□□□□□ -0.39
SDF2-203ENST00000585749 ZBTB47Q9UFB7 747 aaPredicted RBP12.59□□□□□ -0.39
SDF2-203ENST00000585749 PER1O15534 1290 aaPredicted RBP12.58□□□□□ -0.4
SDF2-203ENST00000585749 TNNT2P45379 298 aaPredicted RBP12.58□□□□□ -0.4
SDF2-203ENST00000585749 FAM161AQ3B820 660 aa12.58□□□□□ -0.4
SDF2-203ENST00000585749 MORC1Q86VD1 984 aa12.58□□□□□ -0.4
SDF2-203ENST00000585749 VIRMAQ69YN4 1812 aaKnown RBP12.58□□□□□ -0.4
SDF2-203ENST00000585749 NPC1L1Q9UHC9 1359 aa12.57□□□□□ -0.4
SDF2-203ENST00000585749 PTCD1O75127 700 aaKnown RBP12.57□□□□□ -0.4
SDF2-203ENST00000585749 HSP90AB1P08238 724 aaKnown RBP12.57□□□□□ -0.4
SDF2-203ENST00000585749 CTCFP49711 727 aaPredicted RBP12.57□□□□□ -0.4
SDF2-203ENST00000585749 TTLL6Q8N841 843 aa12.57□□□□□ -0.4
SDF2-203ENST00000585749 PCDH10Q9P2E7 1040 aa12.57□□□□□ -0.4
SDF2-203ENST00000585749 POTEIP0CG38 1075 aa12.56□□□□□ -0.4
SDF2-203ENST00000585749 POTEJP0CG39 1038 aa12.56□□□□□ -0.4
SDF2-203ENST00000585749 USPL1Q5W0Q7 1092 aa12.56□□□□□ -0.4
SDF2-203ENST00000585749 DPY19L2Q6NUT2 758 aa12.56□□□□□ -0.4
SDF2-203ENST00000585749 INTS5Q6P9B9 1019 aaKnown RBP12.56□□□□□ -0.4
SDF2-203ENST00000585749 FER1L6Q2WGJ9 1857 aa12.56□□□□□ -0.4
SDF2-203ENST00000585749 CABP4P57796 275 aa12.55□□□□□ -0.4
SDF2-203ENST00000585749 EIF4A2Q14240 407 aaKnown RBP12.55□□□□□ -0.4
SDF2-203ENST00000585749 RASEFQ8IZ41 740 aa12.55□□□□□ -0.4
SDF2-203ENST00000585749 PASKQ96RG2 1323 aa12.55□□□□□ -0.4
SDF2-203ENST00000585749 CARMIL3Q8ND23 1372 aa12.55□□□□□ -0.4
SDF2-203ENST00000585749 ZPR1O75312 459 aa12.54□□□□□ -0.4
SDF2-203ENST00000585749 VEGFBP49765 207 aa12.54□□□□□ -0.4
SDF2-203ENST00000585749 LBX1P52954 281 aa12.54□□□□□ -0.4
SDF2-203ENST00000585749 NUBP1P53384 320 aa12.54□□□□□ -0.4
SDF2-203ENST00000585749 NFIXQ14938 502 aa12.54□□□□□ -0.4
SDF2-203ENST00000585749 AIDAQ96BJ3 306 aa12.54□□□□□ -0.4
SDF2-203ENST00000585749 ABHD8Q96I13 439 aa12.54□□□□□ -0.4
SDF2-203ENST00000585749 TSPYL2Q9H2G4 693 aaPredicted RBP12.54□□□□□ -0.4
SDF2-203ENST00000585749 WBP1LQ9NX94 342 aa12.54□□□□□ -0.4
SDF2-203ENST00000585749 SOS1Q07889 1333 aaPredicted RBP12.54□□□□□ -0.4
SDF2-203ENST00000585749 GABBR2O75899 941 aa12.53□□□□□ -0.4
SDF2-203ENST00000585749 ERFEQ4G0M1 354 aa12.53□□□□□ -0.4
SDF2-203ENST00000585749 C2CD5Q86YS7 1000 aa12.53□□□□□ -0.4
SDF2-203ENST00000585749 ZNF579Q8NAF0 562 aaKnown RBP12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms