RNA–Protein interactions for RNA: ENST00000581523.5

MSI2-213, Transcript of musashi RNA binding protein 2, humanhuman

TSL 2

Gene MSI2, Length 534 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSI2-213ENST00000581523 FBXO41Q8TF61 875 aa6.83□□□□□ -1.32
MSI2-213ENST00000581523 CCNB3Q8WWL7 1395 aa6.82□□□□□ -1.32
MSI2-213ENST00000581523 NBPF20Q3BBV1 942 aa6.82□□□□□ -1.32
MSI2-213ENST00000581523 SEPT12Q8IYM1 358 aa6.82□□□□□ -1.32
MSI2-213ENST00000581523 SLC10A4Q96EP9 437 aa6.82□□□□□ -1.32
MSI2-213ENST00000581523 CDV3Q9UKY7 258 aaKnown RBP6.82□□□□□ -1.32
MSI2-213ENST00000581523 ZNF142P52746 1687 aaPredicted RBP6.81□□□□□ -1.32
MSI2-213ENST00000581523 SH3BP2P78314 561 aa6.81□□□□□ -1.32
MSI2-213ENST00000581523 GTF2IP78347 998 aa6.81□□□□□ -1.32
MSI2-213ENST00000581523 USP4Q13107 963 aa6.81□□□□□ -1.32
MSI2-213ENST00000581523 C1orf216Q8TAB5 229 aa6.81□□□□□ -1.32
MSI2-213ENST00000581523 SIRT1Q96EB6 747 aa6.81□□□□□ -1.32
MSI2-213ENST00000581523 ZNF594Q96JF6 807 aaPredicted RBP6.81□□□□□ -1.32
MSI2-213ENST00000581523 SPAG9O60271 1321 aaKnown RBP6.8□□□□□ -1.32
MSI2-213ENST00000581523 A2MP01023 1474 aa6.8□□□□□ -1.32
MSI2-213ENST00000581523 CAMSAP2Q08AD1 1489 aa6.8□□□□□ -1.32
MSI2-213ENST00000581523 CAMSAP1Q5T5Y3 1602 aa6.8□□□□□ -1.32
MSI2-213ENST00000581523 ATP2B4P23634 1241 aa6.8□□□□□ -1.32
MSI2-213ENST00000581523 HNRNPMP52272 730 aaKnown RBP eCLIP6.8□□□□□ -1.322e-8■■■■■ 37.7
MSI2-213ENST00000581523 SEC13P55735 322 aa6.8□□□□□ -1.32
MSI2-213ENST00000581523 OXLD1Q5BKU9 147 aa6.8□□□□□ -1.32
MSI2-213ENST00000581523 FOXD4L5Q5VV16 416 aaPredicted RBP6.8□□□□□ -1.32
MSI2-213ENST00000581523 FOXD4L4Q8WXT5 416 aaPredicted RBP6.8□□□□□ -1.32
MSI2-213ENST00000581523 ESF1Q9H501 851 aaKnown RBP6.8□□□□□ -1.32
MSI2-213ENST00000581523 KIAA1024Q9UPX6 916 aa6.8□□□□□ -1.32
MSI2-213ENST00000581523 CEP170BQ9Y4F5 1589 aaPredicted RBP6.8□□□□□ -1.32
MSI2-213ENST00000581523 PCDHGA11Q9Y5H2 935 aa6.8□□□□□ -1.32
MSI2-213ENST00000581523 PLEKHH2Q8IVE3 1493 aa6.79□□□□□ -1.32
MSI2-213ENST00000581523 CNTLNQ9NXG0 1405 aa6.79□□□□□ -1.32
MSI2-213ENST00000581523 CCDC102BQ68D86 513 aa6.79□□□□□ -1.32
MSI2-213ENST00000581523 CFDP1Q9UEE9 299 aaPredicted RBP6.79□□□□□ -1.32
MSI2-213ENST00000581523 AMOTL2Q9Y2J4 779 aa6.79□□□□□ -1.32
MSI2-213ENST00000581523 NCOA2Q15596 1464 aa6.79□□□□□ -1.32
MSI2-213ENST00000581523 ZNF644Q9H582 1327 aaPredicted RBP6.78□□□□□ -1.32
MSI2-213ENST00000581523 RBM19Q9Y4C8 960 aaKnown RBP6.78□□□□□ -1.32
MSI2-213ENST00000581523 PCDHB11Q9Y5F2 797 aa6.78□□□□□ -1.32
MSI2-213ENST00000581523 CCDC141Q6ZP82 1450 aa6.78□□□□□ -1.32
MSI2-213ENST00000581523 NCOA1Q15788 1441 aa6.77□□□□□ -1.33
MSI2-213ENST00000581523 KIAA1107Q9UPP5 1409 aa6.77□□□□□ -1.33
MSI2-213ENST00000581523 POLR1AO95602 1720 aaPredicted RBP6.77□□□□□ -1.33
MSI2-213ENST00000581523 ZBTB24O43167 697 aaPredicted RBP6.77□□□□□ -1.33
MSI2-213ENST00000581523 OCLNQ16625 522 aa6.77□□□□□ -1.33
MSI2-213ENST00000581523 TAS1R3Q7RTX0 852 aa6.77□□□□□ -1.33
MSI2-213ENST00000581523 CDAN1Q8IWY9 1227 aa6.77□□□□□ -1.33
MSI2-213ENST00000581523 TPCN2Q8NHX9 752 aa6.77□□□□□ -1.33
MSI2-213ENST00000581523 MAP4K5Q9Y4K4 846 aa6.77□□□□□ -1.33
MSI2-213ENST00000581523 KDM5DQ9BY66 1539 aa6.76□□□□□ -1.33
MSI2-213ENST00000581523 PPEF1O14829 653 aaPredicted RBP6.76□□□□□ -1.33
MSI2-213ENST00000581523 ITGBL1O95965 494 aaPredicted RBP6.76□□□□□ -1.33
MSI2-213ENST00000581523 VARSP26640 1264 aaKnown RBP6.76□□□□□ -1.33
MSI2-213ENST00000581523 WNT7BP56706 349 aa6.76□□□□□ -1.33
MSI2-213ENST00000581523 KCNC4Q03721 635 aa6.76□□□□□ -1.33
MSI2-213ENST00000581523 TRIM32Q13049 653 aa6.76□□□□□ -1.33
MSI2-213ENST00000581523 ANKLE1Q8NAG6 615 aa6.76□□□□□ -1.33
MSI2-213ENST00000581523 KCTD15Q96SI1 283 aaPredicted RBP6.76□□□□□ -1.33
MSI2-213ENST00000581523 MBD5Q9P267 1494 aa6.76□□□□□ -1.33
MSI2-213ENST00000581523 SPATA31D1Q6ZQQ2 1576 aa6.76□□□□□ -1.33
MSI2-213ENST00000581523 CEP152O94986 1710 aa6.76□□□□□ -1.33
MSI2-213ENST00000581523 LTBP4Q8N2S1 1624 aa6.76□□□□□ -1.33
MSI2-213ENST00000581523 NPATQ14207 1427 aa6.76□□□□□ -1.33
MSI2-213ENST00000581523 CROCC2H7BZ55 1655 aa6.75□□□□□ -1.33
MSI2-213ENST00000581523 SOWAHDA6NJG2 315 aa6.75□□□□□ -1.33
MSI2-213ENST00000581523 SFI1A8K8P3 1242 aa6.75□□□□□ -1.33
MSI2-213ENST00000581523 RNF223E7ERA6 249 aa6.75□□□□□ -1.33
MSI2-213ENST00000581523 M0R2N6 131 aa6.75□□□□□ -1.33
MSI2-213ENST00000581523 GGT6Q6P531 493 aa6.75□□□□□ -1.33
MSI2-213ENST00000581523 CXXC1Q9P0U4 656 aaPredicted RBP6.75□□□□□ -1.33
MSI2-213ENST00000581523 PTPRKQ15262 1439 aa6.75□□□□□ -1.33
MSI2-213ENST00000581523 VPS8Q8N3P4 1428 aa6.75□□□□□ -1.33
MSI2-213ENST00000581523 ZMYM3Q14202 1370 aa6.74□□□□□ -1.33
MSI2-213ENST00000581523 PRMT3O60678 531 aa6.74□□□□□ -1.33
MSI2-213ENST00000581523 MYCP01106 439 aaPredicted RBP6.74□□□□□ -1.33
MSI2-213ENST00000581523 GGCXP38435 758 aa6.74□□□□□ -1.33
MSI2-213ENST00000581523 SERPINB4P48594 390 aa6.74□□□□□ -1.33
MSI2-213ENST00000581523 RPIAP49247 311 aa6.74□□□□□ -1.33
MSI2-213ENST00000581523 SKOR1P84550 965 aa6.74□□□□□ -1.33
MSI2-213ENST00000581523 PSME1Q06323 249 aa6.74□□□□□ -1.33
MSI2-213ENST00000581523 PRIMPOLQ96LW4 560 aa6.74□□□□□ -1.33
MSI2-213ENST00000581523 DNMT1P26358 1616 aaKnown RBP6.74□□□□□ -1.33
MSI2-213ENST00000581523 SETD1BQ9UPS6 1966 aaKnown RBP6.74□□□□□ -1.33
MSI2-213ENST00000581523 ARHGEF5Q12774 1597 aa6.74□□□□□ -1.33
MSI2-213ENST00000581523 LRRC9Q6ZRR7 1453 aa6.73□□□□□ -1.33
MSI2-213ENST00000581523 RNF17Q9BXT8 1623 aaKnown RBP6.73□□□□□ -1.33
MSI2-213ENST00000581523 RBM25P49756 843 aaKnown RBP6.73□□□□□ -1.33
MSI2-213ENST00000581523 INTS6LQ5JSJ4 861 aaKnown RBP6.73□□□□□ -1.33
MSI2-213ENST00000581523 PLA2G2CQ5R387 149 aa6.73□□□□□ -1.33
MSI2-213ENST00000581523 ZNF428Q96B54 188 aa6.73□□□□□ -1.33
MSI2-213ENST00000581523 CDK15Q96Q40 435 aa6.73□□□□□ -1.33
MSI2-213ENST00000581523 HCSTQ9UBK5 93 aa6.73□□□□□ -1.33
MSI2-213ENST00000581523 ZC3H13Q5T200 1668 aaKnown RBP6.73□□□□□ -1.33
MSI2-213ENST00000581523 PTPRTO14522 1441 aa6.73□□□□□ -1.33
MSI2-213ENST00000581523 NEURL4Q96JN8 1562 aa6.73□□□□□ -1.33
MSI2-213ENST00000581523 PLA2R1Q13018 1463 aa6.73□□□□□ -1.33
MSI2-213ENST00000581523 ERVH48-1M5A8F1 160 aa6.72□□□□□ -1.33
MSI2-213ENST00000581523 ERCC3P19447 782 aa6.72□□□□□ -1.33
MSI2-213ENST00000581523 WEE1P30291 646 aa6.72□□□□□ -1.33
MSI2-213ENST00000581523 SCNN1AP37088 669 aa6.72□□□□□ -1.33
MSI2-213ENST00000581523 ERVK-9P63128 1117 aa6.72□□□□□ -1.33
MSI2-213ENST00000581523 VASH1Q7L8A9 365 aaPredicted RBP6.72□□□□□ -1.33
MSI2-213ENST00000581523 MPNDQ8N594 471 aa6.72□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms