RNA–Protein interactions for RNA: ENST00000583965.5

CDRT1-207, CMT1A duplicated region transcript 1, humanhuman

TSL 1 (best) BASIC

Gene CDRT1, Length 562 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT1-207ENST00000583965 CCDC30Q5VVM6 783 aa15□□□□□ -0.01
CDRT1-207ENST00000583965 DNAJC10Q8IXB1 793 aa15□□□□□ -0.01
CDRT1-207ENST00000583965 UPF1Q92900 1129 aaKnown RBP eCLIP15□□□□□ -0.01
CDRT1-207ENST00000583965 USP16Q9Y5T5 823 aa15□□□□□ -0.01
CDRT1-207ENST00000583965 QSER1Q2KHR3 1735 aa15□□□□□ -0.01
CDRT1-207ENST00000583965 TUBGCP6Q96RT7 1819 aa14.99□□□□□ -0.01
CDRT1-207ENST00000583965 PRAMEF22A3QJZ6 481 aa14.99□□□□□ -0.01
CDRT1-207ENST00000583965 CYP19A1P11511 503 aaPredicted RBP14.99□□□□□ -0.01
CDRT1-207ENST00000583965 ITPK1Q13572 414 aa14.99□□□□□ -0.01
CDRT1-207ENST00000583965 ALDH1L2Q3SY69 923 aa14.99□□□□□ -0.01
CDRT1-207ENST00000583965 CAMKK2Q96RR4 588 aa14.99□□□□□ -0.01
CDRT1-207ENST00000583965 CNTNAP4Q9C0A0 1308 aa14.98□□□□□ -0.01
CDRT1-207ENST00000583965 EIF2S2P20042 333 aaKnown RBP14.98□□□□□ -0.01
CDRT1-207ENST00000583965 RC3H1Q5TC82 1133 aaKnown RBP14.98□□□□□ -0.01
CDRT1-207ENST00000583965 PROM2Q8N271 834 aa14.98□□□□□ -0.01
CDRT1-207ENST00000583965 LRRC4BQ9NT99 713 aa14.98□□□□□ -0.01
CDRT1-207ENST00000583965 EN1Q05925 392 aaPredicted RBP14.97□□□□□ -0.01
CDRT1-207ENST00000583965 LINC00116Q8NCU8 138 aa14.97□□□□□ -0.01
CDRT1-207ENST00000583965 STK31Q9BXU1 1019 aa14.97□□□□□ -0.01
CDRT1-207ENST00000583965 DBF4Q9UBU7 674 aaPredicted RBP14.97□□□□□ -0.01
CDRT1-207ENST00000583965 CRKLP46109 303 aaKnown RBP14.96□□□□□ -0.01
CDRT1-207ENST00000583965 RARSP54136 660 aaKnown RBP14.96□□□□□ -0.01
CDRT1-207ENST00000583965 EZH2Q15910 746 aaKnown RBP14.96□□□□□ -0.01
CDRT1-207ENST00000583965 DDX21Q9NR30 783 aaKnown RBP eCLIP14.96□□□□□ -0.01
CDRT1-207ENST00000583965 CCDC87Q9NVE4 849 aa14.96□□□□□ -0.01
CDRT1-207ENST00000583965 KCNQ4P56696 695 aa14.95□□□□□ -0.02
CDRT1-207ENST00000583965 DEFB132Q7Z7B7 95 aa14.95□□□□□ -0.02
CDRT1-207ENST00000583965 NECTIN2Q92692 538 aa14.95□□□□□ -0.02
CDRT1-207ENST00000583965 RCAN3Q9UKA8 241 aa14.95□□□□□ -0.02
CDRT1-207ENST00000583965 C4AP0C0L4 1744 aa14.95□□□□□ -0.02
CDRT1-207ENST00000583965 NUP98P52948 1817 aa14.94□□□□□ -0.02
CDRT1-207ENST00000583965 A1BGP04217 495 aa14.94□□□□□ -0.02
CDRT1-207ENST00000583965 BRPF1P55201 1214 aaPredicted RBP14.94□□□□□ -0.02
CDRT1-207ENST00000583965 HYPKQ9NX55 129 aa14.94□□□□□ -0.02
CDRT1-207ENST00000583965 CHPF2Q9P2E5 772 aa14.94□□□□□ -0.02
CDRT1-207ENST00000583965 BCORQ6W2J9 1755 aa14.93□□□□□ -0.02
CDRT1-207ENST00000583965 ARFGEF2Q9Y6D5 1785 aa14.93□□□□□ -0.02
CDRT1-207ENST00000583965 IL6STP40189 918 aaPredicted RBP14.93□□□□□ -0.02
CDRT1-207ENST00000583965 PDIA6Q15084 440 aa14.93□□□□□ -0.02
CDRT1-207ENST00000583965 INTS5Q6P9B9 1019 aaKnown RBP14.93□□□□□ -0.02
CDRT1-207ENST00000583965 SSH1Q8WYL5 1049 aa14.93□□□□□ -0.02
CDRT1-207ENST00000583965 SMC4Q9NTJ3 1288 aa14.93□□□□□ -0.02
CDRT1-207ENST00000583965 ZBTB1Q9Y2K1 713 aa14.93□□□□□ -0.02
CDRT1-207ENST00000583965 N4BP2Q86UW6 1770 aaPredicted RBP14.93□□□□□ -0.02
CDRT1-207ENST00000583965 NBPF26B4DH59 902 aa14.92□□□□□ -0.02
CDRT1-207ENST00000583965 RPS6KA4O75676 772 aa14.92□□□□□ -0.02
CDRT1-207ENST00000583965 SLC4A2P04920 1241 aa14.92□□□□□ -0.02
CDRT1-207ENST00000583965 NBPF14Q5TI25 921 aa14.92□□□□□ -0.02
CDRT1-207ENST00000583965 NBPF10Q6P3W6 841 aaKnown RBP14.92□□□□□ -0.02
CDRT1-207ENST00000583965 MRPL50Q8N5N7 158 aaKnown RBP14.92□□□□□ -0.02
CDRT1-207ENST00000583965 NBPF15Q8N660 670 aa14.92□□□□□ -0.02
CDRT1-207ENST00000583965 AK7Q96M32 723 aa14.92□□□□□ -0.02
CDRT1-207ENST00000583965 KIF16BQ96L93 1317 aa14.92□□□□□ -0.02
CDRT1-207ENST00000583965 ANKRD36CQ5JPF3 1778 aa14.91□□□□□ -0.02
CDRT1-207ENST00000583965 CANXP27824 592 aaKnown RBP14.91□□□□□ -0.02
CDRT1-207ENST00000583965 EIF5P55010 431 aaKnown RBP14.91□□□□□ -0.02
CDRT1-207ENST00000583965 NPM2Q86SE8 214 aaKnown RBP14.91□□□□□ -0.02
CDRT1-207ENST00000583965 RTCBQ9Y3I0 505 aaKnown RBP14.91□□□□□ -0.02
CDRT1-207ENST00000583965 SCN7AQ01118 1682 aa14.9□□□□□ -0.02
CDRT1-207ENST00000583965 TCERG1O14776 1098 aaKnown RBP14.9□□□□□ -0.02
CDRT1-207ENST00000583965 GNPATO15228 680 aa14.9□□□□□ -0.02
CDRT1-207ENST00000583965 MYL6BP14649 208 aa14.9□□□□□ -0.02
CDRT1-207ENST00000583965 ADRA2BP18089 450 aa14.9□□□□□ -0.02
CDRT1-207ENST00000583965 PROSER3Q2NL68 480 aa14.9□□□□□ -0.02
CDRT1-207ENST00000583965 LRP10Q7Z4F1 713 aa14.9□□□□□ -0.02
CDRT1-207ENST00000583965 AKT1S1Q96B36 256 aa14.9□□□□□ -0.02
CDRT1-207ENST00000583965 AFDNP55196 1824 aaKnown RBP14.89□□□□□ -0.03
CDRT1-207ENST00000583965 COL15A1P39059 1388 aa14.89□□□□□ -0.03
CDRT1-207ENST00000583965 A0A087WZG4 1122 aa14.89□□□□□ -0.03
CDRT1-207ENST00000583965 ANXA1P04083 346 aa14.89□□□□□ -0.03
CDRT1-207ENST00000583965 SSFA2P28290 1259 aa14.89□□□□□ -0.03
CDRT1-207ENST00000583965 BCL2L13Q9BXK5 485 aa14.89□□□□□ -0.03
CDRT1-207ENST00000583965 PTPRCP08575 1304 aa14.89□□□□□ -0.03
CDRT1-207ENST00000583965 IPO8O15397 1037 aaKnown RBP14.88□□□□□ -0.03
CDRT1-207ENST00000583965 BCAR3O75815 825 aa14.88□□□□□ -0.03
CDRT1-207ENST00000583965 PIP4K2AP48426 406 aaPredicted RBP14.88□□□□□ -0.03
CDRT1-207ENST00000583965 FLIIQ13045 1269 aa14.88□□□□□ -0.03
CDRT1-207ENST00000583965 FLAD1Q8NFF5 587 aa14.88□□□□□ -0.03
CDRT1-207ENST00000583965 ARHGAP45Q92619 1136 aa14.88□□□□□ -0.03
CDRT1-207ENST00000583965 STK32BQ9NY57 414 aa14.88□□□□□ -0.03
CDRT1-207ENST00000583965 DDX58O95786 925 aaKnown RBP14.87□□□□□ -0.03
CDRT1-207ENST00000583965 SLC15A2Q16348 729 aa14.87□□□□□ -0.03
CDRT1-207ENST00000583965 ZNF827Q17R98 1081 aa14.87□□□□□ -0.03
CDRT1-207ENST00000583965 COPS6Q7L5N1 327 aa14.87□□□□□ -0.03
CDRT1-207ENST00000583965 GOLGA6L2Q8N9W4 650 aaPredicted RBP14.87□□□□□ -0.03
CDRT1-207ENST00000583965 XAGE3Q8WTP9 111 aa14.87□□□□□ -0.03
CDRT1-207ENST00000583965 PHAXQ9H814 394 aaKnown RBP14.87□□□□□ -0.03
CDRT1-207ENST00000583965 TFCP2L1Q9NZI6 479 aa14.87□□□□□ -0.03
CDRT1-207ENST00000583965 RGL2O15211 777 aa14.86□□□□□ -0.03
CDRT1-207ENST00000583965 TRAPPC3LQ5T215 181 aa14.86□□□□□ -0.03
CDRT1-207ENST00000583965 KIF6Q6ZMV9 814 aa14.86□□□□□ -0.03
CDRT1-207ENST00000583965 G2E3Q7L622 706 aa14.86□□□□□ -0.03
CDRT1-207ENST00000583965 ZNF330Q9Y3S2 320 aaPredicted RBP14.86□□□□□ -0.03
CDRT1-207ENST00000583965 AIMP1Q12904 312 aaKnown RBP14.85□□□□□ -0.03
CDRT1-207ENST00000583965 FKBP5Q13451 457 aaPredicted RBP14.85□□□□□ -0.03
CDRT1-207ENST00000583965 DZIP3Q86Y13 1208 aaKnown RBP14.85□□□□□ -0.03
CDRT1-207ENST00000583965 PLBD2Q8NHP8 589 aa14.85□□□□□ -0.03
CDRT1-207ENST00000583965 API5Q9BZZ5 524 aaKnown RBP14.85□□□□□ -0.03
CDRT1-207ENST00000583965 ANO8Q9HCE9 1232 aaPredicted RBP14.85□□□□□ -0.03
CDRT1-207ENST00000583965 NOB1Q9ULX3 412 aaKnown RBP14.85□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms