RNA–Protein interactions for RNA: ENST00000582308.1

RFFL-210, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 3

Gene RFFL, Length 398 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-210ENST00000582308 CCNL1Q9UK58 526 aaPredicted RBP12.27□□□□□ -0.45
RFFL-210ENST00000582308 RREB1Q92766 1687 aa12.26□□□□□ -0.45
RFFL-210ENST00000582308 STARD3NLO95772 234 aa12.26□□□□□ -0.45
RFFL-210ENST00000582308 A1BGP04217 495 aa12.26□□□□□ -0.45
RFFL-210ENST00000582308 CENPBP07199 599 aaPredicted RBP12.26□□□□□ -0.45
RFFL-210ENST00000582308 TXNRD1Q16881 649 aa12.26□□□□□ -0.45
RFFL-210ENST00000582308 LINC00116Q8NCU8 138 aa12.26□□□□□ -0.45
RFFL-210ENST00000582308 NBPF26B4DH59 902 aa12.25□□□□□ -0.45
RFFL-210ENST00000582308 BCAR3O75815 825 aa12.25□□□□□ -0.45
RFFL-210ENST00000582308 EN1Q05925 392 aaPredicted RBP12.25□□□□□ -0.45
RFFL-210ENST00000582308 PDIA6Q15084 440 aa12.25□□□□□ -0.45
RFFL-210ENST00000582308 PROSER3Q2NL68 480 aa12.25□□□□□ -0.45
RFFL-210ENST00000582308 ALDH1L2Q3SY69 923 aa12.25□□□□□ -0.45
RFFL-210ENST00000582308 SLC27A3Q5K4L6 730 aa12.25□□□□□ -0.45
RFFL-210ENST00000582308 NBPF14Q5TI25 921 aa12.25□□□□□ -0.45
RFFL-210ENST00000582308 NBPF10Q6P3W6 841 aaKnown RBP12.25□□□□□ -0.45
RFFL-210ENST00000582308 INTS5Q6P9B9 1019 aaKnown RBP12.25□□□□□ -0.45
RFFL-210ENST00000582308 DEFB132Q7Z7B7 95 aa12.25□□□□□ -0.45
RFFL-210ENST00000582308 CCDC125Q86Z20 511 aa12.25□□□□□ -0.45
RFFL-210ENST00000582308 MRPL50Q8N5N7 158 aaKnown RBP12.25□□□□□ -0.45
RFFL-210ENST00000582308 NBPF15Q8N660 670 aa12.25□□□□□ -0.45
RFFL-210ENST00000582308 CAMKK2Q96RR4 588 aa12.25□□□□□ -0.45
RFFL-210ENST00000582308 BCL2L13Q9BXK5 485 aa12.25□□□□□ -0.45
RFFL-210ENST00000582308 CHPF2Q9P2E5 772 aa12.25□□□□□ -0.45
RFFL-210ENST00000582308 C4BP0C0L5 1744 aa12.25□□□□□ -0.45
RFFL-210ENST00000582308 ANXA1P04083 346 aa12.24□□□□□ -0.45
RFFL-210ENST00000582308 CRKLP46109 303 aaKnown RBP12.24□□□□□ -0.45
RFFL-210ENST00000582308 PIP4K2AP48426 406 aaPredicted RBP12.24□□□□□ -0.45
RFFL-210ENST00000582308 SF3B2Q13435 895 aaKnown RBP12.24□□□□□ -0.45
RFFL-210ENST00000582308 EZH2Q15910 746 aaKnown RBP12.24□□□□□ -0.45
RFFL-210ENST00000582308 UPF1Q92900 1129 aaKnown RBP eCLIP12.24□□□□□ -0.45
RFFL-210ENST00000582308 CHMP4AQ9BY43 222 aa12.24□□□□□ -0.45
RFFL-210ENST00000582308 DDX21Q9NR30 783 aaKnown RBP eCLIP12.24□□□□□ -0.45
RFFL-210ENST00000582308 SMC4Q9NTJ3 1288 aa12.24□□□□□ -0.45
RFFL-210ENST00000582308 UBR3Q6ZT12 1888 aa12.23□□□□□ -0.45
RFFL-210ENST00000582308 ERBB4Q15303 1308 aa12.23□□□□□ -0.45
RFFL-210ENST00000582308 SLC4A2P04920 1241 aa12.23□□□□□ -0.45
RFFL-210ENST00000582308 BAG6P46379 1132 aa12.23□□□□□ -0.45
RFFL-210ENST00000582308 BRPF1P55201 1214 aaPredicted RBP12.23□□□□□ -0.45
RFFL-210ENST00000582308 RC3H1Q5TC82 1133 aaKnown RBP12.23□□□□□ -0.45
RFFL-210ENST00000582308 G2E3Q7L622 706 aa12.23□□□□□ -0.45
RFFL-210ENST00000582308 LRP10Q7Z4F1 713 aa12.23□□□□□ -0.45
RFFL-210ENST00000582308 STK31Q9BXU1 1019 aa12.23□□□□□ -0.45
RFFL-210ENST00000582308 CCDC87Q9NVE4 849 aa12.23□□□□□ -0.45
RFFL-210ENST00000582308 DBF4Q9UBU7 674 aaPredicted RBP12.23□□□□□ -0.45
RFFL-210ENST00000582308 NUP188Q5SRE5 1749 aa12.23□□□□□ -0.45
RFFL-210ENST00000582308 CNTNAP4Q9C0A0 1308 aa12.22□□□□□ -0.45
RFFL-210ENST00000582308 MYL6BP14649 208 aa12.22□□□□□ -0.45
RFFL-210ENST00000582308 ZBTB1Q9Y2K1 713 aa12.22□□□□□ -0.45
RFFL-210ENST00000582308 TUBGCP6Q96RT7 1819 aa12.22□□□□□ -0.45
RFFL-210ENST00000582308 CANXP27824 592 aaKnown RBP12.21□□□□□ -0.45
RFFL-210ENST00000582308 PHAXQ9H814 394 aaKnown RBP12.21□□□□□ -0.45
RFFL-210ENST00000582308 HYPKQ9NX55 129 aa12.21□□□□□ -0.45
RFFL-210ENST00000582308 NOB1Q9ULX3 412 aaKnown RBP12.2□□□□□ -0.46
RFFL-210ENST00000582308 SUPT16HQ9Y5B9 1047 aaKnown RBP12.2□□□□□ -0.46
RFFL-210ENST00000582308 RNF123Q5XPI4 1314 aa12.19□□□□□ -0.46
RFFL-210ENST00000582308 NUP98P52948 1817 aa12.19□□□□□ -0.46
RFFL-210ENST00000582308 PLIN1O60240 522 aa12.19□□□□□ -0.46
RFFL-210ENST00000582308 RPS6KA4O75676 772 aa12.19□□□□□ -0.46
RFFL-210ENST00000582308 IL6STP40189 918 aaPredicted RBP12.19□□□□□ -0.46
RFFL-210ENST00000582308 EIF5P55010 431 aaKnown RBP12.19□□□□□ -0.46
RFFL-210ENST00000582308 FLIIQ13045 1269 aa12.19□□□□□ -0.46
RFFL-210ENST00000582308 SMIM5Q71RC9 77 aa12.19□□□□□ -0.46
RFFL-210ENST00000582308 COPS6Q7L5N1 327 aa12.19□□□□□ -0.46
RFFL-210ENST00000582308 AMIGO3Q86WK7 504 aa12.19□□□□□ -0.46
RFFL-210ENST00000582308 XAGE3Q8WTP9 111 aa12.19□□□□□ -0.46
RFFL-210ENST00000582308 ARFGEF2Q9Y6D5 1785 aa12.18□□□□□ -0.46
RFFL-210ENST00000582308 GNPATO15228 680 aa12.18□□□□□ -0.46
RFFL-210ENST00000582308 AIMP1Q12904 312 aaKnown RBP12.18□□□□□ -0.46
RFFL-210ENST00000582308 ZNF827Q17R98 1081 aa12.18□□□□□ -0.46
RFFL-210ENST00000582308 TTLL7Q6ZT98 887 aa12.18□□□□□ -0.46
RFFL-210ENST00000582308 FRAT1Q92837 279 aaPredicted RBP12.18□□□□□ -0.46
RFFL-210ENST00000582308 AKT1S1Q96B36 256 aa12.18□□□□□ -0.46
RFFL-210ENST00000582308 C4AP0C0L4 1744 aa12.17□□□□□ -0.46
RFFL-210ENST00000582308 KIF16BQ96L93 1317 aa12.17□□□□□ -0.46
RFFL-210ENST00000582308 HMGB2P26583 209 aaKnown RBP12.17□□□□□ -0.46
RFFL-210ENST00000582308 AK7Q96M32 723 aa12.17□□□□□ -0.46
RFFL-210ENST00000582308 TNNQ9UQP3 1299 aa12.17□□□□□ -0.46
RFFL-210ENST00000582308 RTCBQ9Y3I0 505 aaKnown RBP12.17□□□□□ -0.46
RFFL-210ENST00000582308 ZNF330Q9Y3S2 320 aaPredicted RBP12.17□□□□□ -0.46
RFFL-210ENST00000582308 QSER1Q2KHR3 1735 aa12.17□□□□□ -0.46
RFFL-210ENST00000582308 PTPRCP08575 1304 aa12.16□□□□□ -0.46
RFFL-210ENST00000582308 BCORQ6W2J9 1755 aa12.16□□□□□ -0.46
RFFL-210ENST00000582308 IPO8O15397 1037 aaKnown RBP12.16□□□□□ -0.46
RFFL-210ENST00000582308 TRIM27P14373 513 aa12.16□□□□□ -0.46
RFFL-210ENST00000582308 RRP1P56182 461 aaKnown RBP12.16□□□□□ -0.46
RFFL-210ENST00000582308 FKBP5Q13451 457 aaPredicted RBP12.16□□□□□ -0.46
RFFL-210ENST00000582308 ZKSCAN2Q63HK3 967 aa12.16□□□□□ -0.46
RFFL-210ENST00000582308 ATF7IPQ6VMQ6 1270 aa12.16□□□□□ -0.46
RFFL-210ENST00000582308 ARHGAP45Q92619 1136 aa12.16□□□□□ -0.46
RFFL-210ENST00000582308 ANO8Q9HCE9 1232 aaPredicted RBP12.16□□□□□ -0.46
RFFL-210ENST00000582308 ADCY9O60503 1353 aa12.16□□□□□ -0.46
RFFL-210ENST00000582308 COL15A1P39059 1388 aa12.16□□□□□ -0.46
RFFL-210ENST00000582308 N4BP2Q86UW6 1770 aaPredicted RBP12.15□□□□□ -0.46
RFFL-210ENST00000582308 PI4KAP2A4QPH2 592 aa12.15□□□□□ -0.46
RFFL-210ENST00000582308 F6X3S4 739 aa12.15□□□□□ -0.46
RFFL-210ENST00000582308 ANKRD13DQ6ZTN6 518 aa12.15□□□□□ -0.46
RFFL-210ENST00000582308 PI4KAP1Q8N8J0 262 aa12.15□□□□□ -0.46
RFFL-210ENST00000582308 TBC1D2BQ9UPU7 963 aa12.15□□□□□ -0.46
RFFL-210ENST00000582308 ANKRD36CQ5JPF3 1778 aa12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms