RNA–Protein interactions for RNA: ENST00000583160.5

COPS3-217, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 5

Gene COPS3, Length 365 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-217ENST00000583160 NBPF1Q3BBV0 1214 aa8.69□□□□□ -1.02
COPS3-217ENST00000583160 TBCELQ5QJ74 424 aa8.69□□□□□ -1.02
COPS3-217ENST00000583160 SLC9A9Q8IVB4 645 aa8.69□□□□□ -1.02
COPS3-217ENST00000583160 ZNF594Q96JF6 807 aaPredicted RBP8.69□□□□□ -1.02
COPS3-217ENST00000583160 ADAMTS8Q9UP79 889 aa8.69□□□□□ -1.02
COPS3-217ENST00000583160 ARHGEF15O94989 841 aa8.68□□□□□ -1.02
COPS3-217ENST00000583160 CELA2BP08218 269 aaPredicted RBP8.68□□□□□ -1.02
COPS3-217ENST00000583160 ARSJQ5FYB0 599 aaPredicted RBP8.68□□□□□ -1.02
COPS3-217ENST00000583160 SIX5Q8N196 739 aa8.68□□□□□ -1.02
COPS3-217ENST00000583160 ZDHHC1Q8WTX9 485 aa8.68□□□□□ -1.02
COPS3-217ENST00000583160 ZDHHC3Q9NYG2 299 aa8.68□□□□□ -1.02
COPS3-217ENST00000583160 NSFL1CQ9UNZ2 370 aaKnown RBP8.68□□□□□ -1.02
COPS3-217ENST00000583160 RBM19Q9Y4C8 960 aaKnown RBP8.68□□□□□ -1.02
COPS3-217ENST00000583160 SFI1A8K8P3 1242 aa8.67□□□□□ -1.02
COPS3-217ENST00000583160 DKK1O94907 266 aa8.67□□□□□ -1.02
COPS3-217ENST00000583160 TATP17735 454 aaPredicted RBP8.67□□□□□ -1.02
COPS3-217ENST00000583160 LMOD1P29536 600 aaPredicted RBP8.67□□□□□ -1.02
COPS3-217ENST00000583160 NOS2P35228 1153 aa8.67□□□□□ -1.02
COPS3-217ENST00000583160 TEAD4Q15561 434 aa8.67□□□□□ -1.02
COPS3-217ENST00000583160 L3MBTL2Q969R5 705 aa8.67□□□□□ -1.02
COPS3-217ENST00000583160 ZCCHC2Q9C0B9 1178 aaKnown RBP8.67□□□□□ -1.02
COPS3-217ENST00000583160 A0A1W2PNR3 127 aa8.66□□□□□ -1.02
COPS3-217ENST00000583160 M0R2N6 131 aa8.66□□□□□ -1.02
COPS3-217ENST00000583160 BNIP3LO60238 219 aa8.66□□□□□ -1.02
COPS3-217ENST00000583160 KANK4Q5T7N3 995 aaPredicted RBP8.66□□□□□ -1.02
COPS3-217ENST00000583160 FIGNL1Q6PIW4 674 aa8.66□□□□□ -1.02
COPS3-217ENST00000583160 LARP1Q6PKG0 1096 aaKnown RBP8.66□□□□□ -1.02
COPS3-217ENST00000583160 NLRP8Q86W28 1048 aa8.66□□□□□ -1.02
COPS3-217ENST00000583160 ZIC5Q96T25 663 aa8.66□□□□□ -1.02
COPS3-217ENST00000583160 ATXN7L1Q9ULK2 861 aaPredicted RBP8.66□□□□□ -1.02
COPS3-217ENST00000583160 TXLNAP40222 546 aa8.65□□□□□ -1.02
COPS3-217ENST00000583160 MAP3K10Q02779 954 aa8.65□□□□□ -1.02
COPS3-217ENST00000583160 TSEN2Q8NCE0 465 aaKnown RBP8.65□□□□□ -1.02
COPS3-217ENST00000583160 ACDQ96AP0 544 aa8.65□□□□□ -1.02
COPS3-217ENST00000583160 ABHD17AQ96GS6 310 aa8.65□□□□□ -1.02
COPS3-217ENST00000583160 TSPAN10Q9H1Z9 355 aaPredicted RBP8.65□□□□□ -1.02
COPS3-217ENST00000583160 VRTNQ9H8Y1 702 aa8.65□□□□□ -1.02
COPS3-217ENST00000583160 NDFIP2Q9NV92 336 aa8.65□□□□□ -1.02
COPS3-217ENST00000583160 ZNF232Q9UNY5 417 aa8.65□□□□□ -1.02
COPS3-217ENST00000583160 PCDHGC4Q9Y5F7 938 aa8.65□□□□□ -1.02
COPS3-217ENST00000583160 SERTM1A2A2V5 107 aa8.64□□□□□ -1.03
COPS3-217ENST00000583160 FGFR3P22607 806 aa8.64□□□□□ -1.03
COPS3-217ENST00000583160 MAP2K3P46734 347 aa8.64□□□□□ -1.03
COPS3-217ENST00000583160 CRTC2Q53ET0 693 aaPredicted RBP8.64□□□□□ -1.03
COPS3-217ENST00000583160 BICDL1Q6ZP65 573 aa8.64□□□□□ -1.03
COPS3-217ENST00000583160 ATXN7O15265 892 aaPredicted RBP8.63□□□□□ -1.03
COPS3-217ENST00000583160 SEC13P55735 322 aa8.63□□□□□ -1.03
COPS3-217ENST00000583160 PTK7Q13308 1070 aa8.63□□□□□ -1.03
COPS3-217ENST00000583160 SH3PXD2AQ5TCZ1 1133 aa8.63□□□□□ -1.03
COPS3-217ENST00000583160 ZMYND15Q9H091 742 aa8.63□□□□□ -1.03
COPS3-217ENST00000583160 ENAMQ9NRM1 1142 aa8.63□□□□□ -1.03
COPS3-217ENST00000583160 GJA3Q9Y6H8 435 aa8.63□□□□□ -1.03
COPS3-217ENST00000583160 BCRP11274 1271 aa8.62□□□□□ -1.03
COPS3-217ENST00000583160 PSMA6P60900 246 aaKnown RBP8.62□□□□□ -1.03
COPS3-217ENST00000583160 CTBSQ01459 385 aa8.62□□□□□ -1.03
COPS3-217ENST00000583160 DPYDQ12882 1025 aa8.62□□□□□ -1.03
COPS3-217ENST00000583160 CFAP70Q5T0N1 1121 aa8.62□□□□□ -1.03
COPS3-217ENST00000583160 KLRG1Q96E93 195 aa8.62□□□□□ -1.03
COPS3-217ENST00000583160 GTF3C3Q9Y5Q9 886 aa8.62□□□□□ -1.03
COPS3-217ENST00000583160 EML1O00423 815 aa8.61□□□□□ -1.03
COPS3-217ENST00000583160 C2CD2LO14523 706 aa8.61□□□□□ -1.03
COPS3-217ENST00000583160 BMP4P12644 408 aa8.61□□□□□ -1.03
COPS3-217ENST00000583160 MARSP56192 900 aaKnown RBP8.61□□□□□ -1.03
COPS3-217ENST00000583160 OXCT2Q9BYC2 517 aaPredicted RBP8.61□□□□□ -1.03
COPS3-217ENST00000583160 CHMP3Q9Y3E7 222 aa8.61□□□□□ -1.03
COPS3-217ENST00000583160 ATAD2Q6PL18 1390 aa8.61□□□□□ -1.03
COPS3-217ENST00000583160 DCDC2BA2VCK2 349 aa8.6□□□□□ -1.03
COPS3-217ENST00000583160 FAM196BA6NMK8 535 aa8.6□□□□□ -1.03
COPS3-217ENST00000583160 USP17L15C9J2P7 530 aa8.6□□□□□ -1.03
COPS3-217ENST00000583160 USP17L10C9JJH3 530 aa8.6□□□□□ -1.03
COPS3-217ENST00000583160 USP17L13C9JLJ4 530 aa8.6□□□□□ -1.03
COPS3-217ENST00000583160 USP17L12C9JPN9 530 aa8.6□□□□□ -1.03
COPS3-217ENST00000583160 USP17L11C9JVI0 530 aa8.6□□□□□ -1.03
COPS3-217ENST00000583160 USP17L21D6R901 530 aa8.6□□□□□ -1.03
COPS3-217ENST00000583160 USP17L18D6R9N7 530 aa8.6□□□□□ -1.03
COPS3-217ENST00000583160 USP17L22D6RA61 530 aa8.6□□□□□ -1.03
COPS3-217ENST00000583160 USP17L17D6RBQ6 530 aa8.6□□□□□ -1.03
COPS3-217ENST00000583160 USP17L19D6RCP7 530 aa8.6□□□□□ -1.03
COPS3-217ENST00000583160 USP17L20D6RJB6 530 aa8.6□□□□□ -1.03
COPS3-217ENST00000583160 KHNYNO15037 678 aaKnown RBP8.6□□□□□ -1.03
COPS3-217ENST00000583160 PPP1R12BO60237 982 aaPredicted RBP8.6□□□□□ -1.03
COPS3-217ENST00000583160 TNP2Q05952 138 aa8.6□□□□□ -1.03
COPS3-217ENST00000583160 USP17L24Q0WX57 530 aa8.6□□□□□ -1.03
COPS3-217ENST00000583160 HINFPQ9BQA5 517 aa8.6□□□□□ -1.03
COPS3-217ENST00000583160 HCN4Q9Y3Q4 1203 aa8.6□□□□□ -1.03
COPS3-217ENST00000583160 C21orf2O43822 256 aa8.59□□□□□ -1.03
COPS3-217ENST00000583160 MAPTP10636 758 aaKnown RBP8.59□□□□□ -1.03
COPS3-217ENST00000583160 RFX1P22670 979 aa8.59□□□□□ -1.03
COPS3-217ENST00000583160 KCNMA1Q12791 1236 aa8.59□□□□□ -1.03
COPS3-217ENST00000583160 CDCA8Q53HL2 280 aa8.59□□□□□ -1.03
COPS3-217ENST00000583160 ANKMY2Q8IV38 441 aa8.59□□□□□ -1.03
COPS3-217ENST00000583160 NEDD1Q8NHV4 660 aa8.59□□□□□ -1.03
COPS3-217ENST00000583160 C7orf43Q8WVR3 580 aa8.59□□□□□ -1.03
COPS3-217ENST00000583160 NEUROD4Q9HD90 331 aa8.59□□□□□ -1.03
COPS3-217ENST00000583160 OIP5O43482 229 aa8.58□□□□□ -1.04
COPS3-217ENST00000583160 SAMD5Q5TGI4 173 aa8.58□□□□□ -1.04
COPS3-217ENST00000583160 LRRC69Q6ZNQ3 347 aa8.58□□□□□ -1.04
COPS3-217ENST00000583160 SCG3Q8WXD2 468 aaKnown RBP8.58□□□□□ -1.04
COPS3-217ENST00000583160 LRRC4BQ9NT99 713 aa8.58□□□□□ -1.04
COPS3-217ENST00000583160 HCN2Q9UL51 889 aa8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 87.7 ms