RNA–Protein interactions for RNA: ENST00000585294.5

CUEDC1-213, Transcript of CUE domain containing 1, humanhuman

TSL 3

Gene CUEDC1, Length 512 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1-213ENST00000585294 POLRMTO00411 1230 aaKnown RBP17.04■□□□□ 0.32
CUEDC1-213ENST00000585294 U2AF1L5P0DN76 240 aaPredicted RBP17.04■□□□□ 0.32
CUEDC1-213ENST00000585294 U2AF1Q01081 240 aaKnown RBP eCLIP17.04■□□□□ 0.32
CUEDC1-213ENST00000585294 ZNF790Q6PG37 636 aa17.04■□□□□ 0.32
CUEDC1-213ENST00000585294 TTC5Q8N0Z6 440 aa17.04■□□□□ 0.32
CUEDC1-213ENST00000585294 NARFQ9UHQ1 456 aa17.04■□□□□ 0.32
CUEDC1-213ENST00000585294 ADCY9O60503 1353 aa17.03■□□□□ 0.32
CUEDC1-213ENST00000585294 N4BP2Q86UW6 1770 aaPredicted RBP17.03■□□□□ 0.32
CUEDC1-213ENST00000585294 FCHSD2O94868 740 aa17.03■□□□□ 0.32
CUEDC1-213ENST00000585294 CHRNA5P30532 468 aa17.03■□□□□ 0.32
CUEDC1-213ENST00000585294 ARHGAP27Q6ZUM4 889 aa17.03■□□□□ 0.32
CUEDC1-213ENST00000585294 NUDCQ9Y266 331 aa17.03■□□□□ 0.32
CUEDC1-213ENST00000585294 KIF13BQ9NQT8 1826 aa17.03■□□□□ 0.32
CUEDC1-213ENST00000585294 SENP3-EIF4A1A0A087X0R7 540 aa17.02■□□□□ 0.32
CUEDC1-213ENST00000585294 NFIXQ14938 502 aa17.02■□□□□ 0.32
CUEDC1-213ENST00000585294 COL15A1P39059 1388 aa17.02■□□□□ 0.31
CUEDC1-213ENST00000585294 STARD3NLO95772 234 aa17.01■□□□□ 0.31
CUEDC1-213ENST00000585294 EIF5P55010 431 aaKnown RBP17.01■□□□□ 0.31
CUEDC1-213ENST00000585294 GPBP1L1Q9HC44 474 aaPredicted RBP17.01■□□□□ 0.31
CUEDC1-213ENST00000585294 CEMIPQ8WUJ3 1361 aa17.01■□□□□ 0.31
CUEDC1-213ENST00000585294 HEG1Q9ULI3 1381 aa17.01■□□□□ 0.31
CUEDC1-213ENST00000585294 A1BGP04217 495 aa17■□□□□ 0.31
CUEDC1-213ENST00000585294 MCM10Q7L590 875 aa17■□□□□ 0.31
CUEDC1-213ENST00000585294 PIM2Q9P1W9 311 aa17■□□□□ 0.31
CUEDC1-213ENST00000585294 VIRMAQ69YN4 1812 aaKnown RBP17■□□□□ 0.31
CUEDC1-213ENST00000585294 BTBD11A6QL63 1104 aa16.99■□□□□ 0.31
CUEDC1-213ENST00000585294 DCTN1Q14203 1278 aa16.99■□□□□ 0.31
CUEDC1-213ENST00000585294 UBR2Q8IWV8 1755 aa16.98■□□□□ 0.31
CUEDC1-213ENST00000585294 BICDL1Q6ZP65 573 aa16.98■□□□□ 0.31
CUEDC1-213ENST00000585294 FMNL2Q96PY5 1086 aa16.98■□□□□ 0.31
CUEDC1-213ENST00000585294 TBC1D2BQ9UPU7 963 aa16.98■□□□□ 0.31
CUEDC1-213ENST00000585294 ZNF330Q9Y3S2 320 aaPredicted RBP16.98■□□□□ 0.31
CUEDC1-213ENST00000585294 PRAMEF22A3QJZ6 481 aa16.97■□□□□ 0.31
CUEDC1-213ENST00000585294 SERPINB2P05120 415 aa16.97■□□□□ 0.31
CUEDC1-213ENST00000585294 DALRD3Q5D0E6 543 aaKnown RBP16.97■□□□□ 0.31
CUEDC1-213ENST00000585294 TEX13AQ9BXU3 409 aaPredicted RBP16.97■□□□□ 0.31
CUEDC1-213ENST00000585294 PIP4K2AP48426 406 aaPredicted RBP16.96■□□□□ 0.31
CUEDC1-213ENST00000585294 USP16Q9Y5T5 823 aa16.96■□□□□ 0.31
CUEDC1-213ENST00000585294 A0A087WZG4 1122 aa16.95■□□□□ 0.3
CUEDC1-213ENST00000585294 TBC1D9BQ66K14 1250 aa16.95■□□□□ 0.3
CUEDC1-213ENST00000585294 RTF1Q92541 710 aaKnown RBP16.95■□□□□ 0.3
CUEDC1-213ENST00000585294 SIPA1L3O60292 1781 aaPredicted RBP16.94■□□□□ 0.3
CUEDC1-213ENST00000585294 CCDC24Q8N4L8 307 aa16.94■□□□□ 0.3
CUEDC1-213ENST00000585294 MIS18AQ9NYP9 233 aa16.94■□□□□ 0.3
CUEDC1-213ENST00000585294 CARMIL3Q8ND23 1372 aa16.93■□□□□ 0.3
CUEDC1-213ENST00000585294 KIF3CO14782 793 aa16.93■□□□□ 0.3
CUEDC1-213ENST00000585294 IL6STP40189 918 aaPredicted RBP16.93■□□□□ 0.3
CUEDC1-213ENST00000585294 C9orf131Q5VYM1 1079 aa16.93■□□□□ 0.3
CUEDC1-213ENST00000585294 C2CD5Q86YS7 1000 aa16.92■□□□□ 0.3
CUEDC1-213ENST00000585294 BRCA1P38398 1863 aaKnown RBP16.92■□□□□ 0.3
CUEDC1-213ENST00000585294 HTATSF1O43719 755 aaKnown RBP16.91■□□□□ 0.3
CUEDC1-213ENST00000585294 CAMTA2O94983 1202 aa16.91■□□□□ 0.3
CUEDC1-213ENST00000585294 PLEKHF1Q96S99 279 aa16.91■□□□□ 0.3
CUEDC1-213ENST00000585294 SNRPA1P09661 255 aaKnown RBP16.9■□□□□ 0.3
CUEDC1-213ENST00000585294 TAF7Q15545 349 aaPredicted RBP16.9■□□□□ 0.3
CUEDC1-213ENST00000585294 AFDNP55196 1824 aaKnown RBP16.89■□□□□ 0.29
CUEDC1-213ENST00000585294 NBPF26B4DH59 902 aa16.89■□□□□ 0.29
CUEDC1-213ENST00000585294 NBPF10Q6P3W6 841 aaKnown RBP16.89■□□□□ 0.29
CUEDC1-213ENST00000585294 NBPF15Q8N660 670 aa16.89■□□□□ 0.29
CUEDC1-213ENST00000585294 THUMPD2Q9BTF0 503 aaKnown RBP16.89■□□□□ 0.29
CUEDC1-213ENST00000585294 NMRK2Q9NPI5 230 aa16.89■□□□□ 0.29
CUEDC1-213ENST00000585294 NRXN2Q9P2S2 1712 aa16.88■□□□□ 0.29
CUEDC1-213ENST00000585294 H0YIN7 160 aa16.88■□□□□ 0.29
CUEDC1-213ENST00000585294 PRELPP51888 382 aa16.88■□□□□ 0.29
CUEDC1-213ENST00000585294 PRR5LQ6MZQ0 368 aa16.88■□□□□ 0.29
CUEDC1-213ENST00000585294 DZIP3Q86Y13 1208 aaKnown RBP16.88■□□□□ 0.29
CUEDC1-213ENST00000585294 RNF181Q9P0P0 153 aa16.88■□□□□ 0.29
CUEDC1-213ENST00000585294 RASSF7Q02833 373 aa16.87■□□□□ 0.29
CUEDC1-213ENST00000585294 NPM2Q86SE8 214 aaKnown RBP16.87■□□□□ 0.29
CUEDC1-213ENST00000585294 TTLL6Q8N841 843 aa16.87■□□□□ 0.29
CUEDC1-213ENST00000585294 SETDB2Q96T68 719 aa16.87■□□□□ 0.29
CUEDC1-213ENST00000585294 DDX10Q13206 875 aaKnown RBP16.86■□□□□ 0.29
CUEDC1-213ENST00000585294 NFE2L2Q16236 605 aa16.86■□□□□ 0.29
CUEDC1-213ENST00000585294 BRIP1Q9BX63 1249 aa16.86■□□□□ 0.29
CUEDC1-213ENST00000585294 ARFGEF1Q9Y6D6 1849 aa16.86■□□□□ 0.29
CUEDC1-213ENST00000585294 HSPA6P17066 643 aa16.85■□□□□ 0.29
CUEDC1-213ENST00000585294 ZNF622Q969S3 477 aaKnown RBP eCLIP16.85■□□□□ 0.29
CUEDC1-213ENST00000585294 ZNF219Q9P2Y4 722 aaPredicted RBP16.85■□□□□ 0.29
CUEDC1-213ENST00000585294 NEFMP07197 916 aa16.84■□□□□ 0.29
CUEDC1-213ENST00000585294 PDE6BP35913 854 aa16.83■□□□□ 0.28
CUEDC1-213ENST00000585294 SCN7AQ01118 1682 aa16.83■□□□□ 0.28
CUEDC1-213ENST00000585294 CNBD1Q8NA66 436 aa16.83■□□□□ 0.28
CUEDC1-213ENST00000585294 NFKBIEO00221 500 aa16.82■□□□□ 0.28
CUEDC1-213ENST00000585294 HLFQ16534 295 aa16.82■□□□□ 0.28
CUEDC1-213ENST00000585294 NGEFQ8N5V2 710 aa16.82■□□□□ 0.28
CUEDC1-213ENST00000585294 C21orf2O43822 256 aa16.81■□□□□ 0.28
CUEDC1-213ENST00000585294 TOMM70O94826 608 aa16.81■□□□□ 0.28
CUEDC1-213ENST00000585294 EIF4A1P60842 406 aaKnown RBP16.81■□□□□ 0.28
CUEDC1-213ENST00000585294 RALBP1Q15311 655 aa16.81■□□□□ 0.28
CUEDC1-213ENST00000585294 CLEC4GQ6UXB4 293 aa16.81■□□□□ 0.28
CUEDC1-213ENST00000585294 RRAGCQ9HB90 399 aa16.81■□□□□ 0.28
CUEDC1-213ENST00000585294 ANKRD31Q8N7Z5 1873 aa16.8■□□□□ 0.28
CUEDC1-213ENST00000585294 MAPK8IP3Q9UPT6 1336 aa16.8■□□□□ 0.28
CUEDC1-213ENST00000585294 FAM177BA6PVY3 158 aa16.8■□□□□ 0.28
CUEDC1-213ENST00000585294 NPHP1O15259 732 aa16.8■□□□□ 0.28
CUEDC1-213ENST00000585294 LMNB1P20700 586 aa16.8■□□□□ 0.28
CUEDC1-213ENST00000585294 NBPF5PQ86XG9 351 aaPredicted RBP16.8■□□□□ 0.28
CUEDC1-213ENST00000585294 PNISRQ8TF01 805 aaKnown RBP16.8■□□□□ 0.28
CUEDC1-213ENST00000585294 RRP7AQ9Y3A4 280 aaKnown RBP16.8■□□□□ 0.28
CUEDC1-213ENST00000585294 SRGNP10124 158 aa16.79■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms