RNA–Protein interactions for RNA: ENST00000581540.5

SUPT4H1-207, Transcript of SPT4 homolog, DSIF elongation factor subunit, humanhuman

TSL 2 BASIC

Gene SUPT4H1, Length 668 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT4H1-207ENST00000581540 VPS37DQ86XT2 251 aa10.79□□□□□ -0.68
SUPT4H1-207ENST00000581540 TSEN2Q8NCE0 465 aaKnown RBP10.79□□□□□ -0.68
SUPT4H1-207ENST00000581540 INPP5FQ9Y2H2 1132 aa10.79□□□□□ -0.68
SUPT4H1-207ENST00000581540 LGR5O75473 907 aa10.78□□□□□ -0.68
SUPT4H1-207ENST00000581540 PTPROQ16827 1216 aa10.78□□□□□ -0.68
SUPT4H1-207ENST00000581540 BRICD5Q6PL45 260 aa10.78□□□□□ -0.68
SUPT4H1-207ENST00000581540 VTI1AQ96AJ9 217 aa10.78□□□□□ -0.68
SUPT4H1-207ENST00000581540 CYLDQ9NQC7 956 aa10.78□□□□□ -0.68
SUPT4H1-207ENST00000581540 UTP3Q9NQZ2 479 aaKnown RBP eCLIP10.78□□□□□ -0.68
SUPT4H1-207ENST00000581540 EVA1BQ9NVM1 165 aa10.78□□□□□ -0.68
SUPT4H1-207ENST00000581540 KIF27Q86VH2 1401 aa10.77□□□□□ -0.68
SUPT4H1-207ENST00000581540 AAMPQ13685 434 aa10.77□□□□□ -0.69
SUPT4H1-207ENST00000581540 ALG1LQ6GMV1 187 aa10.77□□□□□ -0.69
SUPT4H1-207ENST00000581540 ZCRB1Q8TBF4 217 aaKnown RBP10.77□□□□□ -0.69
SUPT4H1-207ENST00000581540 OSBPL2Q9H1P3 480 aa10.77□□□□□ -0.69
SUPT4H1-207ENST00000581540 ZCCHC11Q5TAX3 1644 aaKnown RBP10.76□□□□□ -0.69
SUPT4H1-207ENST00000581540 NBPF20Q3BBV1 942 aa10.76□□□□□ -0.69
SUPT4H1-207ENST00000581540 ZNF654Q8IZM8 581 aa10.76□□□□□ -0.69
SUPT4H1-207ENST00000581540 KCNB2Q92953 911 aa10.76□□□□□ -0.69
SUPT4H1-207ENST00000581540 ALKBH8Q96BT7 664 aaKnown RBP10.76□□□□□ -0.69
SUPT4H1-207ENST00000581540 SPACA7Q96KW9 195 aa10.76□□□□□ -0.69
SUPT4H1-207ENST00000581540 PIF1Q9H611 641 aa10.76□□□□□ -0.69
SUPT4H1-207ENST00000581540 IQGAP2Q13576 1575 aa10.76□□□□□ -0.69
SUPT4H1-207ENST00000581540 MAGI3Q5TCQ9 1506 aa10.75□□□□□ -0.69
SUPT4H1-207ENST00000581540 STK10O94804 968 aaKnown RBP10.75□□□□□ -0.69
SUPT4H1-207ENST00000581540 TNNI2P48788 182 aa10.75□□□□□ -0.69
SUPT4H1-207ENST00000581540 LAPTM4BQ86VI4 370 aa10.75□□□□□ -0.69
SUPT4H1-207ENST00000581540 PURBQ96QR8 312 aaKnown RBP10.75□□□□□ -0.69
SUPT4H1-207ENST00000581540 CFAP43Q8NDM7 1665 aa10.75□□□□□ -0.69
SUPT4H1-207ENST00000581540 LMTK3Q96Q04 1460 aa10.74□□□□□ -0.69
SUPT4H1-207ENST00000581540 GIGYF1O75420 1035 aaPredicted RBP10.74□□□□□ -0.69
SUPT4H1-207ENST00000581540 ANAPC15P60006 121 aa10.74□□□□□ -0.69
SUPT4H1-207ENST00000581540 NFE2L2Q16236 605 aa10.74□□□□□ -0.69
SUPT4H1-207ENST00000581540 RNF187Q5TA31 235 aaPredicted RBP10.74□□□□□ -0.69
SUPT4H1-207ENST00000581540 CCDC181Q5TID7 509 aa10.74□□□□□ -0.69
SUPT4H1-207ENST00000581540 CRELD1Q96HD1 420 aa10.74□□□□□ -0.69
SUPT4H1-207ENST00000581540 FAM129BQ96TA1 746 aa10.74□□□□□ -0.69
SUPT4H1-207ENST00000581540 NUDT12Q9BQG2 462 aa10.74□□□□□ -0.69
SUPT4H1-207ENST00000581540 BRINP2Q9C0B6 783 aa10.74□□□□□ -0.69
SUPT4H1-207ENST00000581540 WDR7Q9Y4E6 1490 aa10.74□□□□□ -0.69
SUPT4H1-207ENST00000581540 ZNF746Q6NUN9 644 aaPredicted RBP10.73□□□□□ -0.69
SUPT4H1-207ENST00000581540 PPP1R18Q6NYC8 613 aa10.73□□□□□ -0.69
SUPT4H1-207ENST00000581540 NLGN1Q8N2Q7 840 aa10.73□□□□□ -0.69
SUPT4H1-207ENST00000581540 SLC4A5Q9BY07 1137 aa10.73□□□□□ -0.69
SUPT4H1-207ENST00000581540 MYCP01106 439 aaPredicted RBP10.72□□□□□ -0.69
SUPT4H1-207ENST00000581540 HSD3B2P26439 372 aa10.72□□□□□ -0.69
SUPT4H1-207ENST00000581540 GNA15P30679 374 aa10.72□□□□□ -0.69
SUPT4H1-207ENST00000581540 C16orf46Q6P387 395 aa10.72□□□□□ -0.69
SUPT4H1-207ENST00000581540 SH3BP5LQ7L8J4 393 aa10.72□□□□□ -0.69
SUPT4H1-207ENST00000581540 GPATCH3Q96I76 525 aa10.72□□□□□ -0.69
SUPT4H1-207ENST00000581540 FRMD6Q96NE9 622 aa10.72□□□□□ -0.69
SUPT4H1-207ENST00000581540 CARMIL1Q5VZK9 1371 aa10.72□□□□□ -0.69
SUPT4H1-207ENST00000581540 DISP1Q96F81 1524 aa10.72□□□□□ -0.69
SUPT4H1-207ENST00000581540 KIF21BO75037 1637 aa10.72□□□□□ -0.69
SUPT4H1-207ENST00000581540 EIF1AXP47813 144 aaKnown RBP10.71□□□□□ -0.69
SUPT4H1-207ENST00000581540 CD109Q6YHK3 1445 aa10.71□□□□□ -0.69
SUPT4H1-207ENST00000581540 DDX41Q9UJV9 622 aaKnown RBP10.71□□□□□ -0.69
SUPT4H1-207ENST00000581540 PPME1Q9Y570 386 aa10.71□□□□□ -0.69
SUPT4H1-207ENST00000581540 PCDHB11Q9Y5F2 797 aa10.71□□□□□ -0.69
SUPT4H1-207ENST00000581540 EMILIN1Q9Y6C2 1016 aa10.71□□□□□ -0.69
SUPT4H1-207ENST00000581540 ADAMTSL3P82987 1691 aa10.7□□□□□ -0.7
SUPT4H1-207ENST00000581540 PTPRMP28827 1452 aa10.7□□□□□ -0.7
SUPT4H1-207ENST00000581540 NR1I2O75469 434 aa10.7□□□□□ -0.7
SUPT4H1-207ENST00000581540 ENOX2Q16206 610 aaKnown RBP10.7□□□□□ -0.7
SUPT4H1-207ENST00000581540 GAS2L2Q8NHY3 880 aa10.7□□□□□ -0.7
SUPT4H1-207ENST00000581540 FBF1Q8TES7 1133 aa10.7□□□□□ -0.7
SUPT4H1-207ENST00000581540 NOP58Q9Y2X3 529 aaKnown RBP10.7□□□□□ -0.7
SUPT4H1-207ENST00000581540 ARAP3Q8WWN8 1544 aa10.69□□□□□ -0.7
SUPT4H1-207ENST00000581540 UGGT2Q9NYU1 1516 aa10.69□□□□□ -0.7
SUPT4H1-207ENST00000581540 PLEKHD1A6NEE1 506 aa10.69□□□□□ -0.7
SUPT4H1-207ENST00000581540 ESPNB1AK53 854 aa10.69□□□□□ -0.7
SUPT4H1-207ENST00000581540 GPR182O15218 404 aa10.69□□□□□ -0.7
SUPT4H1-207ENST00000581540 TCEAL1Q15170 157 aa10.69□□□□□ -0.7
SUPT4H1-207ENST00000581540 MSS51Q4VC12 460 aa10.69□□□□□ -0.7
SUPT4H1-207ENST00000581540 CC2D2BQ6DHV5 1058 aa10.69□□□□□ -0.7
SUPT4H1-207ENST00000581540 SEPT12Q8IYM1 358 aa10.69□□□□□ -0.7
SUPT4H1-207ENST00000581540 SERBP1Q8NC51 408 aaKnown RBP eCLIP10.69□□□□□ -0.7
SUPT4H1-207ENST00000581540 SCG3Q8WXD2 468 aaKnown RBP10.69□□□□□ -0.7
SUPT4H1-207ENST00000581540 MRFAP1L1Q96HT8 127 aa10.69□□□□□ -0.7
SUPT4H1-207ENST00000581540 PSMD1Q99460 953 aa10.69□□□□□ -0.7
SUPT4H1-207ENST00000581540 CARD14Q9BXL6 1004 aa10.69□□□□□ -0.7
SUPT4H1-207ENST00000581540 NBPF3Q9H094 633 aa10.69□□□□□ -0.7
SUPT4H1-207ENST00000581540 ZNF358Q9NW07 568 aa10.69□□□□□ -0.7
SUPT4H1-207ENST00000581540 WWC3Q9ULE0 1092 aa10.69□□□□□ -0.7
SUPT4H1-207ENST00000581540 PNMA6FA0A0J9YX94 578 aa10.68□□□□□ -0.7
SUPT4H1-207ENST00000581540 FZD6O60353 706 aa10.68□□□□□ -0.7
SUPT4H1-207ENST00000581540 EVX2Q03828 476 aa10.68□□□□□ -0.7
SUPT4H1-207ENST00000581540 BMS1Q14692 1282 aaKnown RBP10.68□□□□□ -0.7
SUPT4H1-207ENST00000581540 USP48Q86UV5 1035 aa10.68□□□□□ -0.7
SUPT4H1-207ENST00000581540 ABTB2Q8N961 1025 aa10.68□□□□□ -0.7
SUPT4H1-207ENST00000581540 THAP11Q96EK4 314 aa10.68□□□□□ -0.7
SUPT4H1-207ENST00000581540 SLC10A4Q96EP9 437 aa10.68□□□□□ -0.7
SUPT4H1-207ENST00000581540 RNF19AQ9NV58 838 aa10.68□□□□□ -0.7
SUPT4H1-207ENST00000581540 CCDC87Q9NVE4 849 aa10.68□□□□□ -0.7
SUPT4H1-207ENST00000581540 PCF11O94913 1555 aaKnown RBP10.68□□□□□ -0.7
SUPT4H1-207ENST00000581540 PHLDB1Q86UU1 1377 aa10.67□□□□□ -0.7
SUPT4H1-207ENST00000581540 MAGEB6P1A0A0J9YX57 407 aa10.67□□□□□ -0.7
SUPT4H1-207ENST00000581540 BACH1O14867 736 aa10.67□□□□□ -0.7
SUPT4H1-207ENST00000581540 DXOO77932 396 aaKnown RBP10.67□□□□□ -0.7
SUPT4H1-207ENST00000581540 IGHA2P01877 340 aa10.67□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 68.5 ms