RNA–Protein interactions for RNA: ENST00000584400.5

SMARCD2-210, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2, humanhuman

TSL 3

Gene SMARCD2, Length 1,017 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD2-210ENST00000584400 CCDC146Q8IYE0 955 aa35.76■■■■□ 3.32
SMARCD2-210ENST00000584400 ZBTB1Q9Y2K1 713 aa35.76■■■■□ 3.32
SMARCD2-210ENST00000584400 SNRPA1P09661 255 aaKnown RBP35.74■■■■□ 3.31
SMARCD2-210ENST00000584400 GYS1P13807 737 aa35.74■■■■□ 3.31
SMARCD2-210ENST00000584400 CD2APQ9Y5K6 639 aa35.74■■■■□ 3.31
SMARCD2-210ENST00000584400 ZPR1O75312 459 aa35.73■■■■□ 3.31
SMARCD2-210ENST00000584400 USP42Q9H9J4 1324 aaKnown RBP35.73■■■■□ 3.31
SMARCD2-210ENST00000584400 MYH14Q7Z406 1995 aaKnown RBP35.73■■■■□ 3.31
SMARCD2-210ENST00000584400 CANXP27824 592 aaKnown RBP35.72■■■■□ 3.31
SMARCD2-210ENST00000584400 NPM2Q86SE8 214 aaKnown RBP35.72■■■■□ 3.31
SMARCD2-210ENST00000584400 MMP10P09238 476 aa35.71■■■■□ 3.31
SMARCD2-210ENST00000584400 A0A087WZG4 1122 aa35.7■■■■□ 3.31
SMARCD2-210ENST00000584400 COL15A1P39059 1388 aa35.7■■■■□ 3.31
SMARCD2-210ENST00000584400 THUMPD2Q9BTF0 503 aaKnown RBP35.7■■■■□ 3.31
SMARCD2-210ENST00000584400 MIS18AQ9NYP9 233 aa35.68■■■■□ 3.3
SMARCD2-210ENST00000584400 IL6STP40189 918 aaPredicted RBP35.67■■■■□ 3.3
SMARCD2-210ENST00000584400 NEUROD2Q15784 382 aa35.67■■■■□ 3.3
SMARCD2-210ENST00000584400 SRP68Q9UHB9 627 aaKnown RBP35.67■■■■□ 3.3
SMARCD2-210ENST00000584400 NARFQ9UHQ1 456 aa35.67■■■■□ 3.3
SMARCD2-210ENST00000584400 DLG5Q8TDM6 1919 aa35.67■■■■□ 3.3
SMARCD2-210ENST00000584400 EIF5P55010 431 aaKnown RBP35.66■■■■□ 3.3
SMARCD2-210ENST00000584400 BABAM1Q9NWV8 329 aa35.66■■■■□ 3.3
SMARCD2-210ENST00000584400 RRP7AQ9Y3A4 280 aaKnown RBP35.66■■■■□ 3.3
SMARCD2-210ENST00000584400 PARP3Q9Y6F1 533 aa35.66■■■■□ 3.3
SMARCD2-210ENST00000584400 USPL1Q5W0Q7 1092 aa35.64■■■■□ 3.3
SMARCD2-210ENST00000584400 USP16Q9Y5T5 823 aa35.64■■■■□ 3.3
SMARCD2-210ENST00000584400 C4AP0C0L4 1744 aa35.63■■■■□ 3.29
SMARCD2-210ENST00000584400 A1BGP04217 495 aa35.62■■■■□ 3.29
SMARCD2-210ENST00000584400 FKBP8Q14318 412 aa35.62■■■■□ 3.29
SMARCD2-210ENST00000584400 NLGN2Q8NFZ4 835 aa35.62■■■■□ 3.29
SMARCD2-210ENST00000584400 TSPYL4Q9UJ04 414 aa35.62■■■■□ 3.29
SMARCD2-210ENST00000584400 ZNF330Q9Y3S2 320 aaPredicted RBP35.61■■■■□ 3.29
SMARCD2-210ENST00000584400 EIF4A1P60842 406 aaKnown RBP35.6■■■■□ 3.29
SMARCD2-210ENST00000584400 MRS2Q9HD23 443 aa35.6■■■■□ 3.29
SMARCD2-210ENST00000584400 GPR162Q16538 588 aa35.59■■■■□ 3.29
SMARCD2-210ENST00000584400 PRAMEF22A3QJZ6 481 aa35.58■■■■□ 3.29
SMARCD2-210ENST00000584400 GIGYF1O75420 1035 aaPredicted RBP35.56■■■■□ 3.28
SMARCD2-210ENST00000584400 TRIM35Q9UPQ4 493 aa35.56■■■■□ 3.28
SMARCD2-210ENST00000584400 CCDC184Q52MB2 194 aa35.55■■■■□ 3.28
SMARCD2-210ENST00000584400 APAF1O14727 1248 aa35.54■■■■□ 3.28
SMARCD2-210ENST00000584400 TM4SF1P30408 202 aa35.54■■■■□ 3.28
SMARCD2-210ENST00000584400 PELP1Q8IZL8 1130 aaKnown RBP35.54■■■■□ 3.28
SMARCD2-210ENST00000584400 KDM3BQ7LBC6 1761 aa35.53■■■■□ 3.28
SMARCD2-210ENST00000584400 TGFB2P61812 414 aa35.52■■■■□ 3.28
SMARCD2-210ENST00000584400 TBC1D2BQ9UPU7 963 aa35.52■■■■□ 3.28
SMARCD2-210ENST00000584400 CALD1Q05682 793 aaKnown RBP35.51■■■■□ 3.28
SMARCD2-210ENST00000584400 DZIP3Q86Y13 1208 aaKnown RBP35.5■■■■□ 3.27
SMARCD2-210ENST00000584400 BCL2L12Q9HB09 334 aa35.5■■■■□ 3.27
SMARCD2-210ENST00000584400 POLRMTO00411 1230 aaKnown RBP35.49■■■■□ 3.27
SMARCD2-210ENST00000584400 DDR1Q08345 913 aa35.49■■■■□ 3.27
SMARCD2-210ENST00000584400 NFIXQ14938 502 aa35.49■■■■□ 3.27
SMARCD2-210ENST00000584400 C10orf71Q711Q0 1435 aa35.49■■■■□ 3.27
SMARCD2-210ENST00000584400 CHL1O00533 1208 aa35.48■■■■□ 3.27
SMARCD2-210ENST00000584400 GRIN3BO60391 1043 aa35.48■■■■□ 3.27
SMARCD2-210ENST00000584400 LAS1LQ9Y4W2 734 aaKnown RBP35.48■■■■□ 3.27
SMARCD2-210ENST00000584400 PIP4K2AP48426 406 aaPredicted RBP35.46■■■■□ 3.27
SMARCD2-210ENST00000584400 NBPF26B4DH59 902 aa35.45■■■■□ 3.27
SMARCD2-210ENST00000584400 NBPF10Q6P3W6 841 aaKnown RBP35.45■■■■□ 3.27
SMARCD2-210ENST00000584400 NBPF15Q8N660 670 aa35.45■■■■□ 3.27
SMARCD2-210ENST00000584400 CFAP44Q96MT7 982 aa35.45■■■■□ 3.27
SMARCD2-210ENST00000584400 ZNF652Q9Y2D9 606 aa35.45■■■■□ 3.27
SMARCD2-210ENST00000584400 ERBB4Q15303 1308 aa35.44■■■■□ 3.26
SMARCD2-210ENST00000584400 CAMTA2O94983 1202 aa35.44■■■■□ 3.26
SMARCD2-210ENST00000584400 RGL2O15211 777 aa35.43■■■■□ 3.26
SMARCD2-210ENST00000584400 SERPINB2P05120 415 aa35.42■■■■□ 3.26
SMARCD2-210ENST00000584400 CLEC4GQ6UXB4 293 aa35.42■■■■□ 3.26
SMARCD2-210ENST00000584400 LAMB4A4D0S4 1761 aa35.41■■■■□ 3.26
SMARCD2-210ENST00000584400 BICDL1Q6ZP65 573 aa35.41■■■■□ 3.26
SMARCD2-210ENST00000584400 YY1P25490 414 aa35.4■■■■□ 3.26
SMARCD2-210ENST00000584400 TBC1D9BQ66K14 1250 aa35.4■■■■□ 3.26
SMARCD2-210ENST00000584400 SETDB2Q96T68 719 aa35.4■■■■□ 3.26
SMARCD2-210ENST00000584400 PXDNLA1KZ92 1463 aa35.38■■■■□ 3.25
SMARCD2-210ENST00000584400 YBX3P16989 372 aaKnown RBP eCLIP35.38■■■■□ 3.25
SMARCD2-210ENST00000584400 GNAI1P63096 354 aa35.38■■■■□ 3.25
SMARCD2-210ENST00000584400 IFT57Q9NWB7 429 aa35.38■■■■□ 3.25
SMARCD2-210ENST00000584400 CARMIL3Q8ND23 1372 aa35.38■■■■□ 3.25
SMARCD2-210ENST00000584400 EIF2S2P20042 333 aaKnown RBP35.37■■■■□ 3.25
SMARCD2-210ENST00000584400 NCBP3Q53F19 620 aaKnown RBP35.37■■■■□ 3.25
SMARCD2-210ENST00000584400 SCN7AQ01118 1682 aa35.37■■■■□ 3.25
SMARCD2-210ENST00000584400 A0A0G2JLW4 131 aa35.36■■■■□ 3.25
SMARCD2-210ENST00000584400 CCDC27Q2M243 656 aa35.36■■■■□ 3.25
SMARCD2-210ENST00000584400 KIF13BQ9NQT8 1826 aa35.36■■■■□ 3.25
SMARCD2-210ENST00000584400 MYL6BP14649 208 aa35.35■■■■□ 3.25
SMARCD2-210ENST00000584400 KIF6Q6ZMV9 814 aa35.35■■■■□ 3.25
SMARCD2-210ENST00000584400 HOXB7P09629 217 aa35.34■■■■□ 3.25
SMARCD2-210ENST00000584400 DPEP1P16444 411 aa35.34■■■■□ 3.25
SMARCD2-210ENST00000584400 NGEFQ8N5V2 710 aa35.34■■■■□ 3.25
SMARCD2-210ENST00000584400 ERVV-1B6SEH8 477 aa35.32■■■■□ 3.24
SMARCD2-210ENST00000584400 NPHP1O15259 732 aa35.32■■■■□ 3.24
SMARCD2-210ENST00000584400 ZNF853P0CG23 659 aa35.32■■■■□ 3.24
SMARCD2-210ENST00000584400 MBIPQ9NS73 344 aa35.32■■■■□ 3.24
SMARCD2-210ENST00000584400 PIM2Q9P1W9 311 aa35.3■■■■□ 3.24
SMARCD2-210ENST00000584400 WWC3Q9ULE0 1092 aa35.29■■■■□ 3.24
SMARCD2-210ENST00000584400 PDZRN3Q9UPQ7 1066 aa35.29■■■■□ 3.24
SMARCD2-210ENST00000584400 FAM9BQ8IZU0 186 aa35.28■■■■□ 3.24
SMARCD2-210ENST00000584400 CNBD1Q8NA66 436 aa35.28■■■■□ 3.24
SMARCD2-210ENST00000584400 BCS1LQ9Y276 419 aa35.28■■■■□ 3.24
SMARCD2-210ENST00000584400 MAP3K15Q6ZN16 1313 aa35.28■■■■□ 3.24
SMARCD2-210ENST00000584400 NIP7Q9Y221 180 aaKnown RBP eCLIP35.27■■■■□ 3.24
SMARCD2-210ENST00000584400 BCORQ6W2J9 1755 aa35.27■■■■□ 3.24
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms