RNA–Protein interactions for RNA: ENST00000585333.1

TRIM47-202, Transcript of tripartite motif containing 47, humanhuman

TSL 3

Gene TRIM47, Length 595 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-202ENST00000585333 BAG6P46379 1132 aa16.52■□□□□ 0.24
TRIM47-202ENST00000585333 DDX21Q9NR30 783 aaKnown RBP eCLIP16.52■□□□□ 0.24
TRIM47-202ENST00000585333 CCNL1Q9UK58 526 aaPredicted RBP16.52■□□□□ 0.24
TRIM47-202ENST00000585333 PTPRCP08575 1304 aa16.51■□□□□ 0.23
TRIM47-202ENST00000585333 DDX58O95786 925 aaKnown RBP16.51■□□□□ 0.23
TRIM47-202ENST00000585333 KRT24Q2M2I5 525 aa16.51■□□□□ 0.23
TRIM47-202ENST00000585333 ARHGAP45Q92619 1136 aa16.51■□□□□ 0.23
TRIM47-202ENST00000585333 LY75O60449 1722 aa16.5■□□□□ 0.23
TRIM47-202ENST00000585333 RC3H1Q5TC82 1133 aaKnown RBP16.5■□□□□ 0.23
TRIM47-202ENST00000585333 SSH1Q8WYL5 1049 aa16.5■□□□□ 0.23
TRIM47-202ENST00000585333 CNTNAP4Q9C0A0 1308 aa16.49■□□□□ 0.23
TRIM47-202ENST00000585333 SLC4A2P04920 1241 aa16.49■□□□□ 0.23
TRIM47-202ENST00000585333 DNAJC10Q8IXB1 793 aa16.49■□□□□ 0.23
TRIM47-202ENST00000585333 API5Q9BZZ5 524 aaKnown RBP16.49■□□□□ 0.23
TRIM47-202ENST00000585333 EP400Q96L91 3159 aa16.49■□□□□ 0.23
TRIM47-202ENST00000585333 NEFLP07196 543 aa16.48■□□□□ 0.23
TRIM47-202ENST00000585333 CYP19A1P11511 503 aaPredicted RBP16.48■□□□□ 0.23
TRIM47-202ENST00000585333 ZKSCAN2Q63HK3 967 aa16.48■□□□□ 0.23
TRIM47-202ENST00000585333 CCDC87Q9NVE4 849 aa16.48■□□□□ 0.23
TRIM47-202ENST00000585333 USP16Q9Y5T5 823 aa16.48■□□□□ 0.23
TRIM47-202ENST00000585333 C5P01031 1676 aa16.48■□□□□ 0.23
TRIM47-202ENST00000585333 TNS1Q9HBL0 1735 aaKnown RBP16.48■□□□□ 0.23
TRIM47-202ENST00000585333 A0A087WZG4 1122 aa16.47■□□□□ 0.23
TRIM47-202ENST00000585333 IL6STP40189 918 aaPredicted RBP16.47■□□□□ 0.23
TRIM47-202ENST00000585333 MRPL50Q8N5N7 158 aaKnown RBP16.47■□□□□ 0.23
TRIM47-202ENST00000585333 CHMP4BQ9H444 224 aaKnown RBP16.47■□□□□ 0.23
TRIM47-202ENST00000585333 CHPF2Q9P2E5 772 aa16.47■□□□□ 0.23
TRIM47-202ENST00000585333 TJP1Q07157 1748 aa16.46■□□□□ 0.23
TRIM47-202ENST00000585333 RRP1P56182 461 aaKnown RBP16.46■□□□□ 0.23
TRIM47-202ENST00000585333 TXNRD1Q16881 649 aa16.46■□□□□ 0.23
TRIM47-202ENST00000585333 RGL2O15211 777 aa16.45■□□□□ 0.22
TRIM47-202ENST00000585333 CRKLP46109 303 aaKnown RBP16.45■□□□□ 0.22
TRIM47-202ENST00000585333 FLIIQ13045 1269 aa16.45■□□□□ 0.22
TRIM47-202ENST00000585333 PDE3AQ14432 1141 aa16.45■□□□□ 0.22
TRIM47-202ENST00000585333 ATF7IPQ6VMQ6 1270 aa16.45■□□□□ 0.22
TRIM47-202ENST00000585333 FTSJ3Q8IY81 847 aaKnown RBP16.45■□□□□ 0.22
TRIM47-202ENST00000585333 FRAT1Q92837 279 aaPredicted RBP16.45■□□□□ 0.22
TRIM47-202ENST00000585333 RNF123Q5XPI4 1314 aa16.45■□□□□ 0.22
TRIM47-202ENST00000585333 BCAR3O75815 825 aa16.44■□□□□ 0.22
TRIM47-202ENST00000585333 ADRA2BP18089 450 aa16.44■□□□□ 0.22
TRIM47-202ENST00000585333 FKBP5Q13451 457 aaPredicted RBP16.44■□□□□ 0.22
TRIM47-202ENST00000585333 KIF6Q6ZMV9 814 aa16.44■□□□□ 0.22
TRIM47-202ENST00000585333 PTF1AQ7RTS3 328 aa16.44■□□□□ 0.22
TRIM47-202ENST00000585333 NECTIN2Q92692 538 aa16.44■□□□□ 0.22
TRIM47-202ENST00000585333 AK7Q96M32 723 aa16.44■□□□□ 0.22
TRIM47-202ENST00000585333 SLC4A9Q96Q91 983 aa16.44■□□□□ 0.22
TRIM47-202ENST00000585333 BCL2L13Q9BXK5 485 aa16.44■□□□□ 0.22
TRIM47-202ENST00000585333 COL5A3P25940 1745 aaPredicted RBP16.43■□□□□ 0.22
TRIM47-202ENST00000585333 PRAMEF22A3QJZ6 481 aa16.43■□□□□ 0.22
TRIM47-202ENST00000585333 ITPK1Q13572 414 aa16.43■□□□□ 0.22
TRIM47-202ENST00000585333 FLAD1Q8NFF5 587 aa16.43■□□□□ 0.22
TRIM47-202ENST00000585333 NOB1Q9ULX3 412 aaKnown RBP16.43■□□□□ 0.22
TRIM47-202ENST00000585333 RTCBQ9Y3I0 505 aaKnown RBP16.43■□□□□ 0.22
TRIM47-202ENST00000585333 SUPT16HQ9Y5B9 1047 aaKnown RBP16.43■□□□□ 0.22
TRIM47-202ENST00000585333 MYL6BP14649 208 aa16.42■□□□□ 0.22
TRIM47-202ENST00000585333 RREB1Q92766 1687 aa16.42■□□□□ 0.22
TRIM47-202ENST00000585333 PXDNLA1KZ92 1463 aa16.42■□□□□ 0.22
TRIM47-202ENST00000585333 RPS6KA4O75676 772 aa16.41■□□□□ 0.22
TRIM47-202ENST00000585333 A1BGP04217 495 aa16.41■□□□□ 0.22
TRIM47-202ENST00000585333 NEXNQ0ZGT2 675 aa16.41■□□□□ 0.22
TRIM47-202ENST00000585333 AAMPQ13685 434 aa16.41■□□□□ 0.22
TRIM47-202ENST00000585333 PDIA6Q15084 440 aa16.41■□□□□ 0.22
TRIM47-202ENST00000585333 HSP90AB3PQ58FF7 597 aa16.41■□□□□ 0.22
TRIM47-202ENST00000585333 DZIP1LQ8IYY4 767 aaKnown RBP16.41■□□□□ 0.22
TRIM47-202ENST00000585333 LINC00116Q8NCU8 138 aa16.41■□□□□ 0.22
TRIM47-202ENST00000585333 SSFA2P28290 1259 aa16.4■□□□□ 0.22
TRIM47-202ENST00000585333 CCT4P50991 539 aaKnown RBP16.4■□□□□ 0.22
TRIM47-202ENST00000585333 KSR2Q6VAB6 950 aa16.4■□□□□ 0.22
TRIM47-202ENST00000585333 PLBD2Q8NHP8 589 aa16.4■□□□□ 0.22
TRIM47-202ENST00000585333 HDAC5Q9UQL6 1122 aa16.4■□□□□ 0.22
TRIM47-202ENST00000585333 ZNF652Q9Y2D9 606 aa16.4■□□□□ 0.22
TRIM47-202ENST00000585333 ZBTB1Q9Y2K1 713 aa16.4■□□□□ 0.22
TRIM47-202ENST00000585333 C4BP0C0L5 1744 aa16.39■□□□□ 0.21
TRIM47-202ENST00000585333 NBPF26B4DH59 902 aa16.39■□□□□ 0.21
TRIM47-202ENST00000585333 ERVV-1B6SEH8 477 aa16.39■□□□□ 0.21
TRIM47-202ENST00000585333 TCERG1O14776 1098 aaKnown RBP16.39■□□□□ 0.21
TRIM47-202ENST00000585333 GNPATO15228 680 aa16.39■□□□□ 0.21
TRIM47-202ENST00000585333 EIF5P55010 431 aaKnown RBP16.39■□□□□ 0.21
TRIM47-202ENST00000585333 NBPF14Q5TI25 921 aa16.39■□□□□ 0.21
TRIM47-202ENST00000585333 NBPF10Q6P3W6 841 aaKnown RBP16.39■□□□□ 0.21
TRIM47-202ENST00000585333 INTS5Q6P9B9 1019 aaKnown RBP16.39■□□□□ 0.21
TRIM47-202ENST00000585333 ANKRD13DQ6ZTN6 518 aa16.39■□□□□ 0.21
TRIM47-202ENST00000585333 COPS6Q7L5N1 327 aa16.39■□□□□ 0.21
TRIM47-202ENST00000585333 RIC3Q7Z5B4 369 aa16.39■□□□□ 0.21
TRIM47-202ENST00000585333 NBPF15Q8N660 670 aa16.39■□□□□ 0.21
TRIM47-202ENST00000585333 XAGE3Q8WTP9 111 aa16.39■□□□□ 0.21
TRIM47-202ENST00000585333 CAMKK2Q96RR4 588 aa16.39■□□□□ 0.21
TRIM47-202ENST00000585333 TAF1LQ8IZX4 1826 aa16.39■□□□□ 0.21
TRIM47-202ENST00000585333 COL15A1P39059 1388 aa16.38■□□□□ 0.21
TRIM47-202ENST00000585333 TRIM27P14373 513 aa16.38■□□□□ 0.21
TRIM47-202ENST00000585333 ZNF330Q9Y3S2 320 aaPredicted RBP16.38■□□□□ 0.21
TRIM47-202ENST00000585333 IBTKQ9P2D0 1353 aaPredicted RBP16.38■□□□□ 0.21
TRIM47-202ENST00000585333 AIMP1Q12904 312 aaKnown RBP16.37■□□□□ 0.21
TRIM47-202ENST00000585333 ERICH6BQ5W0A0 696 aa16.37■□□□□ 0.21
TRIM47-202ENST00000585333 DZIP3Q86Y13 1208 aaKnown RBP16.37■□□□□ 0.21
TRIM47-202ENST00000585333 DNAAF4Q8WXU2 420 aa16.37■□□□□ 0.21
TRIM47-202ENST00000585333 PHAXQ9H814 394 aaKnown RBP16.37■□□□□ 0.21
TRIM47-202ENST00000585333 LRRC4BQ9NT99 713 aa16.37■□□□□ 0.21
TRIM47-202ENST00000585333 STK32BQ9NY57 414 aa16.37■□□□□ 0.21
TRIM47-202ENST00000585333 ABCC4O15439 1325 aa16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 61.8 ms