RNA–Protein interactions for RNA: ENST00000585101.5

ATPAF2-213, Transcript of ATP synthase mitochondrial F1 complex assembly factor 2, humanhuman

TSL 4 BASIC

Gene ATPAF2, Length 566 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF2-213ENST00000585101 USP42Q9H9J4 1324 aaKnown RBP23.35■■□□□ 1.33
ATPAF2-213ENST00000585101 N4BP2Q86UW6 1770 aaPredicted RBP23.35■■□□□ 1.33
ATPAF2-213ENST00000585101 PRAMEF22A3QJZ6 481 aa23.35■■□□□ 1.33
ATPAF2-213ENST00000585101 USPL1Q5W0Q7 1092 aa23.35■■□□□ 1.33
ATPAF2-213ENST00000585101 VSIG10Q8N0Z9 540 aa23.35■■□□□ 1.33
ATPAF2-213ENST00000585101 ZNF330Q9Y3S2 320 aaPredicted RBP23.35■■□□□ 1.33
ATPAF2-213ENST00000585101 NEFMP07197 916 aa23.34■■□□□ 1.33
ATPAF2-213ENST00000585101 PIP4K2AP48426 406 aaPredicted RBP23.34■■□□□ 1.33
ATPAF2-213ENST00000585101 FMNL2Q96PY5 1086 aa23.34■■□□□ 1.33
ATPAF2-213ENST00000585101 COL15A1P39059 1388 aa23.33■■□□□ 1.33
ATPAF2-213ENST00000585101 ZPR1O75312 459 aa23.32■■□□□ 1.32
ATPAF2-213ENST00000585101 A1BGP04217 495 aa23.32■■□□□ 1.32
ATPAF2-213ENST00000585101 PARP3Q9Y6F1 533 aa23.32■■□□□ 1.32
ATPAF2-213ENST00000585101 MAPK8IP3Q9UPT6 1336 aa23.32■■□□□ 1.32
ATPAF2-213ENST00000585101 STARD3NLO95772 234 aa23.31■■□□□ 1.32
ATPAF2-213ENST00000585101 ZEB1P37275 1124 aaPredicted RBP23.31■■□□□ 1.32
ATPAF2-213ENST00000585101 DDR1Q08345 913 aa23.31■■□□□ 1.32
ATPAF2-213ENST00000585101 NFE2L2Q16236 605 aa23.31■■□□□ 1.32
ATPAF2-213ENST00000585101 CCDC146Q8IYE0 955 aa23.31■■□□□ 1.32
ATPAF2-213ENST00000585101 USP16Q9Y5T5 823 aa23.3■■□□□ 1.32
ATPAF2-213ENST00000585101 KIF13BQ9NQT8 1826 aa23.3■■□□□ 1.32
ATPAF2-213ENST00000585101 KIAA1551Q9HCM1 1747 aa23.3■■□□□ 1.32
ATPAF2-213ENST00000585101 HTATSF1O43719 755 aaKnown RBP23.29■■□□□ 1.32
ATPAF2-213ENST00000585101 A0A0G2JLW4 131 aa23.28■■□□□ 1.32
ATPAF2-213ENST00000585101 PRKRIP1Q9H875 184 aaPredicted RBP23.28■■□□□ 1.32
ATPAF2-213ENST00000585101 BCL2L12Q9HB09 334 aa23.28■■□□□ 1.32
ATPAF2-213ENST00000585101 NARFQ9UHQ1 456 aa23.28■■□□□ 1.32
ATPAF2-213ENST00000585101 RRP7AQ9Y3A4 280 aaKnown RBP23.28■■□□□ 1.32
ATPAF2-213ENST00000585101 TAF7Q15545 349 aaPredicted RBP23.27■■□□□ 1.32
ATPAF2-213ENST00000585101 TBC1D2BQ9UPU7 963 aa23.27■■□□□ 1.32
ATPAF2-213ENST00000585101 AFDNP55196 1824 aaKnown RBP23.26■■□□□ 1.31
ATPAF2-213ENST00000585101 C10orf71Q711Q0 1435 aa23.26■■□□□ 1.31
ATPAF2-213ENST00000585101 PXDNLA1KZ92 1463 aa23.26■■□□□ 1.31
ATPAF2-213ENST00000585101 EIF5P55010 431 aaKnown RBP23.26■■□□□ 1.31
ATPAF2-213ENST00000585101 BICDL1Q6ZP65 573 aa23.26■■□□□ 1.31
ATPAF2-213ENST00000585101 KDM3BQ7LBC6 1761 aa23.25■■□□□ 1.31
ATPAF2-213ENST00000585101 POLRMTO00411 1230 aaKnown RBP23.25■■□□□ 1.31
ATPAF2-213ENST00000585101 TM4SF1P30408 202 aa23.25■■□□□ 1.31
ATPAF2-213ENST00000585101 NEUROD2Q15784 382 aa23.25■■□□□ 1.31
ATPAF2-213ENST00000585101 TEX13AQ9BXU3 409 aaPredicted RBP23.25■■□□□ 1.31
ATPAF2-213ENST00000585101 PNNQ9H307 717 aaKnown RBP23.25■■□□□ 1.31
ATPAF2-213ENST00000585101 DPEP1P16444 411 aa23.24■■□□□ 1.31
ATPAF2-213ENST00000585101 RIPK4P57078 832 aa23.24■■□□□ 1.31
ATPAF2-213ENST00000585101 NFIXQ14938 502 aa23.24■■□□□ 1.31
ATPAF2-213ENST00000585101 WDR43Q15061 677 aaKnown RBP eCLIP23.23■■□□□ 1.31
ATPAF2-213ENST00000585101 GRIN3BO60391 1043 aa23.22■■□□□ 1.31
ATPAF2-213ENST00000585101 SNRPA1P09661 255 aaKnown RBP23.22■■□□□ 1.31
ATPAF2-213ENST00000585101 ADAMTS8Q9UP79 889 aa23.22■■□□□ 1.31
ATPAF2-213ENST00000585101 ZNF784Q8NCA9 323 aaPredicted RBP23.21■■□□□ 1.31
ATPAF2-213ENST00000585101 CHRNA5P30532 468 aa23.2■■□□□ 1.3
ATPAF2-213ENST00000585101 IL6STP40189 918 aaPredicted RBP23.2■■□□□ 1.3
ATPAF2-213ENST00000585101 TMPOP42166 694 aaKnown RBP23.2■■□□□ 1.3
ATPAF2-213ENST00000585101 TBC1D9BQ66K14 1250 aa23.2■■□□□ 1.3
ATPAF2-213ENST00000585101 BCS1LQ9Y276 419 aa23.2■■□□□ 1.3
ATPAF2-213ENST00000585101 SCN7AQ01118 1682 aa23.19■■□□□ 1.3
ATPAF2-213ENST00000585101 A0A087WZG4 1122 aa23.19■■□□□ 1.3
ATPAF2-213ENST00000585101 TGFB2P61812 414 aa23.19■■□□□ 1.3
ATPAF2-213ENST00000585101 CCDC24Q8N4L8 307 aa23.19■■□□□ 1.3
ATPAF2-213ENST00000585101 BRCA1P38398 1863 aaKnown RBP23.19■■□□□ 1.3
ATPAF2-213ENST00000585101 NBPF26B4DH59 902 aa23.18■■□□□ 1.3
ATPAF2-213ENST00000585101 SERPINB2P05120 415 aa23.18■■□□□ 1.3
ATPAF2-213ENST00000585101 NBPF10Q6P3W6 841 aaKnown RBP23.18■■□□□ 1.3
ATPAF2-213ENST00000585101 NBPF15Q8N660 670 aa23.18■■□□□ 1.3
ATPAF2-213ENST00000585101 LAMB4A4D0S4 1761 aa23.17■■□□□ 1.3
ATPAF2-213ENST00000585101 ZNF316A6NFI3 1004 aaPredicted RBP23.17■■□□□ 1.3
ATPAF2-213ENST00000585101 KCNA3P22001 575 aa23.17■■□□□ 1.3
ATPAF2-213ENST00000585101 CCDC184Q52MB2 194 aa23.17■■□□□ 1.3
ATPAF2-213ENST00000585101 NPM2Q86SE8 214 aaKnown RBP23.17■■□□□ 1.3
ATPAF2-213ENST00000585101 DZIP3Q86Y13 1208 aaKnown RBP23.17■■□□□ 1.3
ATPAF2-213ENST00000585101 CAMTA2O94983 1202 aa23.16■■□□□ 1.3
ATPAF2-213ENST00000585101 EIF4A1P60842 406 aaKnown RBP23.16■■□□□ 1.3
ATPAF2-213ENST00000585101 NGEFQ8N5V2 710 aa23.16■■□□□ 1.3
ATPAF2-213ENST00000585101 BCORQ6W2J9 1755 aa23.16■■□□□ 1.3
ATPAF2-213ENST00000585101 CARMIL3Q8ND23 1372 aa23.15■■□□□ 1.3
ATPAF2-213ENST00000585101 SENP3-EIF4A1A0A087X0R7 540 aa23.15■■□□□ 1.3
ATPAF2-213ENST00000585101 PNISRQ8TF01 805 aaKnown RBP23.15■■□□□ 1.3
ATPAF2-213ENST00000585101 RUNDC1Q96C34 613 aa23.15■■□□□ 1.3
ATPAF2-213ENST00000585101 TSPYL4Q9UJ04 414 aa23.15■■□□□ 1.3
ATPAF2-213ENST00000585101 NRXN2Q9P2S2 1712 aa23.15■■□□□ 1.3
ATPAF2-213ENST00000585101 GIGYF1O75420 1035 aaPredicted RBP23.13■■□□□ 1.29
ATPAF2-213ENST00000585101 LAS1LQ9Y4W2 734 aaKnown RBP23.13■■□□□ 1.29
ATPAF2-213ENST00000585101 TRIM35Q9UPQ4 493 aa23.12■■□□□ 1.29
ATPAF2-213ENST00000585101 ANKRD31Q8N7Z5 1873 aa23.11■■□□□ 1.29
ATPAF2-213ENST00000585101 MYL6BP14649 208 aa23.1■■□□□ 1.29
ATPAF2-213ENST00000585101 ARHGAP27Q6ZUM4 889 aa23.1■■□□□ 1.29
ATPAF2-213ENST00000585101 PIM2Q9P1W9 311 aa23.1■■□□□ 1.29
ATPAF2-213ENST00000585101 NECTIN2Q92692 538 aa23.09■■□□□ 1.29
ATPAF2-213ENST00000585101 ARFGEF1Q9Y6D6 1849 aa23.08■■□□□ 1.29
ATPAF2-213ENST00000585101 FAM177BA6PVY3 158 aa23.08■■□□□ 1.29
ATPAF2-213ENST00000585101 EIF2S2P20042 333 aaKnown RBP23.08■■□□□ 1.29
ATPAF2-213ENST00000585101 LMOD3Q0VAK6 560 aa23.08■■□□□ 1.29
ATPAF2-213ENST00000585101 KRT24Q2M2I5 525 aa23.08■■□□□ 1.29
ATPAF2-213ENST00000585101 ZNF526Q8TF50 670 aaPredicted RBP23.08■■□□□ 1.29
ATPAF2-213ENST00000585101 HLFQ16534 295 aa23.07■■□□□ 1.28
ATPAF2-213ENST00000585101 DALRD3Q5D0E6 543 aaKnown RBP23.07■■□□□ 1.28
ATPAF2-213ENST00000585101 PRR5LQ6MZQ0 368 aa23.07■■□□□ 1.28
ATPAF2-213ENST00000585101 C2CD5Q86YS7 1000 aa23.07■■□□□ 1.28
ATPAF2-213ENST00000585101 SETDB2Q96T68 719 aa23.07■■□□□ 1.28
ATPAF2-213ENST00000585101 APAF1O14727 1248 aa23.06■■□□□ 1.28
ATPAF2-213ENST00000585101 NPHP1O15259 732 aa23.06■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms