RNA–Protein interactions for RNA: ENST00000585058.1

RAB11FIP4-210, Transcript of RAB11 family interacting protein 4, humanhuman

TSL 2

Gene RAB11FIP4, Length 5,824 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP4-210ENST00000585058 GIMAP7Q8NHV1 300 aa15.4■□□□□ 0.06
RAB11FIP4-210ENST00000585058 STARD3NLO95772 234 aa15.4■□□□□ 0.06
RAB11FIP4-210ENST00000585058 PTCD1O75127 700 aaKnown RBP15.39■□□□□ 0.05
RAB11FIP4-210ENST00000585058 POLR3GO15318 223 aaPredicted RBP15.39■□□□□ 0.05
RAB11FIP4-210ENST00000585058 TDRD12Q587J7 1177 aaKnown RBP15.39■□□□□ 0.05
RAB11FIP4-210ENST00000585058 MYD88Q99836 296 aa15.39■□□□□ 0.05
RAB11FIP4-210ENST00000585058 SLTMQ9NWH9 1034 aaKnown RBP eCLIP15.39■□□□□ 0.05
RAB11FIP4-210ENST00000585058 CAVIN4Q5BKX8 364 aa15.39■□□□□ 0.05
RAB11FIP4-210ENST00000585058 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP15.39■□□□□ 0.05
RAB11FIP4-210ENST00000585058 RANBP6O60518 1105 aaKnown RBP15.39■□□□□ 0.05
RAB11FIP4-210ENST00000585058 CTCFLQ8NI51 663 aaPredicted RBP15.39■□□□□ 0.05
RAB11FIP4-210ENST00000585058 CCDC196A0A1B0GTZ2 297 aa15.38■□□□□ 0.05
RAB11FIP4-210ENST00000585058 SH2B1Q9NRF2 756 aaPredicted RBP15.38■□□□□ 0.05
RAB11FIP4-210ENST00000585058 USP25Q9UHP3 1055 aa15.38■□□□□ 0.05
RAB11FIP4-210ENST00000585058 TNNT1P13805 278 aa15.38■□□□□ 0.05
RAB11FIP4-210ENST00000585058 SSFA2P28290 1259 aa15.38■□□□□ 0.05
RAB11FIP4-210ENST00000585058 SKAP1Q86WV1 359 aa15.38■□□□□ 0.05
RAB11FIP4-210ENST00000585058 UBE4AQ14139 1066 aa15.38■□□□□ 0.05
RAB11FIP4-210ENST00000585058 SLC12A7Q9Y666 1083 aa15.38■□□□□ 0.05
RAB11FIP4-210ENST00000585058 NSD3Q9BZ95 1437 aa15.38■□□□□ 0.05
RAB11FIP4-210ENST00000585058 LARP6Q9BRS8 491 aaKnown RBP15.38■□□□□ 0.05
RAB11FIP4-210ENST00000585058 CCDC8Q9H0W5 538 aaPredicted RBP15.38■□□□□ 0.05
RAB11FIP4-210ENST00000585058 CNNM3Q8NE01 707 aa15.37■□□□□ 0.05
RAB11FIP4-210ENST00000585058 HECW1Q76N89 1606 aa15.37■□□□□ 0.05
RAB11FIP4-210ENST00000585058 MCM3P25205 808 aa15.37■□□□□ 0.05
RAB11FIP4-210ENST00000585058 CCDC96Q2M329 555 aa15.37■□□□□ 0.05
RAB11FIP4-210ENST00000585058 RNF187Q5TA31 235 aaPredicted RBP15.37■□□□□ 0.05
RAB11FIP4-210ENST00000585058 PPP4R3AQ6IN85 833 aa15.37■□□□□ 0.05
RAB11FIP4-210ENST00000585058 C16orf45Q96MC5 204 aaPredicted RBP15.37■□□□□ 0.05
RAB11FIP4-210ENST00000585058 PHAXQ9H814 394 aaKnown RBP15.37■□□□□ 0.05
RAB11FIP4-210ENST00000585058 ATAD2Q6PL18 1390 aa15.37■□□□□ 0.05
RAB11FIP4-210ENST00000585058 ABCA10Q8WWZ4 1543 aa15.37■□□□□ 0.05
RAB11FIP4-210ENST00000585058 PAFAH1B1P43034 410 aa15.37■□□□□ 0.05
RAB11FIP4-210ENST00000585058 C9orf84Q5VXU9 1444 aa15.37■□□□□ 0.05
RAB11FIP4-210ENST00000585058 USO1O60763 962 aaKnown RBP15.37■□□□□ 0.05
RAB11FIP4-210ENST00000585058 LARP1Q6PKG0 1096 aaKnown RBP15.36■□□□□ 0.05
RAB11FIP4-210ENST00000585058 DZIP1Q86YF9 867 aaKnown RBP15.36■□□□□ 0.05
RAB11FIP4-210ENST00000585058 YEATS4O95619 227 aa15.36■□□□□ 0.05
RAB11FIP4-210ENST00000585058 CCT2P78371 535 aaKnown RBP15.36■□□□□ 0.05
RAB11FIP4-210ENST00000585058 EHBP1L1Q8N3D4 1523 aa15.36■□□□□ 0.05
RAB11FIP4-210ENST00000585058 TIAM1Q13009 1591 aa15.36■□□□□ 0.05
RAB11FIP4-210ENST00000585058 TMEM266Q2M3C6 531 aa15.36■□□□□ 0.05
RAB11FIP4-210ENST00000585058 GOLGA8BA8MQT2 603 aa15.35■□□□□ 0.05
RAB11FIP4-210ENST00000585058 ZNF213O14771 459 aa15.35■□□□□ 0.05
RAB11FIP4-210ENST00000585058 FGFR1OPO95684 399 aaKnown RBP15.35■□□□□ 0.05
RAB11FIP4-210ENST00000585058 SSRP1Q08945 709 aaKnown RBP15.35■□□□□ 0.05
RAB11FIP4-210ENST00000585058 FSIP1Q8NA03 581 aa15.35■□□□□ 0.05
RAB11FIP4-210ENST00000585058 RAB34Q9BZG1 259 aa15.35■□□□□ 0.05
RAB11FIP4-210ENST00000585058 BIN1O00499 593 aa15.35■□□□□ 0.05
RAB11FIP4-210ENST00000585058 PRKCSHP14314 528 aaPredicted RBP15.35■□□□□ 0.05
RAB11FIP4-210ENST00000585058 GCOM1H8Y6P7 765 aaPredicted RBP15.35■□□□□ 0.05
RAB11FIP4-210ENST00000585058 MYZAPP0CAP1 466 aa15.35■□□□□ 0.05
RAB11FIP4-210ENST00000585058 MAP3K12Q12852 859 aa15.35■□□□□ 0.05
RAB11FIP4-210ENST00000585058 SMC1AQ14683 1233 aaKnown RBP15.35■□□□□ 0.05
RAB11FIP4-210ENST00000585058 SSH1Q8WYL5 1049 aa15.35■□□□□ 0.05
RAB11FIP4-210ENST00000585058 ANKIB1Q9P2G1 1089 aa15.35■□□□□ 0.05
RAB11FIP4-210ENST00000585058 GOLGA8AA7E2F4 631 aa15.35■□□□□ 0.05
RAB11FIP4-210ENST00000585058 HMGB1P09429 215 aaKnown RBP15.35■□□□□ 0.05
RAB11FIP4-210ENST00000585058 NLRP5P59047 1200 aa15.35■□□□□ 0.05
RAB11FIP4-210ENST00000585058 SPECC1Q5M775 1068 aa15.35■□□□□ 0.05
RAB11FIP4-210ENST00000585058 HOOK3Q86VS8 718 aa15.35■□□□□ 0.05
RAB11FIP4-210ENST00000585058 CGNQ9P2M7 1197 aaKnown RBP15.35■□□□□ 0.05
RAB11FIP4-210ENST00000585058 F6X3S4 739 aa15.35■□□□□ 0.05
RAB11FIP4-210ENST00000585058 IQCA1Q86XH1 822 aa15.35■□□□□ 0.05
RAB11FIP4-210ENST00000585058 TICAM2Q86XR7 235 aa15.35■□□□□ 0.05
RAB11FIP4-210ENST00000585058 ZNF444Q8N0Y2 327 aaPredicted RBP15.35■□□□□ 0.05
RAB11FIP4-210ENST00000585058 TRERF1Q96PN7 1200 aa15.35■□□□□ 0.05
RAB11FIP4-210ENST00000585058 GDPD2Q9HCC8 539 aa15.35■□□□□ 0.05
RAB11FIP4-210ENST00000585058 LIMCH1Q9UPQ0 1083 aa15.35■□□□□ 0.05
RAB11FIP4-210ENST00000585058 SYNJ2O15056 1496 aa15.34■□□□□ 0.05
RAB11FIP4-210ENST00000585058 CCDC194A0A1B0GVG4 234 aa15.34■□□□□ 0.05
RAB11FIP4-210ENST00000585058 NF2P35240 595 aa15.34■□□□□ 0.05
RAB11FIP4-210ENST00000585058 SLC52A1Q9NWF4 448 aa15.34■□□□□ 0.05
RAB11FIP4-210ENST00000585058 CTAGE5O15320 804 aa15.34■□□□□ 0.05
RAB11FIP4-210ENST00000585058 LIG1P18858 919 aa15.34■□□□□ 0.05
RAB11FIP4-210ENST00000585058 HLTFQ14527 1009 aaKnown RBP eCLIP15.34■□□□□ 0.05
RAB11FIP4-210ENST00000585058 DNAI2Q9GZS0 605 aa15.34■□□□□ 0.05
RAB11FIP4-210ENST00000585058 CUL7Q14999 1698 aa15.34■□□□□ 0.05
RAB11FIP4-210ENST00000585058 STAMBPO95630 424 aa15.34■□□□□ 0.05
RAB11FIP4-210ENST00000585058 TAF7Q15545 349 aaPredicted RBP15.34■□□□□ 0.05
RAB11FIP4-210ENST00000585058 C20orf194Q5TEA3 1177 aa15.34■□□□□ 0.05
RAB11FIP4-210ENST00000585058 TMC6Q7Z403 805 aa15.34■□□□□ 0.05
RAB11FIP4-210ENST00000585058 IFIT3O14879 490 aaKnown RBP15.34■□□□□ 0.05
RAB11FIP4-210ENST00000585058 TNPO1Q92973 898 aaKnown RBP15.34■□□□□ 0.05
RAB11FIP4-210ENST00000585058 ZNF652Q9Y2D9 606 aa15.34■□□□□ 0.05
RAB11FIP4-210ENST00000585058 BIVM-ERCC5R4GMW8 1640 aa15.34■□□□□ 0.05
RAB11FIP4-210ENST00000585058 MTIF2P46199 727 aaKnown RBP15.34■□□□□ 0.05
RAB11FIP4-210ENST00000585058 NUDT16Q96DE0 195 aaKnown RBP15.34■□□□□ 0.05
RAB11FIP4-210ENST00000585058 IFIT5Q13325 482 aaKnown RBP15.33■□□□□ 0.05
RAB11FIP4-210ENST00000585058 PLEKHH1Q9ULM0 1364 aa15.33■□□□□ 0.04
RAB11FIP4-210ENST00000585058 SPTY2D1Q68D10 685 aaPredicted RBP15.33■□□□□ 0.04
RAB11FIP4-210ENST00000585058 CTNNA2P26232 953 aa15.33■□□□□ 0.04
RAB11FIP4-210ENST00000585058 USHBP1Q8N6Y0 703 aa15.33■□□□□ 0.04
RAB11FIP4-210ENST00000585058 CUL5Q93034 780 aa15.33■□□□□ 0.04
RAB11FIP4-210ENST00000585058 TMOD3Q9NYL9 352 aa15.33■□□□□ 0.04
RAB11FIP4-210ENST00000585058 TMCO5BA8MYB1 307 aa15.33■□□□□ 0.04
RAB11FIP4-210ENST00000585058 RARSP54136 660 aaKnown RBP15.33■□□□□ 0.04
RAB11FIP4-210ENST00000585058 PIP4K2BP78356 416 aa15.33■□□□□ 0.04
RAB11FIP4-210ENST00000585058 TFIP11Q9UBB9 837 aaKnown RBP15.33■□□□□ 0.04
RAB11FIP4-210ENST00000585058 CCDC150Q8NCX0 1101 aa15.32■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 112.7 ms