RNA–Protein interactions for RNA: ENST00000582104.5

SNX11-210, Transcript of sorting nexin 11, humanhuman

TSL 2 BASIC

Gene SNX11, Length 1,282 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX11-210ENST00000582104 FOXN1O15353 648 aa17.61■□□□□ 0.41
SNX11-210ENST00000582104 GYS1P13807 737 aa17.61■□□□□ 0.41
SNX11-210ENST00000582104 VEGFAP15692 232 aaPredicted RBP17.61■□□□□ 0.41
SNX11-210ENST00000582104 FAM161AQ3B820 660 aa17.61■□□□□ 0.41
SNX11-210ENST00000582104 PRDM10Q9NQV6 1147 aa17.61■□□□□ 0.41
SNX11-210ENST00000582104 ASAP1Q9ULH1 1129 aa17.61■□□□□ 0.41
SNX11-210ENST00000582104 RTCBQ9Y3I0 505 aaKnown RBP17.61■□□□□ 0.41
SNX11-210ENST00000582104 KDM6AO15550 1401 aaPredicted RBP17.61■□□□□ 0.41
SNX11-210ENST00000582104 NKX1-1Q15270 411 aaPredicted RBP17.6■□□□□ 0.41
SNX11-210ENST00000582104 NCAPD2Q15021 1401 aa17.6■□□□□ 0.41
SNX11-210ENST00000582104 TIAM2Q8IVF5 1701 aa17.59■□□□□ 0.41
SNX11-210ENST00000582104 SULT6B1Q6IMI4 303 aa17.59■□□□□ 0.41
SNX11-210ENST00000582104 CCDC146Q8IYE0 955 aa17.59■□□□□ 0.41
SNX11-210ENST00000582104 ARHGEF1Q92888 912 aaKnown RBP17.59■□□□□ 0.41
SNX11-210ENST00000582104 RSPH6AQ9H0K4 717 aa17.59■□□□□ 0.41
SNX11-210ENST00000582104 MKRN1Q9UHC7 482 aaKnown RBP17.59■□□□□ 0.41
SNX11-210ENST00000582104 COL5A3P25940 1745 aaPredicted RBP17.58■□□□□ 0.41
SNX11-210ENST00000582104 KDRP35968 1356 aa17.58■□□□□ 0.4
SNX11-210ENST00000582104 GLTPD2A6NH11 291 aa17.58■□□□□ 0.4
SNX11-210ENST00000582104 RASSF7Q02833 373 aa17.58■□□□□ 0.4
SNX11-210ENST00000582104 TMOD3Q9NYL9 352 aa17.58■□□□□ 0.4
SNX11-210ENST00000582104 ZNF831Q5JPB2 1677 aa17.56■□□□□ 0.4
SNX11-210ENST00000582104 CHRNA5P30532 468 aa17.56■□□□□ 0.4
SNX11-210ENST00000582104 PRKAR2BP31323 418 aa17.56■□□□□ 0.4
SNX11-210ENST00000582104 PLEKHF1Q96S99 279 aa17.56■□□□□ 0.4
SNX11-210ENST00000582104 CREBZFQ9NS37 354 aa17.56■□□□□ 0.4
SNX11-210ENST00000582104 RFC4P35249 363 aa17.55■□□□□ 0.4
SNX11-210ENST00000582104 ATG3Q9NT62 314 aa17.55■□□□□ 0.4
SNX11-210ENST00000582104 CCDC88AQ3V6T2 1871 aa17.54■□□□□ 0.4
SNX11-210ENST00000582104 MYH14Q7Z406 1995 aaKnown RBP17.54■□□□□ 0.4
SNX11-210ENST00000582104 PHACTR3Q96KR7 559 aa17.54■□□□□ 0.4
SNX11-210ENST00000582104 SLC4A9Q96Q91 983 aa17.54■□□□□ 0.4
SNX11-210ENST00000582104 POTECB2RU33 542 aa17.53■□□□□ 0.4
SNX11-210ENST00000582104 LMNB1P20700 586 aa17.53■□□□□ 0.4
SNX11-210ENST00000582104 CTCFP49711 727 aaPredicted RBP17.53■□□□□ 0.4
SNX11-210ENST00000582104 RC3H1Q5TC82 1133 aaKnown RBP17.53■□□□□ 0.4
SNX11-210ENST00000582104 CNTNAP1P78357 1384 aa17.53■□□□□ 0.4
SNX11-210ENST00000582104 CNTNAP4Q9C0A0 1308 aa17.52■□□□□ 0.4
SNX11-210ENST00000582104 RPS6KA4O75676 772 aa17.52■□□□□ 0.4
SNX11-210ENST00000582104 DDR1Q08345 913 aa17.52■□□□□ 0.4
SNX11-210ENST00000582104 RUNDC1Q96C34 613 aa17.52■□□□□ 0.4
SNX11-210ENST00000582104 ABHD8Q96I13 439 aa17.52■□□□□ 0.4
SNX11-210ENST00000582104 SPG7Q9UQ90 795 aa17.51■□□□□ 0.39
SNX11-210ENST00000582104 APAF1O14727 1248 aa17.5■□□□□ 0.39
SNX11-210ENST00000582104 NPM3O75607 178 aaKnown RBP17.5■□□□□ 0.39
SNX11-210ENST00000582104 AIDAQ96BJ3 306 aa17.5■□□□□ 0.39
SNX11-210ENST00000582104 YTHDC1Q96MU7 727 aaKnown RBP17.5■□□□□ 0.39
SNX11-210ENST00000582104 RNF216Q9NWF9 866 aaPredicted RBP17.5■□□□□ 0.39
SNX11-210ENST00000582104 DLEC1Q9Y238 1755 aa17.49■□□□□ 0.39
SNX11-210ENST00000582104 FKBP8Q14318 412 aa17.49■□□□□ 0.39
SNX11-210ENST00000582104 POTEDQ86YR6 584 aa17.49■□□□□ 0.39
SNX11-210ENST00000582104 SRP68Q9UHB9 627 aaKnown RBP17.49■□□□□ 0.39
SNX11-210ENST00000582104 VIRMAQ69YN4 1812 aaKnown RBP17.49■□□□□ 0.39
SNX11-210ENST00000582104 LBX1P52954 281 aa17.48■□□□□ 0.39
SNX11-210ENST00000582104 RBM42Q9BTD8 480 aaKnown RBP17.48■□□□□ 0.39
SNX11-210ENST00000582104 RRP7AQ9Y3A4 280 aaKnown RBP17.48■□□□□ 0.39
SNX11-210ENST00000582104 PHKG2P15735 406 aa17.47■□□□□ 0.39
SNX11-210ENST00000582104 MLLT1Q03111 559 aaPredicted RBP17.47■□□□□ 0.39
SNX11-210ENST00000582104 CHADLQ6NUI6 762 aa17.47■□□□□ 0.39
SNX11-210ENST00000582104 DLG5Q8TDM6 1919 aa17.47■□□□□ 0.39
SNX11-210ENST00000582104 USP42Q9H9J4 1324 aaKnown RBP17.47■□□□□ 0.39
SNX11-210ENST00000582104 MAPK8IP3Q9UPT6 1336 aa17.47■□□□□ 0.39
SNX11-210ENST00000582104 POLRMTO00411 1230 aaKnown RBP17.46■□□□□ 0.39
SNX11-210ENST00000582104 HNRNPUQ00839 825 aaKnown RBP eCLIP17.46■□□□□ 0.39
SNX11-210ENST00000582104 MTHFSDQ2M296 383 aaKnown RBP17.46■□□□□ 0.39
SNX11-210ENST00000582104 IFNL2Q8IZJ0 200 aa17.46■□□□□ 0.39
SNX11-210ENST00000582104 PNNQ9H307 717 aaKnown RBP17.46■□□□□ 0.39
SNX11-210ENST00000582104 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.46■□□□□ 0.39
SNX11-210ENST00000582104 NFKBIEO00221 500 aa17.45■□□□□ 0.38
SNX11-210ENST00000582104 POTEIP0CG38 1075 aa17.45■□□□□ 0.38
SNX11-210ENST00000582104 POTEJP0CG39 1038 aa17.45■□□□□ 0.38
SNX11-210ENST00000582104 TMPOP42166 694 aaKnown RBP17.45■□□□□ 0.38
SNX11-210ENST00000582104 VEGFBP49765 207 aa17.45■□□□□ 0.38
SNX11-210ENST00000582104 WBP1LQ9NX94 342 aa17.45■□□□□ 0.38
SNX11-210ENST00000582104 SALL2Q9Y467 1007 aaPredicted RBP17.45■□□□□ 0.38
SNX11-210ENST00000582104 ADAMTS7Q9UKP4 1686 aa17.45■□□□□ 0.38
SNX11-210ENST00000582104 DICER1Q9UPY3 1922 aaKnown RBP17.45■□□□□ 0.38
SNX11-210ENST00000582104 AFDNP55196 1824 aaKnown RBP17.44■□□□□ 0.38
SNX11-210ENST00000582104 HOXD11P31277 338 aaPredicted RBP17.44■□□□□ 0.38
SNX11-210ENST00000582104 NEUROD2Q15784 382 aa17.44■□□□□ 0.38
SNX11-210ENST00000582104 NFE2L2Q16236 605 aa17.44■□□□□ 0.38
SNX11-210ENST00000582104 DPY19L2Q6NUT2 758 aa17.44■□□□□ 0.38
SNX11-210ENST00000582104 HSPA8P11142 646 aaKnown RBP17.43■□□□□ 0.38
SNX11-210ENST00000582104 RGS19P49795 217 aa17.43■□□□□ 0.38
SNX11-210ENST00000582104 PASKQ96RG2 1323 aa17.43■□□□□ 0.38
SNX11-210ENST00000582104 NRXN2Q9P2S2 1712 aa17.42■□□□□ 0.38
SNX11-210ENST00000582104 TM4SF1P30408 202 aa17.42■□□□□ 0.38
SNX11-210ENST00000582104 CRKLP46109 303 aaKnown RBP17.41■□□□□ 0.38
SNX11-210ENST00000582104 RIPK4P57078 832 aa17.41■□□□□ 0.38
SNX11-210ENST00000582104 PLEKHO1Q53GL0 409 aaPredicted RBP17.41■□□□□ 0.38
SNX11-210ENST00000582104 TRIM35Q9UPQ4 493 aa17.41■□□□□ 0.38
SNX11-210ENST00000582104 TJP1Q07157 1748 aa17.41■□□□□ 0.38
SNX11-210ENST00000582104 NEFMP07197 916 aa17.4■□□□□ 0.38
SNX11-210ENST00000582104 ZNF530Q6P9A1 599 aaPredicted RBP17.4■□□□□ 0.38
SNX11-210ENST00000582104 TTLL6Q8N841 843 aa17.4■□□□□ 0.38
SNX11-210ENST00000582104 CCDC85CA6NKD9 419 aa17.39■□□□□ 0.37
SNX11-210ENST00000582104 ERVV-2B6SEH9 535 aa17.39■□□□□ 0.37
SNX11-210ENST00000582104 AMOTQ4VCS5 1084 aa17.39■□□□□ 0.37
SNX11-210ENST00000582104 GAS2L2Q8NHY3 880 aa17.39■□□□□ 0.37
SNX11-210ENST00000582104 FER1L6Q2WGJ9 1857 aa17.38■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 156.6 ms