RNA–Protein interactions for RNA: ENST00000584424.1

TTC39C-210, Transcript of tetratricopeptide repeat domain 39C, humanhuman

TSL 2

Gene TTC39C, Length 739 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39C-210ENST00000584424 SLFNL1Q499Z3 407 aa8.55□□□□□ -1.04
TTC39C-210ENST00000584424 APBB1O00213 710 aa8.54□□□□□ -1.04
TTC39C-210ENST00000584424 MAPTP10636 758 aaKnown RBP8.54□□□□□ -1.04
TTC39C-210ENST00000584424 ATP4AP20648 1035 aa8.54□□□□□ -1.04
TTC39C-210ENST00000584424 PCBP4P57723 403 aaKnown RBP8.54□□□□□ -1.04
TTC39C-210ENST00000584424 ZMYM1Q5SVZ6 1142 aa8.54□□□□□ -1.04
TTC39C-210ENST00000584424 KLF15Q9UIH9 416 aa8.54□□□□□ -1.04
TTC39C-210ENST00000584424 A0A1W2PNR3 127 aa8.53□□□□□ -1.04
TTC39C-210ENST00000584424 GATA4P43694 442 aa8.53□□□□□ -1.04
TTC39C-210ENST00000584424 GDF10P55107 478 aa8.53□□□□□ -1.04
TTC39C-210ENST00000584424 NLRP8Q86W28 1048 aa8.53□□□□□ -1.04
TTC39C-210ENST00000584424 FCHSD1Q86WN1 690 aa8.53□□□□□ -1.04
TTC39C-210ENST00000584424 PLVAPQ9BX97 442 aa8.53□□□□□ -1.04
TTC39C-210ENST00000584424 NIFKQ9BYG3 293 aaKnown RBP8.53□□□□□ -1.04
TTC39C-210ENST00000584424 PRR12Q9ULL5 1215 aa8.53□□□□□ -1.04
TTC39C-210ENST00000584424 TNP2Q05952 138 aa8.52□□□□□ -1.05
TTC39C-210ENST00000584424 C1orf216Q8TAB5 229 aa8.52□□□□□ -1.05
TTC39C-210ENST00000584424 TRIM11Q96F44 468 aa8.52□□□□□ -1.05
TTC39C-210ENST00000584424 SERTAD1Q9UHV2 236 aa8.52□□□□□ -1.05
TTC39C-210ENST00000584424 INHAP05111 366 aa8.51□□□□□ -1.05
TTC39C-210ENST00000584424 EIF4G2P78344 907 aaKnown RBP eCLIP8.51□□□□□ -1.05
TTC39C-210ENST00000584424 PHTF2Q8N3S3 785 aa8.51□□□□□ -1.05
TTC39C-210ENST00000584424 SIRT1Q96EB6 747 aa8.51□□□□□ -1.05
TTC39C-210ENST00000584424 HCN2Q9UL51 889 aa8.51□□□□□ -1.05
TTC39C-210ENST00000584424 GJA3Q9Y6H8 435 aa8.51□□□□□ -1.05
TTC39C-210ENST00000584424 SCO2A0A1W2PP80 73 aa8.5□□□□□ -1.05
TTC39C-210ENST00000584424 SCNN1DP51172 638 aa8.5□□□□□ -1.05
TTC39C-210ENST00000584424 NBPF1Q3BBV0 1214 aa8.5□□□□□ -1.05
TTC39C-210ENST00000584424 TBC1D2BQ9UPU7 963 aa8.5□□□□□ -1.05
TTC39C-210ENST00000584424 SOCS7O14512 581 aa8.49□□□□□ -1.05
TTC39C-210ENST00000584424 SPATA31C1P0DKV0 1188 aa8.49□□□□□ -1.05
TTC39C-210ENST00000584424 TATP17735 454 aaPredicted RBP8.48□□□□□ -1.05
TTC39C-210ENST00000584424 SMTNP53814 917 aa8.48□□□□□ -1.05
TTC39C-210ENST00000584424 FAM182BQ5T319 152 aa8.48□□□□□ -1.05
TTC39C-210ENST00000584424 AVENQ9NQS1 362 aaPredicted RBP8.48□□□□□ -1.05
TTC39C-210ENST00000584424 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.47□□□□□ -1.05
TTC39C-210ENST00000584424 ZNF468Q5VIY5 522 aaPredicted RBP8.47□□□□□ -1.05
TTC39C-210ENST00000584424 BICDL1Q6ZP65 573 aa8.47□□□□□ -1.05
TTC39C-210ENST00000584424 CABP1Q9NZU7 370 aa8.47□□□□□ -1.05
TTC39C-210ENST00000584424 ZIC5Q96T25 663 aa8.46□□□□□ -1.06
TTC39C-210ENST00000584424 KRTAP9-2Q9BYQ4 174 aa8.46□□□□□ -1.06
TTC39C-210ENST00000584424 MARK1Q9P0L2 795 aa8.46□□□□□ -1.06
TTC39C-210ENST00000584424 PARP3Q9Y6F1 533 aa8.46□□□□□ -1.06
TTC39C-210ENST00000584424 ALAS2P22557 587 aa8.45□□□□□ -1.06
TTC39C-210ENST00000584424 STRN4Q9NRL3 753 aa8.45□□□□□ -1.06
TTC39C-210ENST00000584424 APBA3O96018 575 aa8.44□□□□□ -1.06
TTC39C-210ENST00000584424 VAC14Q08AM6 782 aa8.44□□□□□ -1.06
TTC39C-210ENST00000584424 RSPO4Q2I0M5 234 aaPredicted RBP8.44□□□□□ -1.06
TTC39C-210ENST00000584424 PRRT3Q5FWE3 981 aa8.44□□□□□ -1.06
TTC39C-210ENST00000584424 PRM3Q9NNZ6 103 aa8.44□□□□□ -1.06
TTC39C-210ENST00000584424 USP3Q9Y6I4 520 aa8.44□□□□□ -1.06
TTC39C-210ENST00000584424 ELOA3CA0A087WX78 387 aaPredicted RBP8.43□□□□□ -1.06
TTC39C-210ENST00000584424 KRTAP9-6A0A140TA67 174 aa8.43□□□□□ -1.06
TTC39C-210ENST00000584424 A6NJY4 79 aa8.43□□□□□ -1.06
TTC39C-210ENST00000584424 ELOA3DA6NLF2 546 aaPredicted RBP8.43□□□□□ -1.06
TTC39C-210ENST00000584424 FAM229AH3BQW9 127 aa8.43□□□□□ -1.06
TTC39C-210ENST00000584424 FAM157BP0CG42 384 aa8.43□□□□□ -1.06
TTC39C-210ENST00000584424 ELOA3BQ3SY89 546 aa8.43□□□□□ -1.06
TTC39C-210ENST00000584424 SYT9Q86SS6 491 aa8.43□□□□□ -1.06
TTC39C-210ENST00000584424 ELOA3Q8NG57 546 aa8.43□□□□□ -1.06
TTC39C-210ENST00000584424 TPSG1Q9NRR2 321 aa8.43□□□□□ -1.06
TTC39C-210ENST00000584424 SPDYE3A6NKU9 549 aa8.42□□□□□ -1.06
TTC39C-210ENST00000584424 IRF5Q13568 498 aa8.42□□□□□ -1.06
TTC39C-210ENST00000584424 PLPP7Q8NBV4 271 aa8.42□□□□□ -1.06
TTC39C-210ENST00000584424 ZDHHC3Q9NYG2 299 aa8.42□□□□□ -1.06
TTC39C-210ENST00000584424 CHIC2Q9UKJ5 165 aa8.42□□□□□ -1.06
TTC39C-210ENST00000584424 TMEM229AB2RXF0 380 aa8.41□□□□□ -1.06
TTC39C-210ENST00000584424 CDK2AP1O14519 115 aa8.41□□□□□ -1.06
TTC39C-210ENST00000584424 FOXD4L6Q3SYB3 417 aaPredicted RBP8.4□□□□□ -1.06
TTC39C-210ENST00000584424 NKAPLQ5M9Q1 402 aa8.4□□□□□ -1.06
TTC39C-210ENST00000584424 FOXD4L3Q6VB84 417 aaPredicted RBP8.4□□□□□ -1.06
TTC39C-210ENST00000584424 ZNF295-AS1Q8N0V1 137 aa8.4□□□□□ -1.06
TTC39C-210ENST00000584424 BCANQ96GW7 911 aa8.4□□□□□ -1.06
TTC39C-210ENST00000584424 IQSEC3Q9UPP2 1182 aaPredicted RBP8.4□□□□□ -1.06
TTC39C-210ENST00000584424 M0R082 166 aa8.39□□□□□ -1.07
TTC39C-210ENST00000584424 EFSO43281 561 aa8.39□□□□□ -1.07
TTC39C-210ENST00000584424 DYRK3O43781 588 aa8.39□□□□□ -1.07
TTC39C-210ENST00000584424 TXLNAP40222 546 aa8.39□□□□□ -1.07
TTC39C-210ENST00000584424 MTFR1Q15390 333 aa8.39□□□□□ -1.07
TTC39C-210ENST00000584424 MAP7D1Q3KQU3 841 aa8.39□□□□□ -1.07
TTC39C-210ENST00000584424 LRRC69Q6ZNQ3 347 aa8.39□□□□□ -1.07
TTC39C-210ENST00000584424 ZNF417Q8TAU3 575 aa8.39□□□□□ -1.07
TTC39C-210ENST00000584424 SLC4A9Q96Q91 983 aa8.39□□□□□ -1.07
TTC39C-210ENST00000584424 ZNF587Q96SQ5 575 aaPredicted RBP8.39□□□□□ -1.07
TTC39C-210ENST00000584424 TRIM28Q13263 835 aaKnown RBP8.38□□□□□ -1.07
TTC39C-210ENST00000584424 LAMC2Q13753 1193 aa8.38□□□□□ -1.07
TTC39C-210ENST00000584424 SAMD5Q5TGI4 173 aa8.38□□□□□ -1.07
TTC39C-210ENST00000584424 C8orf86Q6ZUL3 223 aa8.38□□□□□ -1.07
TTC39C-210ENST00000584424 NEUROD4Q9HD90 331 aa8.38□□□□□ -1.07
TTC39C-210ENST00000584424 ABL2P42684 1182 aa8.37□□□□□ -1.07
TTC39C-210ENST00000584424 GRIK4Q16099 956 aa8.37□□□□□ -1.07
TTC39C-210ENST00000584424 ZFP64Q9NPA5 681 aa8.37□□□□□ -1.07
TTC39C-210ENST00000584424 BRPF1P55201 1214 aaPredicted RBP8.36□□□□□ -1.07
TTC39C-210ENST00000584424 SEMA3FQ13275 785 aa8.36□□□□□ -1.07
TTC39C-210ENST00000584424 PRSS36Q5K4E3 855 aa8.36□□□□□ -1.07
TTC39C-210ENST00000584424 SIN3BO75182 1162 aa8.35□□□□□ -1.07
TTC39C-210ENST00000584424 SFSWAPQ12872 951 aaKnown RBP8.35□□□□□ -1.07
TTC39C-210ENST00000584424 NBPF11Q86T75 865 aa8.35□□□□□ -1.07
TTC39C-210ENST00000584424 L3MBTL2Q969R5 705 aa8.35□□□□□ -1.07
TTC39C-210ENST00000584424 NACC1Q96RE7 527 aa8.35□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms