RNA–Protein interactions for RNA: ENST00000581671.1

CTC1-208, Transcript of CST telomere replication complex component 1, humanhuman

TSL 3

Gene CTC1, Length 733 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1-208ENST00000581671 A0A0C4DFX4 3053 aa13.58□□□□□ -0.24
CTC1-208ENST00000581671 MAP3K19Q56UN5 1328 aa13.58□□□□□ -0.24
CTC1-208ENST00000581671 FER1L6Q2WGJ9 1857 aa13.57□□□□□ -0.24
CTC1-208ENST00000581671 MAP2K2P36507 400 aa13.57□□□□□ -0.24
CTC1-208ENST00000581671 NBPF15Q8N660 670 aa13.57□□□□□ -0.24
CTC1-208ENST00000581671 AMPHP49418 695 aa13.56□□□□□ -0.24
CTC1-208ENST00000581671 FXR1P51114 621 aaKnown RBP eCLIP13.56□□□□□ -0.24
CTC1-208ENST00000581671 SLC4A9Q96Q91 983 aa13.56□□□□□ -0.24
CTC1-208ENST00000581671 DDX21Q9NR30 783 aaKnown RBP eCLIP13.56□□□□□ -0.24
CTC1-208ENST00000581671 TMOD3Q9NYL9 352 aa13.56□□□□□ -0.24
CTC1-208ENST00000581671 CNTNAP4Q9C0A0 1308 aa13.56□□□□□ -0.24
CTC1-208ENST00000581671 KDRP35968 1356 aa13.56□□□□□ -0.24
CTC1-208ENST00000581671 COL5A3P25940 1745 aaPredicted RBP13.56□□□□□ -0.24
CTC1-208ENST00000581671 SZT2Q5T011 3432 aa13.55□□□□□ -0.24
CTC1-208ENST00000581671 NKX1-1Q15270 411 aaPredicted RBP13.55□□□□□ -0.24
CTC1-208ENST00000581671 ATG3Q9NT62 314 aa13.55□□□□□ -0.24
CTC1-208ENST00000581671 AFDNP55196 1824 aaKnown RBP13.55□□□□□ -0.24
CTC1-208ENST00000581671 SMG6Q86US8 1419 aaKnown RBP13.55□□□□□ -0.24
CTC1-208ENST00000581671 FBLN1P23142 703 aa13.54□□□□□ -0.24
CTC1-208ENST00000581671 TM4SF1P30408 202 aa13.54□□□□□ -0.24
CTC1-208ENST00000581671 USP42Q9H9J4 1324 aaKnown RBP13.54□□□□□ -0.24
CTC1-208ENST00000581671 EPHX2P34913 555 aa13.53□□□□□ -0.24
CTC1-208ENST00000581671 HACL1Q9UJ83 578 aa13.53□□□□□ -0.24
CTC1-208ENST00000581671 FMR1Q06787 632 aaKnown RBP eCLIP13.52□□□□□ -0.25
CTC1-208ENST00000581671 C2CD5Q86YS7 1000 aa13.52□□□□□ -0.25
CTC1-208ENST00000581671 ZNF831Q5JPB2 1677 aa13.51□□□□□ -0.25
CTC1-208ENST00000581671 LTBP3Q9NS15 1303 aa13.51□□□□□ -0.25
CTC1-208ENST00000581671 C21orf2O43822 256 aa13.51□□□□□ -0.25
CTC1-208ENST00000581671 BRPF1P55201 1214 aaPredicted RBP13.51□□□□□ -0.25
CTC1-208ENST00000581671 PNMA8AQ86V59 439 aaPredicted RBP13.51□□□□□ -0.25
CTC1-208ENST00000581671 RBM42Q9BTD8 480 aaKnown RBP13.51□□□□□ -0.25
CTC1-208ENST00000581671 TAOK3Q9H2K8 898 aa13.51□□□□□ -0.25
CTC1-208ENST00000581671 TRPM7Q96QT4 1865 aa13.5□□□□□ -0.25
CTC1-208ENST00000581671 TLL2Q9Y6L7 1015 aa13.5□□□□□ -0.25
CTC1-208ENST00000581671 MKI67P46013 3256 aaKnown RBP13.49□□□□□ -0.25
CTC1-208ENST00000581671 EDC4Q6P2E9 1401 aaKnown RBP13.49□□□□□ -0.25
CTC1-208ENST00000581671 H0YIN7 160 aa13.49□□□□□ -0.25
CTC1-208ENST00000581671 CST9Q5W186 159 aa13.49□□□□□ -0.25
CTC1-208ENST00000581671 NRXN2Q9P2S2 1712 aa13.49□□□□□ -0.25
CTC1-208ENST00000581671 ADAMTS7Q9UKP4 1686 aa13.49□□□□□ -0.25
CTC1-208ENST00000581671 CIAPIN1Q6FI81 312 aa13.48□□□□□ -0.25
CTC1-208ENST00000581671 TRIOBPQ9H2D6 2365 aa13.47□□□□□ -0.25
CTC1-208ENST00000581671 RTL1A6NKG5 1358 aa13.47□□□□□ -0.25
CTC1-208ENST00000581671 HDGFL2Q7Z4V5 671 aaPredicted RBP13.47□□□□□ -0.25
CTC1-208ENST00000581671 SLC17A8Q8NDX2 589 aa13.47□□□□□ -0.25
CTC1-208ENST00000581671 RNF123Q5XPI4 1314 aa13.46□□□□□ -0.25
CTC1-208ENST00000581671 ZNF541Q9H0D2 1346 aa13.46□□□□□ -0.25
CTC1-208ENST00000581671 NFIXQ14938 502 aa13.46□□□□□ -0.25
CTC1-208ENST00000581671 CARMIL3Q8ND23 1372 aa13.45□□□□□ -0.26
CTC1-208ENST00000581671 CRKLP46109 303 aaKnown RBP13.45□□□□□ -0.26
CTC1-208ENST00000581671 RRS1Q15050 365 aaKnown RBP13.45□□□□□ -0.26
CTC1-208ENST00000581671 USPL1Q5W0Q7 1092 aa13.45□□□□□ -0.26
CTC1-208ENST00000581671 ZNF622Q969S3 477 aaKnown RBP eCLIP13.45□□□□□ -0.261e-7■■■■■ 29.8
CTC1-208ENST00000581671 TRAF5O00463 557 aa13.44□□□□□ -0.26
CTC1-208ENST00000581671 SERPINB2P05120 415 aa13.44□□□□□ -0.26
CTC1-208ENST00000581671 SAPCD2Q86UD0 394 aa13.44□□□□□ -0.26
CTC1-208ENST00000581671 TMC1Q8TDI8 760 aa13.44□□□□□ -0.26
CTC1-208ENST00000581671 COG3Q96JB2 828 aa13.44□□□□□ -0.26
CTC1-208ENST00000581671 SPG7Q9UQ90 795 aa13.44□□□□□ -0.26
CTC1-208ENST00000581671 ZPR1O75312 459 aa13.43□□□□□ -0.26
CTC1-208ENST00000581671 ZIC5Q96T25 663 aa13.43□□□□□ -0.26
CTC1-208ENST00000581671 SLC12A5Q9H2X9 1139 aa13.43□□□□□ -0.26
CTC1-208ENST00000581671 HPS5Q9UPZ3 1129 aa13.43□□□□□ -0.26
CTC1-208ENST00000581671 SLX4Q8IY92 1834 aa13.42□□□□□ -0.26
CTC1-208ENST00000581671 A0A1W2PP64 1363 aa13.42□□□□□ -0.26
CTC1-208ENST00000581671 INSRP06213 1382 aa13.42□□□□□ -0.26
CTC1-208ENST00000581671 ANKRD31Q8N7Z5 1873 aa13.42□□□□□ -0.26
CTC1-208ENST00000581671 CEP290O15078 2479 aa13.41□□□□□ -0.26
CTC1-208ENST00000581671 HSP90AB2PQ58FF8 381 aa13.41□□□□□ -0.26
CTC1-208ENST00000581671 CTU1Q7Z7A3 348 aaKnown RBP13.41□□□□□ -0.26
CTC1-208ENST00000581671 HHIPL1Q96JK4 782 aa13.41□□□□□ -0.26
CTC1-208ENST00000581671 COL6A3P12111 3177 aa13.4□□□□□ -0.26
CTC1-208ENST00000581671 CACNA1SQ13698 1873 aa13.4□□□□□ -0.26
CTC1-208ENST00000581671 COL11A2P13942 1736 aaPredicted RBP13.4□□□□□ -0.26
CTC1-208ENST00000581671 PHKG2P15735 406 aa13.4□□□□□ -0.26
CTC1-208ENST00000581671 IFNL2Q8IZJ0 200 aa13.4□□□□□ -0.26
CTC1-208ENST00000581671 L3MBTL2Q969R5 705 aa13.4□□□□□ -0.26
CTC1-208ENST00000581671 TERF2IPQ9NYB0 399 aa13.39□□□□□ -0.27
CTC1-208ENST00000581671 NOGQ13253 232 aa13.38□□□□□ -0.27
CTC1-208ENST00000581671 INTS5Q6P9B9 1019 aaKnown RBP13.38□□□□□ -0.27
CTC1-208ENST00000581671 BICDL1Q6ZP65 573 aa13.38□□□□□ -0.27
CTC1-208ENST00000581671 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.38□□□□□ -0.27
CTC1-208ENST00000581671 PITPNM2Q9BZ72 1349 aa13.38□□□□□ -0.27
CTC1-208ENST00000581671 PTCD1O75127 700 aaKnown RBP13.37□□□□□ -0.27
CTC1-208ENST00000581671 CELF2O95319 508 aaKnown RBP13.37□□□□□ -0.27
CTC1-208ENST00000581671 SOGA3Q5TF21 947 aa13.37□□□□□ -0.27
CTC1-208ENST00000581671 GPC2Q8N158 579 aa13.37□□□□□ -0.27
CTC1-208ENST00000581671 SIN3AQ96ST3 1273 aa13.37□□□□□ -0.27
CTC1-208ENST00000581671 BCL2L12Q9HB09 334 aa13.37□□□□□ -0.27
CTC1-208ENST00000581671 SAGE1Q9NXZ1 904 aa13.37□□□□□ -0.27
CTC1-208ENST00000581671 PDZRN3Q9UPQ7 1066 aa13.37□□□□□ -0.27
CTC1-208ENST00000581671 ERVV-2B6SEH9 535 aa13.36□□□□□ -0.27
CTC1-208ENST00000581671 PDE6BP35913 854 aa13.36□□□□□ -0.27
CTC1-208ENST00000581671 PRPF40BQ6NWY9 871 aaKnown RBP13.36□□□□□ -0.27
CTC1-208ENST00000581671 ZNF277Q9NRM2 450 aaPredicted RBP13.36□□□□□ -0.27
CTC1-208ENST00000581671 NARFQ9UHQ1 456 aa13.36□□□□□ -0.27
CTC1-208ENST00000581671 NCAPD2Q15021 1401 aa13.36□□□□□ -0.27
CTC1-208ENST00000581671 TJP1Q07157 1748 aa13.36□□□□□ -0.27
CTC1-208ENST00000581671 FZD9O00144 591 aa13.35□□□□□ -0.27
CTC1-208ENST00000581671 AKAP4Q5JQC9 854 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 147.7 ms