RNA–Protein interactions for RNA: ENST00000582242.1

CDH8-207, Transcript of cadherin 8, humanhuman

TSL 2

Gene CDH8, Length 572 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH8-207ENST00000582242 FKBP4Q02790 459 aaKnown RBP eCLIP12.99□□□□□ -0.33
CDH8-207ENST00000582242 HELQQ8TDG4 1101 aa12.99□□□□□ -0.33
CDH8-207ENST00000582242 CNKSR1Q969H4 720 aa12.99□□□□□ -0.33
CDH8-207ENST00000582242 ITPKCQ96DU7 683 aa12.99□□□□□ -0.33
CDH8-207ENST00000582242 ESYT1Q9BSJ8 1104 aa12.99□□□□□ -0.33
CDH8-207ENST00000582242 ANO2Q9NQ90 1003 aa12.99□□□□□ -0.33
CDH8-207ENST00000582242 A0A1W2PRU2 124 aa12.98□□□□□ -0.33
CDH8-207ENST00000582242 PPP1R12BO60237 982 aaPredicted RBP12.98□□□□□ -0.33
CDH8-207ENST00000582242 CBLBQ13191 982 aa12.98□□□□□ -0.33
CDH8-207ENST00000582242 CLN3Q13286 438 aa12.98□□□□□ -0.33
CDH8-207ENST00000582242 KIFC2Q96AC6 838 aa12.98□□□□□ -0.33
CDH8-207ENST00000582242 PSMA6P60900 246 aaKnown RBP12.97□□□□□ -0.33
CDH8-207ENST00000582242 TLR1Q15399 786 aa12.97□□□□□ -0.33
CDH8-207ENST00000582242 ECM1Q16610 540 aa12.97□□□□□ -0.33
CDH8-207ENST00000582242 VTI1AQ96AJ9 217 aa12.97□□□□□ -0.33
CDH8-207ENST00000582242 C2orf49Q9BVC5 232 aaPredicted RBP12.97□□□□□ -0.33
CDH8-207ENST00000582242 UTP3Q9NQZ2 479 aaKnown RBP eCLIP12.97□□□□□ -0.33
CDH8-207ENST00000582242 IQSEC3Q9UPP2 1182 aaPredicted RBP12.97□□□□□ -0.33
CDH8-207ENST00000582242 RB1CC1Q8TDY2 1594 aa12.96□□□□□ -0.33
CDH8-207ENST00000582242 CDK2AP1O14519 115 aa12.96□□□□□ -0.33
CDH8-207ENST00000582242 ZIC2O95409 532 aaPredicted RBP12.96□□□□□ -0.33
CDH8-207ENST00000582242 POTEAQ6S8J7 498 aa12.96□□□□□ -0.33
CDH8-207ENST00000582242 CHMP7Q8WUX9 453 aaPredicted RBP12.96□□□□□ -0.33
CDH8-207ENST00000582242 RSF1Q96T23 1441 aaPredicted RBP12.96□□□□□ -0.34
CDH8-207ENST00000582242 PTGIRP43119 386 aa12.95□□□□□ -0.34
CDH8-207ENST00000582242 WDR4P57081 412 aaKnown RBP12.95□□□□□ -0.34
CDH8-207ENST00000582242 NAA30Q147X3 362 aaPredicted RBP12.95□□□□□ -0.34
CDH8-207ENST00000582242 TBCELQ5QJ74 424 aa12.95□□□□□ -0.34
CDH8-207ENST00000582242 NBPF15Q8N660 670 aa12.95□□□□□ -0.34
CDH8-207ENST00000582242 TIMP2P16035 220 aa12.94□□□□□ -0.34
CDH8-207ENST00000582242 NPR3P17342 541 aa12.94□□□□□ -0.34
CDH8-207ENST00000582242 RBM25P49756 843 aaKnown RBP12.94□□□□□ -0.34
CDH8-207ENST00000582242 MTMR3Q13615 1198 aa12.94□□□□□ -0.34
CDH8-207ENST00000582242 NOM1Q5C9Z4 860 aaKnown RBP12.94□□□□□ -0.34
CDH8-207ENST00000582242 ZNF428Q96B54 188 aa12.94□□□□□ -0.34
CDH8-207ENST00000582242 FHDC1Q9C0D6 1143 aaPredicted RBP12.94□□□□□ -0.34
CDH8-207ENST00000582242 ZFAND3Q9H8U3 227 aa12.94□□□□□ -0.34
CDH8-207ENST00000582242 USP3Q9Y6I4 520 aa12.94□□□□□ -0.34
CDH8-207ENST00000582242 ARHGAP4P98171 946 aa12.93□□□□□ -0.34
CDH8-207ENST00000582242 C16orf46Q6P387 395 aa12.93□□□□□ -0.34
CDH8-207ENST00000582242 TERTO14746 1132 aaKnown RBP12.92□□□□□ -0.34
CDH8-207ENST00000582242 WIPF1O43516 503 aa12.92□□□□□ -0.34
CDH8-207ENST00000582242 CHMP3Q9Y3E7 222 aa12.92□□□□□ -0.34
CDH8-207ENST00000582242 CAPN5O15484 640 aaPredicted RBP12.91□□□□□ -0.34
CDH8-207ENST00000582242 FAM13AO94988 1023 aa12.9□□□□□ -0.34
CDH8-207ENST00000582242 BMP1P13497 986 aa12.9□□□□□ -0.34
CDH8-207ENST00000582242 HIRAP54198 1017 aaPredicted RBP12.9□□□□□ -0.34
CDH8-207ENST00000582242 CENPCQ03188 943 aa12.9□□□□□ -0.34
CDH8-207ENST00000582242 LCE2CQ5TA81 110 aa12.9□□□□□ -0.34
CDH8-207ENST00000582242 ZNF295-AS1Q8N0V1 137 aa12.9□□□□□ -0.34
CDH8-207ENST00000582242 AGBL1Q96MI9 1066 aa12.9□□□□□ -0.34
CDH8-207ENST00000582242 SAP130Q9H0E3 1048 aa12.9□□□□□ -0.34
CDH8-207ENST00000582242 DCTN4Q9UJW0 460 aa12.9□□□□□ -0.34
CDH8-207ENST00000582242 RBM47A0AV96 593 aaKnown RBP12.89□□□□□ -0.35
CDH8-207ENST00000582242 TEAD4Q15561 434 aa12.89□□□□□ -0.35
CDH8-207ENST00000582242 TRIM46Q7Z4K8 759 aa12.89□□□□□ -0.35
CDH8-207ENST00000582242 MEIOBQ8N635 442 aa12.89□□□□□ -0.35
CDH8-207ENST00000582242 MYO19Q96H55 970 aa12.89□□□□□ -0.35
CDH8-207ENST00000582242 NLRP3Q96P20 1036 aa12.89□□□□□ -0.35
CDH8-207ENST00000582242 MEN1O00255 615 aa12.88□□□□□ -0.35
CDH8-207ENST00000582242 EML1O00423 815 aa12.88□□□□□ -0.35
CDH8-207ENST00000582242 RELBQ01201 579 aa12.88□□□□□ -0.35
CDH8-207ENST00000582242 QTRT2Q9H974 415 aaKnown RBP12.88□□□□□ -0.35
CDH8-207ENST00000582242 SERTM1A2A2V5 107 aa12.87□□□□□ -0.35
CDH8-207ENST00000582242 PPARGC1BQ86YN6 1023 aaKnown RBP12.87□□□□□ -0.35
CDH8-207ENST00000582242 NPAS4Q8IUM7 802 aa12.87□□□□□ -0.35
CDH8-207ENST00000582242 ANKRD33BA6NCL7 494 aa12.86□□□□□ -0.35
CDH8-207ENST00000582242 MPSTP25325 297 aa12.86□□□□□ -0.35
CDH8-207ENST00000582242 MAPK1P28482 360 aa12.86□□□□□ -0.35
CDH8-207ENST00000582242 COX20Q5RI15 118 aa12.86□□□□□ -0.35
CDH8-207ENST00000582242 ZDHHC1Q8WTX9 485 aa12.86□□□□□ -0.35
CDH8-207ENST00000582242 ASB16Q96NS5 453 aa12.86□□□□□ -0.35
CDH8-207ENST00000582242 TNFRSF10BO14763 440 aa12.85□□□□□ -0.35
CDH8-207ENST00000582242 GPC1P35052 558 aa12.85□□□□□ -0.35
CDH8-207ENST00000582242 NOS2P35228 1153 aa12.85□□□□□ -0.35
CDH8-207ENST00000582242 ZSCAN10Q96SZ4 725 aaPredicted RBP12.85□□□□□ -0.35
CDH8-207ENST00000582242 ZNF395Q9H8N7 513 aaPredicted RBP12.85□□□□□ -0.35
CDH8-207ENST00000582242 CABP1Q9NZU7 370 aa12.84□□□□□ -0.35
CDH8-207ENST00000582242 STIM2Q9P246 746 aa12.84□□□□□ -0.35
CDH8-207ENST00000582242 E9PSI1 815 aa12.83□□□□□ -0.36
CDH8-207ENST00000582242 SH3PXD2AQ5TCZ1 1133 aa12.83□□□□□ -0.36
CDH8-207ENST00000582242 L3MBTL2Q969R5 705 aa12.83□□□□□ -0.36
CDH8-207ENST00000582242 NIFKQ9BYG3 293 aaKnown RBP12.83□□□□□ -0.36
CDH8-207ENST00000582242 LRFN2Q9ULH4 789 aa12.83□□□□□ -0.36
CDH8-207ENST00000582242 ZSCAN29Q8IWY8 852 aaPredicted RBP12.82□□□□□ -0.36
CDH8-207ENST00000582242 RHBDD1Q8TEB9 315 aa12.82□□□□□ -0.36
CDH8-207ENST00000582242 ZNF232Q9UNY5 417 aa12.82□□□□□ -0.36
CDH8-207ENST00000582242 INSM1Q01101 510 aaPredicted RBP12.81□□□□□ -0.36
CDH8-207ENST00000582242 ALKBH2Q6NS38 261 aa12.81□□□□□ -0.36
CDH8-207ENST00000582242 ALDH16A1Q8IZ83 802 aa12.81□□□□□ -0.36
CDH8-207ENST00000582242 RGL4Q8IZJ4 473 aa12.81□□□□□ -0.36
CDH8-207ENST00000582242 TSEN34Q9BSV6 310 aaKnown RBP12.81□□□□□ -0.36
CDH8-207ENST00000582242 GRIP2Q9C0E4 1043 aa12.81□□□□□ -0.36
CDH8-207ENST00000582242 GTF2E1P29083 439 aaPredicted RBP12.8□□□□□ -0.36
CDH8-207ENST00000582242 RTN1Q16799 776 aa12.8□□□□□ -0.36
CDH8-207ENST00000582242 TMEM214Q6NUQ4 689 aaKnown RBP12.8□□□□□ -0.36
CDH8-207ENST00000582242 ABTB2Q8N961 1025 aa12.8□□□□□ -0.36
CDH8-207ENST00000582242 BCL2L13Q9BXK5 485 aa12.8□□□□□ -0.36
CDH8-207ENST00000582242 RBCK1Q9BYM8 510 aa12.8□□□□□ -0.36
CDH8-207ENST00000582242 NXF1Q9UBU9 619 aaKnown RBP12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms